EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSFDAG00000021334 (Gene tree)
Gene ID: 104866845
Gene Symbol: PNLDC1
Alias: FLJ40240|dJ195P10.2
Full Name: PARN like%2C ribonuclease domain containing 1
Gene Type: protein_coding
Species: Fukomys_damarensis
Status: putative
Strand: Minus strand
Length: 19077 bases
Position: chrKN122446.1:1492317-1511393
Accession: 104866845
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSFDAP00000023104	CAF1	PF04857.20	7.5e-78	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSFDAT00000027529	PNLDC1-201	1711	XM_010631054	ENSFDAP00000023104	531 (aa)	XP_010629356	A0A091DDZ7

Gene Model

Click here to download ENSFDAG00000021334's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSFDAG00000021334's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSFDAG00000021334	PNLDC1	99	84.499	ENSG00000146453	PNLDC1	99	84.499	Homo_sapiens
ENSFDAG00000021334	PNLDC1	98	84.008	ENSAMEG00000015371	PNLDC1	99	83.871	Ailuropoda_melanoleuca
ENSFDAG00000021334	PNLDC1	95	58.708	ENSAPLG00000007014	PNLDC1	97	58.708	Anas_platyrhynchos
ENSFDAG00000021334	PNLDC1	99	59.134	ENSACAG00000013667	PNLDC1	99	59.134	Anolis_carolinensis
ENSFDAG00000021334	PNLDC1	100	82.486	ENSANAG00000034713	PNLDC1	100	83.366	Aotus_nancymaae
ENSFDAG00000021334	PNLDC1	95	85.149	ENSBTAG00000015166	PNLDC1	95	85.149	Bos_taurus
ENSFDAG00000021334	PNLDC1	100	82.674	ENSCJAG00000011865	PNLDC1	100	82.674	Callithrix_jacchus
ENSFDAG00000021334	PNLDC1	100	84.746	ENSCAFG00000000740	PNLDC1	100	84.746	Canis_familiaris
ENSFDAG00000021334	PNLDC1	100	82.674	ENSCAFG00020017742	PNLDC1	100	82.674	Canis_lupus_dingo
ENSFDAG00000021334	PNLDC1	100	82.895	ENSCHIG00000003141	PNLDC1	100	82.895	Capra_hircus
ENSFDAG00000021334	PNLDC1	100	82.486	ENSTSYG00000005606	PNLDC1	100	82.486	Carlito_syrichta
ENSFDAG00000021334	PNLDC1	100	70.489	ENSCAPG00000011893	PNLDC1	100	70.489	Cavia_aperea
ENSFDAG00000021334	PNLDC1	100	86.654	ENSCPOG00000019565	PNLDC1	100	86.654	Cavia_porcellus
ENSFDAG00000021334	PNLDC1	100	83.051	ENSCCAG00000026232	PNLDC1	100	83.051	Cebus_capucinus
ENSFDAG00000021334	PNLDC1	100	84.934	ENSCATG00000033196	PNLDC1	100	84.934	Cercocebus_atys
ENSFDAG00000021334	PNLDC1	99	92.642	ENSCLAG00000003228	PNLDC1	99	92.642	Chinchilla_lanigera
ENSFDAG00000021334	PNLDC1	95	84.086	ENSCSAG00000012478	PNLDC1	98	84.086	Chlorocebus_sabaeus
ENSFDAG00000021334	PNLDC1	96	64.648	ENSCPBG00000004050	PNLDC1	100	64.648	Chrysemys_picta_bellii
ENSFDAG00000021334	PNLDC1	95	85.178	ENSCANG00000043076	PNLDC1	97	85.178	Colobus_angolensis_palliatus
ENSFDAG00000021334	PNLDC1	100	63.653	ENSCGRG00001011981	-	99	63.653	Cricetulus_griseus_chok1gshd
ENSFDAG00000021334	PNLDC1	100	80.226	ENSCGRG00001007470	-	99	80.226	Cricetulus_griseus_chok1gshd
ENSFDAG00000021334	PNLDC1	100	80.226	ENSCGRG00000010221	-	99	80.226	Cricetulus_griseus_crigri
ENSFDAG00000021334	PNLDC1	100	66.290	ENSCGRG00000003103	-	99	66.290	Cricetulus_griseus_crigri
ENSFDAG00000021334	PNLDC1	100	81.391	ENSDNOG00000013709	PNLDC1	100	81.391	Dasypus_novemcinctus
ENSFDAG00000021334	PNLDC1	100	78.652	ENSDORG00000011517	Pnldc1	99	85.623	Dipodomys_ordii
ENSFDAG00000021334	PNLDC1	93	73.022	ENSETEG00000007587	PNLDC1	99	73.022	Echinops_telfairi
ENSFDAG00000021334	PNLDC1	100	77.323	ENSEASG00005019029	PNLDC1	100	77.323	Equus_asinus_asinus
ENSFDAG00000021334	PNLDC1	100	84.557	ENSECAG00000012898	PNLDC1	100	84.557	Equus_caballus
ENSFDAG00000021334	PNLDC1	67	78.125	ENSEEUG00000005717	-	86	78.125	Erinaceus_europaeus
ENSFDAG00000021334	PNLDC1	100	84.746	ENSFCAG00000002848	PNLDC1	100	84.746	Felis_catus
ENSFDAG00000021334	PNLDC1	94	58.020	ENSFALG00000012081	PNLDC1	99	58.020	Ficedula_albicollis
ENSFDAG00000021334	PNLDC1	79	58.432	ENSGALG00000011624	PNLDC1	82	58.432	Gallus_gallus
ENSFDAG00000021334	PNLDC1	99	65.094	ENSGAGG00000015276	PNLDC1	100	66.116	Gopherus_agassizii
ENSFDAG00000021334	PNLDC1	100	84.181	ENSGGOG00000014077	PNLDC1	100	84.181	Gorilla_gorilla
ENSFDAG00000021334	PNLDC1	100	95.669	ENSHGLG00000006889	PNLDC1	100	95.669	Heterocephalus_glaber_female
ENSFDAG00000021334	PNLDC1	100	95.669	ENSHGLG00100018275	PNLDC1	100	95.669	Heterocephalus_glaber_male
ENSFDAG00000021334	PNLDC1	99	87.902	ENSSTOG00000005595	PNLDC1	99	87.902	Ictidomys_tridecemlineatus
ENSFDAG00000021334	PNLDC1	99	79.924	ENSJJAG00000009937	Pnldc1	99	79.924	Jaculus_jaculus
ENSFDAG00000021334	PNLDC1	59	81.905	ENSLAFG00000030189	PNLDC1	92	81.905	Loxodonta_africana
ENSFDAG00000021334	PNLDC1	100	84.934	ENSMFAG00000041296	PNLDC1	100	84.934	Macaca_fascicularis
ENSFDAG00000021334	PNLDC1	100	84.934	ENSMMUG00000004181	PNLDC1	100	84.934	Macaca_mulatta
ENSFDAG00000021334	PNLDC1	100	84.746	ENSMNEG00000034271	PNLDC1	100	84.746	Macaca_nemestrina
ENSFDAG00000021334	PNLDC1	100	81.733	ENSMLEG00000044059	PNLDC1	100	81.733	Mandrillus_leucophaeus
ENSFDAG00000021334	PNLDC1	95	59.055	ENSMGAG00000012470	PNLDC1	97	59.055	Meleagris_gallopavo
ENSFDAG00000021334	PNLDC1	99	64.272	ENSMAUG00000012298	Pnldc1	99	64.272	Mesocricetus_auratus
ENSFDAG00000021334	PNLDC1	100	82.486	ENSMICG00000008021	PNLDC1	100	82.486	Microcebus_murinus
ENSFDAG00000021334	PNLDC1	100	85.553	ENSMOCG00000014287	Pnldc1	100	85.553	Microtus_ochrogaster
ENSFDAG00000021334	PNLDC1	99	73.724	ENSMODG00000007420	PNLDC1	99	73.724	Monodelphis_domestica
ENSFDAG00000021334	PNLDC1	100	86.064	MGP_CAROLIEiJ_G0021045	Pnldc1	100	86.064	Mus_caroli
ENSFDAG00000021334	PNLDC1	100	86.441	ENSMUSG00000073460	Pnldc1	100	89.206	Mus_musculus
ENSFDAG00000021334	PNLDC1	100	86.252	MGP_PahariEiJ_G0023361	Pnldc1	100	86.252	Mus_pahari
ENSFDAG00000021334	PNLDC1	100	86.252	MGP_SPRETEiJ_G0021975	Pnldc1	100	86.252	Mus_spretus
ENSFDAG00000021334	PNLDC1	98	85.164	ENSMPUG00000004920	PNLDC1	99	85.009	Mustela_putorius_furo
ENSFDAG00000021334	PNLDC1	100	83.051	ENSMLUG00000000747	PNLDC1	100	83.051	Myotis_lucifugus
ENSFDAG00000021334	PNLDC1	100	86.817	ENSNGAG00000017714	Pnldc1	99	86.817	Nannospalax_galili
ENSFDAG00000021334	PNLDC1	95	83.432	ENSNLEG00000011282	PNLDC1	98	83.432	Nomascus_leucogenys
ENSFDAG00000021334	PNLDC1	60	60.938	ENSMEUG00000011926	-	64	60.938	Notamacropus_eugenii
ENSFDAG00000021334	PNLDC1	54	64.931	ENSMEUG00000014042	-	100	64.931	Notamacropus_eugenii
ENSFDAG00000021334	PNLDC1	79	81.649	ENSOPRG00000003813	PNLDC1	79	81.649	Ochotona_princeps
ENSFDAG00000021334	PNLDC1	100	94.162	ENSODEG00000008047	PNLDC1	100	94.162	Octodon_degus
ENSFDAG00000021334	PNLDC1	99	56.226	ENSOANG00000012199	PNLDC1	99	58.868	Ornithorhynchus_anatinus
ENSFDAG00000021334	PNLDC1	100	83.616	ENSOCUG00000013867	PNLDC1	100	83.616	Oryctolagus_cuniculus
ENSFDAG00000021334	PNLDC1	99	83.932	ENSOGAG00000007331	PNLDC1	100	83.932	Otolemur_garnettii
ENSFDAG00000021334	PNLDC1	100	83.427	ENSOARG00000004585	PNLDC1	100	83.427	Ovis_aries
ENSFDAG00000021334	PNLDC1	100	83.616	ENSPPAG00000026651	PNLDC1	100	83.616	Pan_paniscus
ENSFDAG00000021334	PNLDC1	100	84.369	ENSPPRG00000012854	PNLDC1	100	84.369	Panthera_pardus
ENSFDAG00000021334	PNLDC1	98	81.298	ENSPTIG00000011501	PNLDC1	98	81.298	Panthera_tigris_altaica
ENSFDAG00000021334	PNLDC1	100	83.616	ENSPTRG00000018762	PNLDC1	100	83.616	Pan_troglodytes
ENSFDAG00000021334	PNLDC1	100	84.746	ENSPANG00000022009	PNLDC1	100	84.746	Papio_anubis
ENSFDAG00000021334	PNLDC1	100	86.252	ENSPEMG00000016301	Pnldc1	99	86.252	Peromyscus_maniculatus_bairdii
ENSFDAG00000021334	PNLDC1	83	75.626	ENSPCIG00000023412	PNLDC1	100	75.626	Phascolarctos_cinereus
ENSFDAG00000021334	PNLDC1	100	78.195	ENSPPYG00000017148	PNLDC1	100	78.195	Pongo_abelii
ENSFDAG00000021334	PNLDC1	99	73.396	ENSPCAG00000014169	PNLDC1	99	73.396	Procavia_capensis
ENSFDAG00000021334	PNLDC1	100	82.674	ENSPCOG00000025722	PNLDC1	100	82.674	Propithecus_coquereli
ENSFDAG00000021334	PNLDC1	73	87.532	ENSPVAG00000005325	PNLDC1	73	87.532	Pteropus_vampyrus
ENSFDAG00000021334	PNLDC1	100	85.876	ENSRNOG00000023140	Pnldc1	100	91.250	Rattus_norvegicus
ENSFDAG00000021334	PNLDC1	100	84.746	ENSRBIG00000033806	PNLDC1	100	84.746	Rhinopithecus_bieti
ENSFDAG00000021334	PNLDC1	95	85.573	ENSRROG00000043919	PNLDC1	97	85.573	Rhinopithecus_roxellana
ENSFDAG00000021334	PNLDC1	100	83.427	ENSSBOG00000019135	PNLDC1	100	83.427	Saimiri_boliviensis_boliviensis
ENSFDAG00000021334	PNLDC1	95	75.050	ENSSHAG00000015192	PNLDC1	97	75.050	Sarcophilus_harrisii
ENSFDAG00000021334	PNLDC1	54	64.336	ENSSPUG00000004627	PNLDC1	99	64.732	Sphenodon_punctatus
ENSFDAG00000021334	PNLDC1	96	83.333	ENSSSCG00000004046	PNLDC1	99	83.333	Sus_scrofa
ENSFDAG00000021334	PNLDC1	91	58.932	ENSTGUG00000011418	PNLDC1	99	58.932	Taeniopygia_guttata
ENSFDAG00000021334	PNLDC1	96	74.510	ENSTBEG00000009131	PNLDC1	98	74.510	Tupaia_belangeri
ENSFDAG00000021334	PNLDC1	73	79.275	ENSTTRG00000010409	PNLDC1	73	79.275	Tursiops_truncatus
ENSFDAG00000021334	PNLDC1	98	71.375	ENSUAMG00000015783	PNLDC1	99	71.429	Ursus_americanus
ENSFDAG00000021334	PNLDC1	93	77.445	ENSUMAG00000011903	PNLDC1	99	77.407	Ursus_maritimus
ENSFDAG00000021334	PNLDC1	96	85.519	ENSVVUG00000006586	PNLDC1	99	85.216	Vulpes_vulpes