EuRBPDB

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  • Description
  • RBDs
  • Transcripts
  • Gene Model
  • PPI
  • Paralogs
  • Orthologs
Description
Ensembl ID
ENSFDAG00000021361 (Gene tree)
Gene ID
104853088
Gene Symbol
PRDM5
Alias
PFM2
Full Name
PR/SET domain 5
Gene Type
protein_coding
Species
Fukomys_damarensis
Status
putative
Strand
Minus strand
Length
193918 bases
Position
chrKN121273.1:1973921-2167838
Accession
104853088
RBP type
canonical RBP
Summary
-
RNA binding domains(RBDs)
Protein IDDomain Pfam IDE-value Domain number Total number
ENSFDAP00000023139zf-C2H2PF00096.268e-61110
ENSFDAP00000023139zf-C2H2PF00096.268e-61210
ENSFDAP00000023139zf-C2H2PF00096.268e-61310
ENSFDAP00000023139zf-C2H2PF00096.268e-61410
ENSFDAP00000023139zf-C2H2PF00096.268e-61510
ENSFDAP00000023139zf-C2H2PF00096.268e-61610
ENSFDAP00000023139zf-C2H2PF00096.268e-61710
ENSFDAP00000023139zf-C2H2PF00096.268e-61810
ENSFDAP00000023139zf-C2H2PF00096.268e-61910
ENSFDAP00000023139zf-C2H2PF00096.268e-611010
ENSFDAP00000023140zf-C2H2PF00096.261.1e-49110
ENSFDAP00000023140zf-C2H2PF00096.261.1e-49210
ENSFDAP00000023140zf-C2H2PF00096.261.1e-49310
ENSFDAP00000023140zf-C2H2PF00096.261.1e-49410
ENSFDAP00000023140zf-C2H2PF00096.261.1e-49510
ENSFDAP00000023140zf-C2H2PF00096.261.1e-49610
ENSFDAP00000023140zf-C2H2PF00096.261.1e-49710
ENSFDAP00000023140zf-C2H2PF00096.261.1e-49810
ENSFDAP00000023140zf-C2H2PF00096.261.1e-49910
ENSFDAP00000023140zf-C2H2PF00096.261.1e-491010
ENSFDAP00000023142zf-C2H2PF00096.261.6e-4316
ENSFDAP00000023142zf-C2H2PF00096.261.6e-4326
ENSFDAP00000023142zf-C2H2PF00096.261.6e-4336
ENSFDAP00000023142zf-C2H2PF00096.261.6e-4346
ENSFDAP00000023142zf-C2H2PF00096.261.6e-4356
ENSFDAP00000023142zf-C2H2PF00096.261.6e-4366
ENSFDAP00000023141zf-C2H2PF00096.264.2e-2715
ENSFDAP00000023141zf-C2H2PF00096.264.2e-2725
ENSFDAP00000023141zf-C2H2PF00096.264.2e-2735
ENSFDAP00000023141zf-C2H2PF00096.264.2e-2745
ENSFDAP00000023141zf-C2H2PF00096.264.2e-2755
ENSFDAP00000023142zf-metPF12874.71.6e-1913
ENSFDAP00000023142zf-metPF12874.71.6e-1923
ENSFDAP00000023142zf-metPF12874.71.6e-1933
ENSFDAP00000023139zf-metPF12874.71.7e-1813
ENSFDAP00000023139zf-metPF12874.71.7e-1823
ENSFDAP00000023139zf-metPF12874.71.7e-1833
ENSFDAP00000023140zf-metPF12874.71.7e-1613
ENSFDAP00000023140zf-metPF12874.71.7e-1623
ENSFDAP00000023140zf-metPF12874.71.7e-1633
Transcripts
Transcript IDNameLengthRefSeq ID Protein IDLengthRefSeq IDUniportKB ID
ENSFDAT00000008922PRDM5-2021731XM_010610944ENSFDAP00000023142501 (aa)XP_010609246UPI00053FEE4F
ENSFDAT00000008917PRDM5-2011248-ENSFDAP00000023140415 (aa)--
ENSFDAT00000008924PRDM5-203666-ENSFDAP00000023141221 (aa)--
ENSFDAT00000008925PRDM5-2042502XM_010610928ENSFDAP00000023139599 (aa)XP_010609230A0A091E268
Gene Model
Click here to download ENSFDAG00000021361's gene model file
Protein-Protein Interaction (PPI)

Clik here to download ENSFDAG00000021361's network
Paralogs
Ensembl IDGene SymbolCoverageIdentiy ParalogGene SymbolCoverageIdentiy
ENSFDAG00000021361PRDM57540.367ENSFDAG00000014929ZIC36439.815
ENSFDAG00000021361PRDM58840.566ENSFDAG00000016560ZNF5219340.566
ENSFDAG00000021361PRDM57630.508ENSFDAG00000013867ZNF6466934.884
ENSFDAG00000021361PRDM56538.667ENSFDAG00000008730OVOL28441.096
ENSFDAG00000021361PRDM59836.264ENSFDAG00000017311PRDM105031.892
ENSFDAG00000021361PRDM58148.980ENSFDAG00000015590ZNF2356748.980
ENSFDAG00000021361PRDM59331.863ENSFDAG00000010904ZBTB416034.058
ENSFDAG00000021361PRDM59447.312ENSFDAG00000020138-8141.016
ENSFDAG00000021361PRDM58441.284ENSFDAG00000006720WT18741.284
ENSFDAG00000021361PRDM59137.389ENSFDAG00000008114ZNF819337.389
ENSFDAG00000021361PRDM57434.252ENSFDAG00000016582ZNF3985634.021
ENSFDAG00000021361PRDM57437.736ENSFDAG00000012603ZNF4239833.014
ENSFDAG00000021361PRDM57146.377ENSFDAG00000015190-8639.286
ENSFDAG00000021361PRDM56942.157ENSFDAG00000016958SNAI25740.876
ENSFDAG00000021361PRDM59143.137ENSFDAG00000005851SNAI15443.137
ENSFDAG00000021361PRDM57341.860ENSFDAG00000010852-9441.860
ENSFDAG00000021361PRDM59541.196ENSFDAG00000010369-8347.101
ENSFDAG00000021361PRDM56751.408ENSFDAG00000008687-9051.408
ENSFDAG00000021361PRDM57243.885ENSFDAG00000006075-10044.211
ENSFDAG00000021361PRDM57344.231ENSFDAG00000003974ZNF5748630.556
ENSFDAG00000021361PRDM57836.441ENSFDAG00000010005ZFP647736.441
ENSFDAG00000021361PRDM57330.286ENSFDAG00000019879ZNF5267730.418
ENSFDAG00000021361PRDM57939.535ENSFDAG00000005609-6646.043
ENSFDAG00000021361PRDM58846.739ENSFDAG00000007103ZNF2367646.602
ENSFDAG00000021361PRDM57536.250ENSFDAG00000018453ZBTB128536.250
ENSFDAG00000021361PRDM58441.234ENSFDAG00000009594-7447.887
ENSFDAG00000021361PRDM57334.375ENSFDAG00000019359-8335.593
ENSFDAG00000021361PRDM57140.714ENSFDAG00000020159ZNF3198840.278
ENSFDAG00000021361PRDM57944.311ENSFDAG00000008549ZNF26944.311
ENSFDAG00000021361PRDM58036.296ENSFDAG00000008733SCRT18936.296
ENSFDAG00000021361PRDM56951.181ENSFDAG00000005159-5251.181
ENSFDAG00000021361PRDM57444.615ENSFDAG00000019296-9946.018
ENSFDAG00000021361PRDM57431.353ENSFDAG00000016841GTF3A8836.301
ENSFDAG00000021361PRDM57837.063ENSFDAG00000013872ZIC17937.063
Orthologs
Ensembl IDGene SymbolCoverageIdentiy OrthologGene SymbolCoverageIdentiy Species
ENSFDAG00000021361PRDM510099.051ENSG00000138738PRDM510099.051Homo_sapiens
ENSFDAG00000021361PRDM510088.667ENSAPOG00000023220prdm510088.667Acanthochromis_polyacanthus
ENSFDAG00000021361PRDM58791.509ENSAMEG00000003050PRDM510091.509Ailuropoda_melanoleuca
ENSFDAG00000021361PRDM510088.667ENSACIG00000000406prdm510088.667Amphilophus_citrinellus
ENSFDAG00000021361PRDM510088.667ENSAOCG00000014806prdm510088.667Amphiprion_ocellaris
ENSFDAG00000021361PRDM59678.306ENSAPEG00000016846prdm59978.557Amphiprion_percula
ENSFDAG00000021361PRDM510088.667ENSATEG00000013829prdm510088.667Anabas_testudineus
ENSFDAG00000021361PRDM59389.557ENSAPLG00000013828PRDM510089.557Anas_platyrhynchos
ENSFDAG00000021361PRDM510089.557ENSACAG00000012999PRDM510089.557Anolis_carolinensis
ENSFDAG00000021361PRDM510099.095ENSANAG00000027411PRDM510099.095Aotus_nancymaae
ENSFDAG00000021361PRDM510088.667ENSACLG00000017996prdm510088.667Astatotilapia_calliptera
ENSFDAG00000021361PRDM58187.658ENSAMXG00000041864prdm58788.782Astyanax_mexicanus
ENSFDAG00000021361PRDM510098.101ENSBTAG00000012111PRDM510098.101Bos_taurus
ENSFDAG00000021361PRDM510098.795ENSCJAG00000003133PRDM510098.795Callithrix_jacchus
ENSFDAG00000021361PRDM58798.492ENSCAFG00000004179PRDM59698.492Canis_familiaris
ENSFDAG00000021361PRDM510098.734ENSCAFG00020017685PRDM510098.734Canis_lupus_dingo
ENSFDAG00000021361PRDM510097.785ENSCHIG00000018772PRDM510097.785Capra_hircus
ENSFDAG00000021361PRDM59495.136ENSTSYG00000009630PRDM59597.710Carlito_syrichta
ENSFDAG00000021361PRDM59890.420ENSCAPG00000015217PRDM510099.474Cavia_aperea
ENSFDAG00000021361PRDM59599.051ENSCPOG00000012883PRDM510099.474Cavia_porcellus
ENSFDAG00000021361PRDM510099.095ENSCCAG00000023157PRDM510099.095Cebus_capucinus
ENSFDAG00000021361PRDM510099.277ENSCATG00000042510PRDM510099.277Cercocebus_atys
ENSFDAG00000021361PRDM59599.367ENSCLAG00000005392PRDM510099.474Chinchilla_lanigera
ENSFDAG00000021361PRDM510098.667ENSCSAG00000003729PRDM510099.051Chlorocebus_sabaeus
ENSFDAG00000021361PRDM59998.000ENSCHOG00000007801PRDM58998.000Choloepus_hoffmanni
ENSFDAG00000021361PRDM510089.873ENSCPBG00000024735PRDM510089.873Chrysemys_picta_bellii
ENSFDAG00000021361PRDM510099.277ENSCANG00000036807PRDM510099.277Colobus_angolensis_palliatus
ENSFDAG00000021361PRDM510098.101ENSCGRG00001010581Prdm510098.072Cricetulus_griseus_chok1gshd
ENSFDAG00000021361PRDM58896.667ENSCGRG00000010996-9998.155Cricetulus_griseus_crigri
ENSFDAG00000021361PRDM510088.000ENSCSEG00000019979prdm510088.000Cynoglossus_semilaevis
ENSFDAG00000021361PRDM510088.667ENSCVAG00000013692prdm510088.667Cyprinodon_variegatus
ENSFDAG00000021361PRDM59890.411ENSDARG00000006288prdm59987.821Danio_rerio
ENSFDAG00000021361PRDM58797.792ENSDNOG00000002009PRDM510097.792Dasypus_novemcinctus
ENSFDAG00000021361PRDM510097.785ENSDORG00000007739Prdm510097.349Dipodomys_ordii
ENSFDAG00000021361PRDM59394.203ENSETEG00000020268PRDM59088.189Echinops_telfairi
ENSFDAG00000021361PRDM59989.262ENSEBUG00000004301prdm510089.262Eptatretus_burgeri
ENSFDAG00000021361PRDM510098.795ENSEASG00005018365PRDM510098.795Equus_asinus_asinus
ENSFDAG00000021361PRDM510087.019ENSECAG00000024747-10087.019Equus_caballus
ENSFDAG00000021361PRDM59997.826ENSECAG00000011516PRDM59097.826Equus_caballus
ENSFDAG00000021361PRDM59995.833ENSEEUG00000010306PRDM510095.833Erinaceus_europaeus
ENSFDAG00000021361PRDM59891.803ENSELUG00000005894prdm59388.546Esox_lucius
ENSFDAG00000021361PRDM510098.418ENSFCAG00000025656PRDM510098.418Felis_catus
ENSFDAG00000021361PRDM59772.897ENSFALG00000008381PRDM510072.897Ficedula_albicollis
ENSFDAG00000021361PRDM59890.411ENSFHEG00000013040prdm59990.411Fundulus_heteroclitus
ENSFDAG00000021361PRDM59791.176ENSGMOG00000012038prdm510091.667Gadus_morhua
ENSFDAG00000021361PRDM510089.333ENSGALG00000011963PRDM510089.333Gallus_gallus
ENSFDAG00000021361PRDM59891.803ENSGAFG00000019233prdm59588.546Gambusia_affinis
ENSFDAG00000021361PRDM59891.803ENSGAGG00000020362PRDM59991.803Gopherus_agassizii
ENSFDAG00000021361PRDM510099.277ENSGGOG00000013562PRDM510099.277Gorilla_gorilla
ENSFDAG00000021361PRDM510088.667ENSHBUG00000023375prdm510088.667Haplochromis_burtoni
ENSFDAG00000021361PRDM59698.990ENSHGLG00000003010PRDM59998.990Heterocephalus_glaber_female
ENSFDAG00000021361PRDM510099.548ENSHGLG00100003696PRDM510099.548Heterocephalus_glaber_male
ENSFDAG00000021361PRDM510088.291ENSHCOG00000012131prdm59988.571Hippocampus_comes
ENSFDAG00000021361PRDM59892.708ENSIPUG00000001248prdm510088.667Ictalurus_punctatus
ENSFDAG00000021361PRDM59594.620ENSSTOG00000004741PRDM510096.316Ictidomys_tridecemlineatus
ENSFDAG00000021361PRDM59598.734ENSJJAG00000011464Prdm510098.667Jaculus_jaculus
ENSFDAG00000021361PRDM510088.000ENSKMAG00000013663prdm510088.000Kryptolebias_marmoratus
ENSFDAG00000021361PRDM510088.667ENSLBEG00000022736prdm510088.667Labrus_bergylta
ENSFDAG00000021361PRDM58789.873ENSLACG00000009187PRDM59989.873Latimeria_chalumnae
ENSFDAG00000021361PRDM59989.262ENSLOCG00000009778prdm59989.262Lepisosteus_oculatus
ENSFDAG00000021361PRDM510097.333ENSLAFG00000006532PRDM510098.418Loxodonta_africana
ENSFDAG00000021361PRDM510099.277ENSMFAG00000045845PRDM510099.277Macaca_fascicularis
ENSFDAG00000021361PRDM510099.277ENSMMUG00000003249PRDM510099.277Macaca_mulatta
ENSFDAG00000021361PRDM510099.277ENSMNEG00000019018PRDM510099.277Macaca_nemestrina
ENSFDAG00000021361PRDM59399.051ENSMLEG00000023145PRDM510099.051Mandrillus_leucophaeus
ENSFDAG00000021361PRDM510088.000ENSMAMG00000013419prdm510088.000Mastacembelus_armatus
ENSFDAG00000021361PRDM510088.667ENSMZEG00005020645prdm510088.667Maylandia_zebra
ENSFDAG00000021361PRDM59389.241ENSMGAG00000010710PRDM510089.241Meleagris_gallopavo
ENSFDAG00000021361PRDM510097.831ENSMAUG00000006768Prdm510097.831Mesocricetus_auratus
ENSFDAG00000021361PRDM510099.333ENSMICG00000001459PRDM510099.333Microcebus_murinus
ENSFDAG00000021361PRDM510098.101ENSMOCG00000016267Prdm510098.101Microtus_ochrogaster
ENSFDAG00000021361PRDM510088.667ENSMMOG00000006035prdm510088.667Mola_mola
ENSFDAG00000021361PRDM510088.667ENSMODG00000018942PRDM510088.667Monodelphis_domestica
ENSFDAG00000021361PRDM510088.667ENSMALG00000013934prdm510088.667Monopterus_albus
ENSFDAG00000021361PRDM510098.418MGP_CAROLIEiJ_G0028463Prdm510098.418Mus_caroli
ENSFDAG00000021361PRDM510098.101ENSMUSG00000029913Prdm510098.101Mus_musculus
ENSFDAG00000021361PRDM510098.418MGP_PahariEiJ_G0022203Prdm510098.418Mus_pahari
ENSFDAG00000021361PRDM510098.101MGP_SPRETEiJ_G0029467Prdm510098.101Mus_spretus
ENSFDAG00000021361PRDM510098.101ENSMPUG00000017415PRDM510098.101Mustela_putorius_furo
ENSFDAG00000021361PRDM58790.312ENSMLUG00000006097PRDM510090.312Myotis_lucifugus
ENSFDAG00000021361PRDM510098.101ENSNGAG00000018317Prdm510097.590Nannospalax_galili
ENSFDAG00000021361PRDM59679.132ENSNBRG00000004976prdm510080.503Neolamprologus_brichardi
ENSFDAG00000021361PRDM510099.277ENSNLEG00000009107PRDM510099.277Nomascus_leucogenys
ENSFDAG00000021361PRDM59089.831ENSMEUG00000006576-7189.831Notamacropus_eugenii
ENSFDAG00000021361PRDM59595.817ENSOPRG00000011066-60100.000Ochotona_princeps
ENSFDAG00000021361PRDM59999.684ENSODEG00000009133PRDM510099.333Octodon_degus
ENSFDAG00000021361PRDM510088.667ENSONIG00000003111prdm59987.975Oreochromis_niloticus
ENSFDAG00000021361PRDM57586.667ENSOANG00000006197-10086.667Ornithorhynchus_anatinus
ENSFDAG00000021361PRDM59990.452ENSOANG00000015109PRDM59790.909Ornithorhynchus_anatinus
ENSFDAG00000021361PRDM58887.898ENSOCUG00000013454PRDM510087.342Oryctolagus_cuniculus
ENSFDAG00000021361PRDM510088.667ENSORLG00000016247prdm510088.667Oryzias_latipes
ENSFDAG00000021361PRDM510088.667ENSORLG00020018051prdm510088.667Oryzias_latipes_hni
ENSFDAG00000021361PRDM510088.667ENSORLG00015013760prdm510088.667Oryzias_latipes_hsok
ENSFDAG00000021361PRDM510088.667ENSOMEG00000005143prdm510088.667Oryzias_melastigma
ENSFDAG00000021361PRDM57699.333ENSOGAG00000009996PRDM59299.333Otolemur_garnettii
ENSFDAG00000021361PRDM59197.368ENSOARG00000015473PRDM510098.485Ovis_aries
ENSFDAG00000021361PRDM59399.051ENSPPAG00000043045PRDM510099.051Pan_paniscus
ENSFDAG00000021361PRDM510098.418ENSPPRG00000001020PRDM510098.418Panthera_pardus
ENSFDAG00000021361PRDM59398.418ENSPTIG00000010807PRDM59598.418Panthera_tigris_altaica
ENSFDAG00000021361PRDM510099.277ENSPTRG00000016403PRDM510099.277Pan_troglodytes
ENSFDAG00000021361PRDM510099.277ENSPANG00000023612PRDM510099.277Papio_anubis
ENSFDAG00000021361PRDM510087.288ENSPKIG00000015492prdm510087.288Paramormyrops_kingsleyae
ENSFDAG00000021361PRDM510089.873ENSPSIG00000013505PRDM510089.873Pelodiscus_sinensis
ENSFDAG00000021361PRDM510088.000ENSPMGG00000012622prdm510088.000Periophthalmus_magnuspinnatus
ENSFDAG00000021361PRDM56790.722ENSPMAG00000005248prdm510090.722Petromyzon_marinus
ENSFDAG00000021361PRDM59877.005ENSPFOG00000018630prdm59977.540Poecilia_formosa
ENSFDAG00000021361PRDM510088.667ENSPLAG00000014148prdm510087.975Poecilia_latipinna
ENSFDAG00000021361PRDM510088.667ENSPMEG00000018002prdm510088.667Poecilia_mexicana
ENSFDAG00000021361PRDM510088.667ENSPREG00000018366prdm510088.667Poecilia_reticulata
ENSFDAG00000021361PRDM510099.051ENSPPYG00000015031PRDM510099.051Pongo_abelii
ENSFDAG00000021361PRDM58897.333ENSPCAG00000011671PRDM59697.333Procavia_capensis
ENSFDAG00000021361PRDM510099.333ENSPCOG00000022828PRDM510099.333Propithecus_coquereli
ENSFDAG00000021361PRDM59394.304ENSPVAG00000012309PRDM510094.304Pteropus_vampyrus
ENSFDAG00000021361PRDM510088.667ENSPNYG00000012194prdm510088.667Pundamilia_nyererei
ENSFDAG00000021361PRDM58983.974ENSPNAG00000023191-9786.301Pygocentrus_nattereri
ENSFDAG00000021361PRDM59890.411ENSPNAG00000026181prdm59988.782Pygocentrus_nattereri
ENSFDAG00000021361PRDM59992.933ENSRNOG00000023679Prdm59992.933Rattus_norvegicus
ENSFDAG00000021361PRDM510099.277ENSRBIG00000041307PRDM510099.277Rhinopithecus_bieti
ENSFDAG00000021361PRDM58893.210ENSRROG00000035343PRDM59693.210Rhinopithecus_roxellana
ENSFDAG00000021361PRDM510098.795ENSSBOG00000022100PRDM510098.795Saimiri_boliviensis_boliviensis
ENSFDAG00000021361PRDM58590.164ENSSHAG00000003250PRDM59990.164Sarcophilus_harrisii
ENSFDAG00000021361PRDM510089.333ENSSFOG00015020478prdm510089.333Scleropages_formosus
ENSFDAG00000021361PRDM510088.667ENSSMAG00000018844prdm510088.667Scophthalmus_maximus
ENSFDAG00000021361PRDM59991.803ENSSDUG00000020397prdm510088.667Seriola_dumerili
ENSFDAG00000021361PRDM59992.784ENSSLDG00000013353prdm510088.667Seriola_lalandi_dorsalis
ENSFDAG00000021361PRDM593100.000ENSSARG00000014129-6897.436Sorex_araneus
ENSFDAG00000021361PRDM510090.498ENSSPUG00000009941PRDM510090.498Sphenodon_punctatus
ENSFDAG00000021361PRDM510088.667ENSSPAG00000013866prdm510087.658Stegastes_partitus
ENSFDAG00000021361PRDM510098.734ENSSSCG00000009101PRDM510098.734Sus_scrofa
ENSFDAG00000021361PRDM59389.557ENSTGUG00000001920PRDM510089.557Taeniopygia_guttata
ENSFDAG00000021361PRDM510088.667ENSTRUG00000013850prdm510088.667Takifugu_rubripes
ENSFDAG00000021361PRDM510074.834ENSTNIG00000005901prdm510070.189Tetraodon_nigroviridis
ENSFDAG00000021361PRDM590100.000ENSTBEG00000015386PRDM585100.000Tupaia_belangeri
ENSFDAG00000021361PRDM510098.101ENSTTRG00000010996PRDM510098.101Tursiops_truncatus
ENSFDAG00000021361PRDM59396.581ENSUAMG00000009994PRDM58496.581Ursus_americanus
ENSFDAG00000021361PRDM59598.734ENSUMAG00000003733PRDM59998.958Ursus_maritimus
ENSFDAG00000021361PRDM59781.536ENSVPAG00000007435PRDM510082.000Vicugna_pacos
ENSFDAG00000021361PRDM59098.734ENSVVUG00000013192PRDM510098.734Vulpes_vulpes
ENSFDAG00000021361PRDM510082.278ENSXETG00000002101prdm510082.278Xenopus_tropicalis
ENSFDAG00000021361PRDM510088.667ENSXCOG00000008567prdm510088.667Xiphophorus_couchianus
ENSFDAG00000021361PRDM59891.803ENSXMAG00000013825prdm510088.667Xiphophorus_maculatus

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