EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSFDAG00000021541 (Gene tree)
Gene ID: 104870099
Gene Symbol: RAB5C
Alias: RAB5CL|RABL
Full Name: RAB5C%2C member RAS oncogene family
Gene Type: protein_coding
Species: Fukomys_damarensis
Status: putative
Strand: Minus strand
Length: 14571 bases
Position: chrKN122754.1:518783-533353
Accession: 104870099
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSFDAP00000023394	MMR_HSR1	PF01926.23	7.9e-05	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSFDAT00000008514	RAB5C-201	2914	XM_010635500	ENSFDAP00000023394	216 (aa)	XP_010633802	UPI00053F531B

Gene Model

Click here to download ENSFDAG00000021541's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSFDAG00000021541's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSFDAG00000021541	RAB5C	77	32.934	ENSFDAG00000000107	KRAS	90	32.164
ENSFDAG00000021541	RAB5C	87	32.828	ENSFDAG00000013013	RAB36	74	32.828
ENSFDAG00000021541	RAB5C	72	33.121	ENSFDAG00000020602	RHEB	85	33.121
ENSFDAG00000021541	RAB5C	94	39.320	ENSFDAG00000010948	-	98	39.320
ENSFDAG00000021541	RAB5C	71	34.641	ENSFDAG00000002113	-	67	34.641
ENSFDAG00000021541	RAB5C	90	42.233	ENSFDAG00000019872	RAB11B	94	42.233
ENSFDAG00000021541	RAB5C	75	35.976	ENSFDAG00000014725	RAB39B	77	35.976
ENSFDAG00000021541	RAB5C	81	39.444	ENSFDAG00000016833	RAB33B	78	39.444
ENSFDAG00000021541	RAB5C	89	36.318	ENSFDAG00000014776	RAB9B	97	36.318
ENSFDAG00000021541	RAB5C	73	32.500	ENSFDAG00000016178	RAB34	62	32.500
ENSFDAG00000021541	RAB5C	86	39.247	ENSFDAG00000007443	RAB14	87	39.247
ENSFDAG00000021541	RAB5C	89	42.784	ENSFDAG00000010180	-	96	42.784
ENSFDAG00000021541	RAB5C	78	42.604	ENSFDAG00000014521	RAB30	83	42.604
ENSFDAG00000021541	RAB5C	89	34.848	ENSFDAG00000006951	RAB9A	97	34.848
ENSFDAG00000021541	RAB5C	57	42.742	ENSFDAG00000014469	-	94	42.742
ENSFDAG00000021541	RAB5C	75	31.288	ENSFDAG00000021405	NRAS	85	31.288
ENSFDAG00000021541	RAB5C	90	41.827	ENSFDAG00000021495	RAB11A	94	41.827
ENSFDAG00000021541	RAB5C	77	31.579	ENSFDAG00000007662	RERG	84	31.579
ENSFDAG00000021541	RAB5C	100	84.259	ENSFDAG00000005631	-	100	84.259
ENSFDAG00000021541	RAB5C	97	84.689	ENSFDAG00000008326	RAB5B	97	84.689
ENSFDAG00000021541	RAB5C	94	41.748	ENSFDAG00000015285	RAB37	93	41.748
ENSFDAG00000021541	RAB5C	80	33.146	ENSFDAG00000006760	HRAS	93	33.146
ENSFDAG00000021541	RAB5C	94	41.463	ENSFDAG00000005525	RAB6B	98	41.463
ENSFDAG00000021541	RAB5C	75	40.361	ENSFDAG00000008571	RAB33A	70	40.361
ENSFDAG00000021541	RAB5C	79	35.882	ENSFDAG00000014834	RAB23	71	35.882
ENSFDAG00000021541	RAB5C	88	40.104	ENSFDAG00000017456	RAB2B	89	40.104
ENSFDAG00000021541	RAB5C	90	42.132	ENSFDAG00000019505	-	98	42.132
ENSFDAG00000021541	RAB5C	90	40.887	ENSFDAG00000006897	RAB25	94	40.887
ENSFDAG00000021541	RAB5C	77	41.860	ENSFDAG00000008524	RAB7A	83	41.860

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSFDAG00000021541	RAB5C	100	95.370	ENSG00000108774	RAB5C	100	100.000	Homo_sapiens
ENSFDAG00000021541	RAB5C	99	87.907	ENSAPOG00000016864	rab5c	98	90.233	Acanthochromis_polyacanthus
ENSFDAG00000021541	RAB5C	100	95.370	ENSAMEG00000006003	RAB5C	100	95.370	Ailuropoda_melanoleuca
ENSFDAG00000021541	RAB5C	99	87.963	ENSACIG00000010896	rab5c	98	89.815	Amphilophus_citrinellus
ENSFDAG00000021541	RAB5C	99	87.963	ENSAOCG00000016614	rab5c	98	90.278	Amphiprion_ocellaris
ENSFDAG00000021541	RAB5C	97	87.678	ENSAPEG00000017868	-	97	90.047	Amphiprion_percula
ENSFDAG00000021541	RAB5C	100	88.532	ENSATEG00000001937	rab5c	100	89.450	Anabas_testudineus
ENSFDAG00000021541	RAB5C	94	96.569	ENSANAG00000025390	RAB5C	100	96.569	Aotus_nancymaae
ENSFDAG00000021541	RAB5C	99	87.037	ENSACLG00000002706	rab5c	98	89.352	Astatotilapia_calliptera
ENSFDAG00000021541	RAB5C	96	87.204	ENSACLG00000008615	-	99	86.758	Astatotilapia_calliptera
ENSFDAG00000021541	RAB5C	99	88.940	ENSAMXG00000043717	rab5c	98	90.783	Astyanax_mexicanus
ENSFDAG00000021541	RAB5C	96	88.571	ENSAMXG00000037267	-	99	90.476	Astyanax_mexicanus
ENSFDAG00000021541	RAB5C	100	96.296	ENSBTAG00000006982	RAB5C	100	96.296	Bos_taurus
ENSFDAG00000021541	RAB5C	99	75.463	WBGene00004268	rab-5	99	75.463	Caenorhabditis_elegans
ENSFDAG00000021541	RAB5C	100	95.833	ENSCAFG00000015629	RAB5C	100	95.833	Canis_familiaris
ENSFDAG00000021541	RAB5C	100	95.833	ENSCAFG00020013537	RAB5C	100	95.833	Canis_lupus_dingo
ENSFDAG00000021541	RAB5C	100	96.296	ENSCHIG00000012960	RAB5C	100	96.296	Capra_hircus
ENSFDAG00000021541	RAB5C	100	95.833	ENSTSYG00000030531	RAB5C	100	95.833	Carlito_syrichta
ENSFDAG00000021541	RAB5C	100	95.833	ENSCCAG00000025940	RAB5C	100	95.833	Cebus_capucinus
ENSFDAG00000021541	RAB5C	100	95.370	ENSCATG00000040873	RAB5C	100	95.370	Cercocebus_atys
ENSFDAG00000021541	RAB5C	100	97.222	ENSCLAG00000016650	RAB5C	100	97.222	Chinchilla_lanigera
ENSFDAG00000021541	RAB5C	82	97.191	ENSCHOG00000009886	RAB5C	100	97.191	Choloepus_hoffmanni
ENSFDAG00000021541	RAB5C	99	76.168	ENSCING00000003340	-	99	76.168	Ciona_intestinalis
ENSFDAG00000021541	RAB5C	99	74.667	ENSCSAVG00000000613	-	99	83.333	Ciona_savignyi
ENSFDAG00000021541	RAB5C	100	95.370	ENSCGRG00001014226	Rab5c	100	95.370	Cricetulus_griseus_chok1gshd
ENSFDAG00000021541	RAB5C	100	95.370	ENSCGRG00000007534	Rab5c	100	95.370	Cricetulus_griseus_crigri
ENSFDAG00000021541	RAB5C	99	89.352	ENSCSEG00000017024	rab5c	98	89.352	Cynoglossus_semilaevis
ENSFDAG00000021541	RAB5C	99	87.963	ENSCVAG00000009550	rab5c	98	89.815	Cyprinodon_variegatus
ENSFDAG00000021541	RAB5C	100	94.907	ENSDNOG00000038853	RAB5C	100	94.907	Dasypus_novemcinctus
ENSFDAG00000021541	RAB5C	100	94.907	ENSDORG00000006819	Rab5c	100	94.907	Dipodomys_ordii
ENSFDAG00000021541	RAB5C	99	73.239	FBgn0014010	Rab5	95	73.239	Drosophila_melanogaster
ENSFDAG00000021541	RAB5C	99	78.605	ENSEBUG00000014794	rab5c	100	78.605	Eptatretus_burgeri
ENSFDAG00000021541	RAB5C	100	95.370	ENSEASG00005009281	RAB5C	100	95.370	Equus_asinus_asinus
ENSFDAG00000021541	RAB5C	100	95.833	ENSECAG00000025054	RAB5C	100	95.833	Equus_caballus
ENSFDAG00000021541	RAB5C	100	96.296	ENSEEUG00000002790	RAB5C	100	96.296	Erinaceus_europaeus
ENSFDAG00000021541	RAB5C	99	87.500	ENSELUG00000010439	-	98	87.500	Esox_lucius
ENSFDAG00000021541	RAB5C	99	87.500	ENSELUG00000018516	rab5c	99	89.352	Esox_lucius
ENSFDAG00000021541	RAB5C	100	96.296	ENSFCAG00000002148	RAB5C	100	96.296	Felis_catus
ENSFDAG00000021541	RAB5C	99	89.401	ENSFHEG00000015268	-	99	89.401	Fundulus_heteroclitus
ENSFDAG00000021541	RAB5C	99	87.963	ENSFHEG00000012117	rab5c	98	89.815	Fundulus_heteroclitus
ENSFDAG00000021541	RAB5C	80	86.047	ENSGMOG00000001876	-	99	86.047	Gadus_morhua
ENSFDAG00000021541	RAB5C	99	86.574	ENSGMOG00000015096	rab5c	98	88.889	Gadus_morhua
ENSFDAG00000021541	RAB5C	99	88.889	ENSGAFG00000000884	rab5c	98	90.741	Gambusia_affinis
ENSFDAG00000021541	RAB5C	96	89.524	ENSGAFG00000003642	-	99	87.273	Gambusia_affinis
ENSFDAG00000021541	RAB5C	87	93.617	ENSGACG00000008659	rab5c	98	86.574	Gasterosteus_aculeatus
ENSFDAG00000021541	RAB5C	100	95.370	ENSGGOG00000005472	RAB5C	100	95.370	Gorilla_gorilla
ENSFDAG00000021541	RAB5C	96	87.204	ENSHBUG00000006823	-	99	86.758	Haplochromis_burtoni
ENSFDAG00000021541	RAB5C	99	87.037	ENSHBUG00000002014	rab5c	98	89.352	Haplochromis_burtoni
ENSFDAG00000021541	RAB5C	100	95.370	ENSHGLG00000012067	RAB5C	100	95.370	Heterocephalus_glaber_female
ENSFDAG00000021541	RAB5C	99	88.479	ENSHCOG00000004662	rab5c	97	89.862	Hippocampus_comes
ENSFDAG00000021541	RAB5C	97	80.660	ENSHCOG00000020238	-	100	79.091	Hippocampus_comes
ENSFDAG00000021541	RAB5C	96	86.667	ENSIPUG00000020082	rab5c	98	87.615	Ictalurus_punctatus
ENSFDAG00000021541	RAB5C	100	94.907	ENSSTOG00000006620	RAB5C	100	94.907	Ictidomys_tridecemlineatus
ENSFDAG00000021541	RAB5C	100	95.370	ENSJJAG00000021181	Rab5c	100	95.370	Jaculus_jaculus
ENSFDAG00000021541	RAB5C	99	87.558	ENSKMAG00000017417	-	99	87.558	Kryptolebias_marmoratus
ENSFDAG00000021541	RAB5C	99	87.500	ENSKMAG00000020038	rab5c	98	89.352	Kryptolebias_marmoratus
ENSFDAG00000021541	RAB5C	99	88.889	ENSLBEG00000004128	rab5c	98	90.741	Labrus_bergylta
ENSFDAG00000021541	RAB5C	100	86.697	ENSLBEG00000010408	-	99	86.697	Labrus_bergylta
ENSFDAG00000021541	RAB5C	99	92.056	ENSLOCG00000012566	rab5c	100	92.056	Lepisosteus_oculatus
ENSFDAG00000021541	RAB5C	100	95.370	ENSMFAG00000039627	RAB5C	100	95.370	Macaca_fascicularis
ENSFDAG00000021541	RAB5C	100	95.370	ENSMNEG00000000355	RAB5C	100	95.370	Macaca_nemestrina
ENSFDAG00000021541	RAB5C	99	87.500	ENSMAMG00000022322	rab5c	98	89.352	Mastacembelus_armatus
ENSFDAG00000021541	RAB5C	99	86.175	ENSMAMG00000016207	-	99	86.175	Mastacembelus_armatus
ENSFDAG00000021541	RAB5C	99	87.037	ENSMZEG00005022735	rab5c	98	89.352	Maylandia_zebra
ENSFDAG00000021541	RAB5C	96	87.204	ENSMZEG00005021090	-	99	86.758	Maylandia_zebra
ENSFDAG00000021541	RAB5C	100	96.296	ENSMAUG00000015005	Rab5c	100	96.296	Mesocricetus_auratus
ENSFDAG00000021541	RAB5C	100	95.370	ENSMICG00000041608	RAB5C	100	95.370	Microcebus_murinus
ENSFDAG00000021541	RAB5C	100	96.296	ENSMOCG00000018531	-	100	96.296	Microtus_ochrogaster
ENSFDAG00000021541	RAB5C	99	89.352	ENSMMOG00000020621	rab5c	98	89.352	Mola_mola
ENSFDAG00000021541	RAB5C	97	83.886	ENSMALG00000006052	rab5c	96	83.721	Monopterus_albus
ENSFDAG00000021541	RAB5C	99	85.780	ENSMALG00000022348	-	99	85.780	Monopterus_albus
ENSFDAG00000021541	RAB5C	100	95.833	MGP_CAROLIEiJ_G0017184	Rab5c	100	95.833	Mus_caroli
ENSFDAG00000021541	RAB5C	100	95.833	ENSMUSG00000019173	Rab5c	100	95.833	Mus_musculus
ENSFDAG00000021541	RAB5C	100	95.833	MGP_PahariEiJ_G0018314	Rab5c	100	95.833	Mus_pahari
ENSFDAG00000021541	RAB5C	100	95.833	MGP_SPRETEiJ_G0018027	Rab5c	100	95.833	Mus_spretus
ENSFDAG00000021541	RAB5C	100	95.370	ENSMPUG00000010554	RAB5C	100	95.370	Mustela_putorius_furo
ENSFDAG00000021541	RAB5C	100	95.370	ENSNGAG00000010286	Rab5c	100	95.370	Nannospalax_galili
ENSFDAG00000021541	RAB5C	96	87.204	ENSNBRG00000016922	-	99	86.758	Neolamprologus_brichardi
ENSFDAG00000021541	RAB5C	99	87.963	ENSNBRG00000018165	rab5c	98	90.278	Neolamprologus_brichardi
ENSFDAG00000021541	RAB5C	82	91.573	ENSOPRG00000008255	RAB5C	100	91.573	Ochotona_princeps
ENSFDAG00000021541	RAB5C	100	96.296	ENSODEG00000017920	RAB5C	100	96.296	Octodon_degus
ENSFDAG00000021541	RAB5C	99	87.963	ENSONIG00000001113	rab5c	98	90.278	Oreochromis_niloticus
ENSFDAG00000021541	RAB5C	100	87.156	ENSORLG00000003882	rab5c	100	88.073	Oryzias_latipes
ENSFDAG00000021541	RAB5C	100	88.073	ENSORLG00020008388	rab5c	100	88.073	Oryzias_latipes_hni
ENSFDAG00000021541	RAB5C	100	87.156	ENSORLG00015021900	rab5c	100	88.073	Oryzias_latipes_hsok
ENSFDAG00000021541	RAB5C	100	87.156	ENSOMEG00000023078	rab5c	100	88.073	Oryzias_melastigma
ENSFDAG00000021541	RAB5C	100	95.370	ENSOGAG00000009456	RAB5C	100	95.370	Otolemur_garnettii
ENSFDAG00000021541	RAB5C	100	96.296	ENSOARG00000018768	RAB5C	100	96.296	Ovis_aries
ENSFDAG00000021541	RAB5C	100	95.370	ENSPPAG00000037206	RAB5C	100	95.370	Pan_paniscus
ENSFDAG00000021541	RAB5C	100	96.296	ENSPPRG00000005745	RAB5C	100	96.296	Panthera_pardus
ENSFDAG00000021541	RAB5C	100	96.296	ENSPTIG00000008177	RAB5C	100	96.296	Panthera_tigris_altaica
ENSFDAG00000021541	RAB5C	100	95.370	ENSPTRG00000009194	RAB5C	100	95.370	Pan_troglodytes
ENSFDAG00000021541	RAB5C	99	86.574	ENSPKIG00000020112	-	99	86.574	Paramormyrops_kingsleyae
ENSFDAG00000021541	RAB5C	99	86.916	ENSPKIG00000001237	-	99	86.916	Paramormyrops_kingsleyae
ENSFDAG00000021541	RAB5C	99	85.648	ENSPMGG00000010792	rab5c	97	89.100	Periophthalmus_magnuspinnatus
ENSFDAG00000021541	RAB5C	100	96.296	ENSPEMG00000017971	Rab5c	100	96.296	Peromyscus_maniculatus_bairdii
ENSFDAG00000021541	RAB5C	99	78.140	ENSPMAG00000007867	rab5c	100	78.140	Petromyzon_marinus
ENSFDAG00000021541	RAB5C	99	77.232	ENSPMAG00000000008	rab5c	100	77.232	Petromyzon_marinus
ENSFDAG00000021541	RAB5C	99	78.140	ENSPMAG00000001399	rab5c	100	78.140	Petromyzon_marinus
ENSFDAG00000021541	RAB5C	100	94.444	ENSPCIG00000020225	-	100	94.444	Phascolarctos_cinereus
ENSFDAG00000021541	RAB5C	99	88.940	ENSPLAG00000016333	-	99	88.940	Poecilia_latipinna
ENSFDAG00000021541	RAB5C	99	88.889	ENSPLAG00000004790	rab5c	98	90.741	Poecilia_latipinna
ENSFDAG00000021541	RAB5C	97	87.736	ENSPMEG00000012614	-	98	88.128	Poecilia_mexicana
ENSFDAG00000021541	RAB5C	99	88.889	ENSPMEG00000011336	rab5c	98	90.741	Poecilia_mexicana
ENSFDAG00000021541	RAB5C	87	91.534	ENSPREG00000022167	-	89	92.896	Poecilia_reticulata
ENSFDAG00000021541	RAB5C	99	88.889	ENSPREG00000010146	rab5c	98	90.741	Poecilia_reticulata
ENSFDAG00000021541	RAB5C	100	95.370	ENSPPYG00000008398	RAB5C	100	95.370	Pongo_abelii
ENSFDAG00000021541	RAB5C	100	95.370	ENSPCAG00000016412	RAB5C	100	95.370	Procavia_capensis
ENSFDAG00000021541	RAB5C	100	94.907	ENSPCOG00000026327	RAB5C	100	94.907	Propithecus_coquereli
ENSFDAG00000021541	RAB5C	100	95.833	ENSPVAG00000003867	RAB5C	100	95.833	Pteropus_vampyrus
ENSFDAG00000021541	RAB5C	99	87.037	ENSPNYG00000010615	rab5c	98	89.352	Pundamilia_nyererei
ENSFDAG00000021541	RAB5C	96	87.204	ENSPNYG00000015851	-	99	86.758	Pundamilia_nyererei
ENSFDAG00000021541	RAB5C	97	86.792	ENSPNAG00000002218	-	99	88.679	Pygocentrus_nattereri
ENSFDAG00000021541	RAB5C	99	90.323	ENSPNAG00000028138	rab5c	98	90.323	Pygocentrus_nattereri
ENSFDAG00000021541	RAB5C	100	96.296	ENSRNOG00000018568	Rab5c	100	96.296	Rattus_norvegicus
ENSFDAG00000021541	RAB5C	100	95.370	ENSRBIG00000031376	RAB5C	100	95.370	Rhinopithecus_bieti
ENSFDAG00000021541	RAB5C	100	95.370	ENSRROG00000032895	RAB5C	100	95.370	Rhinopithecus_roxellana
ENSFDAG00000021541	RAB5C	100	95.833	ENSSBOG00000032552	-	100	95.833	Saimiri_boliviensis_boliviensis
ENSFDAG00000021541	RAB5C	100	94.907	ENSSHAG00000005267	-	100	94.907	Sarcophilus_harrisii
ENSFDAG00000021541	RAB5C	99	86.175	ENSSFOG00015009988	-	99	86.175	Scleropages_formosus
ENSFDAG00000021541	RAB5C	96	91.346	ENSSMAG00000007323	rab5c	98	89.815	Scophthalmus_maximus
ENSFDAG00000021541	RAB5C	99	90.741	ENSSDUG00000023008	rab5c	98	90.741	Seriola_dumerili
ENSFDAG00000021541	RAB5C	99	90.278	ENSSLDG00000017771	rab5c	98	90.278	Seriola_lalandi_dorsalis
ENSFDAG00000021541	RAB5C	100	94.444	ENSSPUG00000012950	-	100	94.444	Sphenodon_punctatus
ENSFDAG00000021541	RAB5C	99	88.889	ENSSPAG00000006436	rab5c	98	91.204	Stegastes_partitus
ENSFDAG00000021541	RAB5C	100	96.296	ENSSSCG00000032467	RAB5C	100	96.296	Sus_scrofa
ENSFDAG00000021541	RAB5C	99	87.037	ENSTRUG00000015590	rab5c	98	88.889	Takifugu_rubripes
ENSFDAG00000021541	RAB5C	96	89.474	ENSTNIG00000011711	rab5c	95	89.474	Tetraodon_nigroviridis
ENSFDAG00000021541	RAB5C	100	95.370	ENSTBEG00000007092	RAB5C	100	95.370	Tupaia_belangeri
ENSFDAG00000021541	RAB5C	100	95.370	ENSTTRG00000006673	RAB5C	100	95.370	Tursiops_truncatus
ENSFDAG00000021541	RAB5C	100	95.370	ENSUAMG00000024343	RAB5C	100	95.370	Ursus_americanus
ENSFDAG00000021541	RAB5C	100	95.370	ENSUMAG00000023270	RAB5C	100	95.370	Ursus_maritimus
ENSFDAG00000021541	RAB5C	96	90.000	ENSXCOG00000006300	-	99	87.727	Xiphophorus_couchianus
ENSFDAG00000021541	RAB5C	99	88.426	ENSXCOG00000016788	rab5c	98	90.741	Xiphophorus_couchianus
ENSFDAG00000021541	RAB5C	99	88.889	ENSXMAG00000003266	rab5c	98	90.741	Xiphophorus_maculatus
ENSFDAG00000021541	RAB5C	99	88.940	ENSXMAG00000022179	-	99	88.940	Xiphophorus_maculatus