EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSFDAG00000021192 (Gene tree)
Gene ID: -
Gene Symbol: YBX3
Alias: CSDA|CSDA1|ZONAB|dbpA
Full Name: Y-box binding protein 3
Gene Type: protein_coding
Species: Fukomys_damarensis
Status: putative
Strand: Minus strand
Length: 20437 bases
Position: chrKN123449.1:1262062-1282498
Accession: 104875850
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSFDAP00000022919	CSD	PF00313.22	3.6e-26	1	1
ENSFDAP00000022918	CSD	PF00313.22	4.2e-26	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSFDAT00000009304	YBX3-202	3845	XM_010643586	ENSFDAP00000022918	345 (aa)	XP_010641888	-
ENSFDAT00000009303	YBX3-201	939	-	ENSFDAP00000022919	312 (aa)	-	-

Gene Model

Click here to download ENSFDAG00000021192's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSFDAG00000021192's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSFDAG00000021192	YBX3	92	84.321	ENSG00000060138	YBX3	91	96.429	Homo_sapiens
ENSFDAG00000021192	YBX3	92	87.413	ENSAMEG00000009393	YBX3	81	87.986	Ailuropoda_melanoleuca
ENSFDAG00000021192	YBX3	91	67.018	ENSAPLG00000003147	YBX3	100	67.018	Anas_platyrhynchos
ENSFDAG00000021192	YBX3	56	72.308	ENSANAG00000033366	-	61	80.357	Aotus_nancymaae
ENSFDAG00000021192	YBX3	92	83.624	ENSANAG00000024492	-	91	84.669	Aotus_nancymaae
ENSFDAG00000021192	YBX3	92	86.713	ENSBTAG00000009663	YBX3	76	83.566	Bos_taurus
ENSFDAG00000021192	YBX3	92	83.624	ENSCJAG00000021660	-	78	83.624	Callithrix_jacchus
ENSFDAG00000021192	YBX3	58	84.956	ENSCJAG00000033824	-	69	86.726	Callithrix_jacchus
ENSFDAG00000021192	YBX3	93	86.159	ENSCAFG00000013401	YBX3	87	86.545	Canis_familiaris
ENSFDAG00000021192	YBX3	92	83.217	ENSCAFG00020006412	YBX3	76	83.217	Canis_lupus_dingo
ENSFDAG00000021192	YBX3	92	86.014	ENSCHIG00000010863	YBX3	80	86.014	Capra_hircus
ENSFDAG00000021192	YBX3	92	53.147	ENSTSYG00000035821	-	73	52.448	Carlito_syrichta
ENSFDAG00000021192	YBX3	96	83.946	ENSTSYG00000004204	-	91	84.950	Carlito_syrichta
ENSFDAG00000021192	YBX3	95	89.189	ENSCAPG00000015039	YBX3	96	89.189	Cavia_aperea
ENSFDAG00000021192	YBX3	92	89.510	ENSCPOG00000011329	YBX3	84	89.510	Cavia_porcellus
ENSFDAG00000021192	YBX3	92	82.927	ENSCCAG00000016469	YBX3	77	82.927	Cebus_capucinus
ENSFDAG00000021192	YBX3	92	83.624	ENSCATG00000034411	YBX3	77	84.669	Cercocebus_atys
ENSFDAG00000021192	YBX3	95	91.216	ENSCLAG00000016030	YBX3	97	91.216	Chinchilla_lanigera
ENSFDAG00000021192	YBX3	92	83.972	ENSCSAG00000008744	YBX3	77	85.017	Chlorocebus_sabaeus
ENSFDAG00000021192	YBX3	92	74.216	ENSCPBG00000014147	YBX3	68	100.000	Chrysemys_picta_bellii
ENSFDAG00000021192	YBX3	92	83.624	ENSCANG00000036801	YBX3	91	84.669	Colobus_angolensis_palliatus
ENSFDAG00000021192	YBX3	92	86.014	ENSCGRG00001016148	Ybx3	79	86.014	Cricetulus_griseus_chok1gshd
ENSFDAG00000021192	YBX3	93	84.407	ENSCGRG00000004563	Ybx3	99	84.407	Cricetulus_griseus_crigri
ENSFDAG00000021192	YBX3	91	87.676	ENSDORG00000009103	Ybx3	83	86.735	Dipodomys_ordii
ENSFDAG00000021192	YBX3	91	77.895	ENSETEG00000002557	YBX3	82	83.262	Echinops_telfairi
ENSFDAG00000021192	YBX3	92	81.469	ENSEASG00005014726	YBX3	76	80.769	Equus_asinus_asinus
ENSFDAG00000021192	YBX3	92	84.615	ENSECAG00000013777	YBX3	77	84.615	Equus_caballus
ENSFDAG00000021192	YBX3	91	83.099	ENSEEUG00000010415	YBX3	100	84.155	Erinaceus_europaeus
ENSFDAG00000021192	YBX3	92	84.321	ENSFCAG00000027748	YBX3	77	85.366	Felis_catus
ENSFDAG00000021192	YBX3	91	64.336	ENSFALG00000003661	YBX3	100	63.986	Ficedula_albicollis
ENSFDAG00000021192	YBX3	92	58.419	ENSGALG00000031890	YBX3	68	100.000	Gallus_gallus
ENSFDAG00000021192	YBX3	92	73.171	ENSGAGG00000017780	YBX3	68	100.000	Gopherus_agassizii
ENSFDAG00000021192	YBX3	92	84.321	ENSGGOG00000001352	YBX3	77	85.366	Gorilla_gorilla
ENSFDAG00000021192	YBX3	92	80.345	ENSHGLG00000014798	-	99	72.836	Heterocephalus_glaber_female
ENSFDAG00000021192	YBX3	85	83.083	ENSHGLG00000015495	-	78	81.132	Heterocephalus_glaber_female
ENSFDAG00000021192	YBX3	66	97.917	ENSHGLG00100003589	YBX3	92	64.883	Heterocephalus_glaber_male
ENSFDAG00000021192	YBX3	92	81.818	ENSSTOG00000032577	-	81	81.818	Ictidomys_tridecemlineatus
ENSFDAG00000021192	YBX3	95	78.930	ENSSTOG00000002108	-	97	74.763	Ictidomys_tridecemlineatus
ENSFDAG00000021192	YBX3	92	64.583	ENSJJAG00000014239	Ybx3	83	82.500	Jaculus_jaculus
ENSFDAG00000021192	YBX3	92	86.713	ENSLAFG00000017247	YBX3	86	79.730	Loxodonta_africana
ENSFDAG00000021192	YBX3	92	83.972	ENSMFAG00000039369	YBX3	77	85.017	Macaca_fascicularis
ENSFDAG00000021192	YBX3	92	83.972	ENSMMUG00000022469	YBX3	88	85.017	Macaca_mulatta
ENSFDAG00000021192	YBX3	92	83.972	ENSMNEG00000045109	YBX3	77	85.017	Macaca_nemestrina
ENSFDAG00000021192	YBX3	95	85.085	ENSMLEG00000033618	YBX3	86	83.168	Mandrillus_leucophaeus
ENSFDAG00000021192	YBX3	91	64.912	ENSMGAG00000014224	YBX3	92	100.000	Meleagris_gallopavo
ENSFDAG00000021192	YBX3	92	86.014	ENSMAUG00000012185	Ybx3	78	100.000	Mesocricetus_auratus
ENSFDAG00000021192	YBX3	92	87.413	ENSMICG00000038002	-	77	87.413	Microcebus_murinus
ENSFDAG00000021192	YBX3	75	78.472	ENSMICG00000031459	-	78	56.081	Microcebus_murinus
ENSFDAG00000021192	YBX3	92	85.315	ENSMOCG00000016291	Ybx3	84	97.727	Microtus_ochrogaster
ENSFDAG00000021192	YBX3	97	77.632	ENSMODG00000018248	YBX3	91	78.169	Monodelphis_domestica
ENSFDAG00000021192	YBX3	92	85.315	MGP_CAROLIEiJ_G0028947	Ybx3	79	85.315	Mus_caroli
ENSFDAG00000021192	YBX3	92	85.315	ENSMUSG00000030189	Ybx3	79	85.315	Mus_musculus
ENSFDAG00000021192	YBX3	92	86.014	MGP_PahariEiJ_G0022709	Ybx3	79	86.014	Mus_pahari
ENSFDAG00000021192	YBX3	92	85.664	MGP_SPRETEiJ_G0029994	Ybx3	79	85.664	Mus_spretus
ENSFDAG00000021192	YBX3	92	68.475	ENSMPUG00000011810	YBX3	78	68.475	Mustela_putorius_furo
ENSFDAG00000021192	YBX3	85	84.387	ENSMLUG00000007476	YBX3	100	82.156	Myotis_lucifugus
ENSFDAG00000021192	YBX3	90	80.986	ENSNGAG00000000710	Ybx3	90	56.794	Nannospalax_galili
ENSFDAG00000021192	YBX3	92	81.882	ENSNLEG00000034844	YBX3	81	81.185	Nomascus_leucogenys
ENSFDAG00000021192	YBX3	57	71.751	ENSMEUG00000002507	-	83	72.881	Notamacropus_eugenii
ENSFDAG00000021192	YBX3	92	84.615	ENSODEG00000017957	YBX3	84	84.615	Octodon_degus
ENSFDAG00000021192	YBX3	93	81.100	ENSOCUG00000001889	YBX3	83	81.100	Oryctolagus_cuniculus
ENSFDAG00000021192	YBX3	92	84.983	ENSOGAG00000013245	YBX3	78	84.983	Otolemur_garnettii
ENSFDAG00000021192	YBX3	92	78.322	ENSOARG00000020919	YBX3	97	77.778	Ovis_aries
ENSFDAG00000021192	YBX3	92	84.321	ENSPPAG00000039068	YBX3	80	85.366	Pan_paniscus
ENSFDAG00000021192	YBX3	92	84.669	ENSPPRG00000005859	YBX3	77	84.669	Panthera_pardus
ENSFDAG00000021192	YBX3	91	87.324	ENSPTIG00000005322	YBX3	83	86.735	Panthera_tigris_altaica
ENSFDAG00000021192	YBX3	92	84.321	ENSPTRG00000004681	YBX3	77	85.366	Pan_troglodytes
ENSFDAG00000021192	YBX3	92	83.624	ENSPANG00000010280	YBX3	77	84.669	Papio_anubis
ENSFDAG00000021192	YBX3	62	100.000	ENSPSIG00000009247	YBX3	90	100.000	Pelodiscus_sinensis
ENSFDAG00000021192	YBX3	92	85.664	ENSPEMG00000012132	-	90	85.664	Peromyscus_maniculatus_bairdii
ENSFDAG00000021192	YBX3	64	97.727	ENSPEMG00000010391	-	72	78.667	Peromyscus_maniculatus_bairdii
ENSFDAG00000021192	YBX3	83	77.220	ENSPCIG00000029949	YBX3	93	79.498	Phascolarctos_cinereus
ENSFDAG00000021192	YBX3	92	84.321	ENSPPYG00000004279	YBX3	77	85.366	Pongo_abelii
ENSFDAG00000021192	YBX3	66	87.440	ENSPCAG00000001397	YBX3	70	87.562	Procavia_capensis
ENSFDAG00000021192	YBX3	56	82.857	ENSPCOG00000011663	YBX3	67	82.857	Propithecus_coquereli
ENSFDAG00000021192	YBX3	92	72.822	ENSPVAG00000006740	YBX3	54	89.055	Pteropus_vampyrus
ENSFDAG00000021192	YBX3	92	86.364	ENSRNOG00000005480	Ybx3	67	100.000	Rattus_norvegicus
ENSFDAG00000021192	YBX3	92	83.275	ENSRBIG00000039208	YBX3	79	82.155	Rhinopithecus_bieti
ENSFDAG00000021192	YBX3	92	83.275	ENSRROG00000029638	YBX3	79	82.155	Rhinopithecus_roxellana
ENSFDAG00000021192	YBX3	95	85.085	ENSSBOG00000030573	YBX3	92	80.818	Saimiri_boliviensis_boliviensis
ENSFDAG00000021192	YBX3	91	73.898	ENSSHAG00000003262	YBX3	99	75.254	Sarcophilus_harrisii
ENSFDAG00000021192	YBX3	92	85.366	ENSSSCG00000000633	YBX3	75	86.411	Sus_scrofa
ENSFDAG00000021192	YBX3	91	65.385	ENSTGUG00000012047	YBX3	100	64.685	Taeniopygia_guttata
ENSFDAG00000021192	YBX3	92	85.366	ENSTBEG00000012570	YBX3	84	81.994	Tupaia_belangeri
ENSFDAG00000021192	YBX3	84	78.571	ENSTTRG00000008045	YBX3	100	81.203	Tursiops_truncatus
ENSFDAG00000021192	YBX3	89	84.116	ENSUAMG00000016662	YBX3	100	84.116	Ursus_americanus
ENSFDAG00000021192	YBX3	91	87.676	ENSUMAG00000016118	YBX3	97	86.780	Ursus_maritimus
ENSFDAG00000021192	YBX3	91	65.398	ENSVPAG00000000876	YBX3	100	66.436	Vicugna_pacos
ENSFDAG00000021192	YBX3	89	83.755	ENSVVUG00000004956	YBX3	100	83.755	Vulpes_vulpes
ENSFDAG00000021192	YBX3	62	90.909	ENSXETG00000016239	ybx3	80	53.759	Xenopus_tropicalis