EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSFDAG00000021342 (Gene tree)
Gene ID: 104851943
Gene Symbol: -
Alias: -
Full Name: heterogeneous nuclear ribonucleoprotein A1
Gene Type: protein_coding
Species: Fukomys_damarensis
Status: putative
Strand: Plus strand
Length: 4832 bases
Position: chrKN124398.1:1612605-1617436
Accession: 104851943
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSFDAP00000023116	RRM_1	PF00076.22	1.5e-36	1	2
ENSFDAP00000023116	RRM_1	PF00076.22	1.5e-36	2	2
ENSFDAP00000023115	RRM_1	PF00076.22	2.4e-36	1	2
ENSFDAP00000023115	RRM_1	PF00076.22	2.4e-36	2	2
ENSFDAP00000023115	HnRNPA1	PF11627.8	8e-19	1	1
ENSFDAP00000023116	HnRNPA1	PF11627.8	1.7e-18	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSFDAT00000008969	-	1391	XM_010609376	ENSFDAP00000023116	320 (aa)	XP_010607678	UPI0003502986
ENSFDAT00000008972	-	1233	-	ENSFDAP00000023115	373 (aa)	-	UPI0003500884

Gene Model

Click here to download ENSFDAG00000021342's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSFDAG00000021342's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSFDAG00000021342	-	62	77.852	ENSFDAG00000020873	-	52	80.916
ENSFDAG00000021342	-	55	38.235	ENSFDAG00000000851	-	64	38.235
ENSFDAG00000021342	-	57	67.213	ENSFDAG00000018739	-	79	64.651
ENSFDAG00000021342	-	57	44.118	ENSFDAG00000007958	HNRNPD	50	43.860
ENSFDAG00000021342	-	61	85.714	ENSFDAG00000006685	HNRNPA3	95	80.000
ENSFDAG00000021342	-	88	59.394	ENSFDAG00000000331	-	79	58.416
ENSFDAG00000021342	-	59	30.323	ENSFDAG00000008291	PABPC1L	59	30.323
ENSFDAG00000021342	-	62	91.071	ENSFDAG00000009166	-	82	88.525
ENSFDAG00000021342	-	61	76.923	ENSFDAG00000010106	-	95	63.754
ENSFDAG00000021342	-	57	59.551	ENSFDAG00000019780	HNRNPA0	74	59.551
ENSFDAG00000021342	-	86	71.014	ENSFDAG00000000793	HNRNPA2B1	93	67.586
ENSFDAG00000021342	-	52	68.718	ENSFDAG00000014067	-	85	61.168
ENSFDAG00000021342	-	59	41.758	ENSFDAG00000016118	MSI2	54	43.023
ENSFDAG00000021342	-	87	54.286	ENSFDAG00000009547	-	78	54.861
ENSFDAG00000021342	-	55	40.000	ENSFDAG00000016490	HNRNPAB	71	40.000
ENSFDAG00000021342	-	70	44.737	ENSFDAG00000002848	CIRBP	50	41.860

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSFDAG00000021342	-	87	71.786	ENSAMEG00000002186	-	100	70.139	Ailuropoda_melanoleuca
ENSFDAG00000021342	-	92	85.484	ENSANAG00000031918	-	100	85.484	Aotus_nancymaae
ENSFDAG00000021342	-	94	86.667	ENSCAFG00000017180	-	94	86.667	Canis_familiaris
ENSFDAG00000021342	-	100	85.714	ENSCAFG00000006327	-	100	88.509	Canis_familiaris
ENSFDAG00000021342	-	87	87.770	ENSCHIG00000020351	-	92	88.316	Capra_hircus
ENSFDAG00000021342	-	94	61.130	ENSDNOG00000039534	-	93	61.000	Dasypus_novemcinctus
ENSFDAG00000021342	-	100	77.358	ENSDNOG00000030945	-	100	59.248	Dasypus_novemcinctus
ENSFDAG00000021342	-	94	71.854	ENSDNOG00000048335	-	94	72.517	Dasypus_novemcinctus
ENSFDAG00000021342	-	100	99.062	ENSDORG00000027821	-	100	99.062	Dipodomys_ordii
ENSFDAG00000021342	-	88	72.500	ENSETEG00000010244	-	86	72.500	Echinops_telfairi
ENSFDAG00000021342	-	67	64.651	ENSETEG00000004129	-	69	66.667	Echinops_telfairi
ENSFDAG00000021342	-	100	100.000	ENSHGLG00000003139	HNRNPA1	100	100.000	Heterocephalus_glaber_female
ENSFDAG00000021342	-	100	100.000	ENSHGLG00100015974	HNRNPA1	100	100.000	Heterocephalus_glaber_male
ENSFDAG00000021342	-	68	100.000	ENSHGLG00100017719	-	94	77.627	Heterocephalus_glaber_male
ENSFDAG00000021342	-	80	77.043	ENSSTOG00000034519	-	80	77.043	Ictidomys_tridecemlineatus
ENSFDAG00000021342	-	100	67.560	ENSMNEG00000038539	-	97	60.282	Macaca_nemestrina
ENSFDAG00000021342	-	78	74.597	ENSMPUG00000008269	-	69	79.121	Mustela_putorius_furo
ENSFDAG00000021342	-	99	70.461	ENSMPUG00000003127	-	64	82.407	Mustela_putorius_furo
ENSFDAG00000021342	-	90	69.461	ENSNLEG00000032512	-	95	70.115	Nomascus_leucogenys
ENSFDAG00000021342	-	61	97.938	ENSOCUG00000028124	-	52	98.942	Oryctolagus_cuniculus
ENSFDAG00000021342	-	88	71.731	ENSPTIG00000013949	-	92	71.731	Panthera_tigris_altaica
ENSFDAG00000021342	-	60	93.960	ENSPANG00000017095	-	100	86.545	Papio_anubis
ENSFDAG00000021342	-	53	89.899	ENSSFOG00015007588	-	91	71.037	Scleropages_formosus
ENSFDAG00000021342	-	95	60.518	ENSTBEG00000007607	-	72	70.732	Tupaia_belangeri
ENSFDAG00000021342	-	89	90.210	ENSTBEG00000012511	-	100	90.210	Tupaia_belangeri