EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSFHEG00000000123 (Gene tree)
Gene ID: 105936842
Gene Symbol: -
Alias: -
Full Name: calreticulin
Gene Type: protein_coding
Species: Fundulus_heteroclitus
Status: putative
Strand: Plus strand
Length: 6858 bases
Position: chrKN811493.1:2392237-2399094
Accession: 105936842
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSFHEP00000003804	Calreticulin	PF00262.18	7.1e-78	1	2
ENSFHEP00000003804	Calreticulin	PF00262.18	7.1e-78	2	2

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSFHET00000009931	-	1269	XM_012877844	ENSFHEP00000003804	422 (aa)	XP_012733298	-

Gene Model

Click here to download ENSFHEG00000000123's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSFHEG00000000123's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSFHEG00000000123	-	73	39.394	ENSFHEG00000006895	canx	71	40.870
ENSFHEG00000000123	-	84	71.667	ENSFHEG00000009974	calr3b	86	71.866
ENSFHEG00000000123	-	68	40.058	ENSFHEG00000013409	clgn	62	40.058

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSFHEG00000000123	-	89	78.811	ENSAMXG00000018577	-	100	77.136	Astyanax_mexicanus
ENSFHEG00000000123	-	90	69.409	ENSCAFG00000017093	CALR	96	67.822	Canis_familiaris
ENSFHEG00000000123	-	71	83.893	ENSCPBG00000023916	-	85	82.857	Chrysemys_picta_bellii
ENSFHEG00000000123	-	85	69.529	ENSDARG00000103979	calr3a	90	69.921	Danio_rerio
ENSFHEG00000000123	-	88	61.518	FBgn0005585	Calr	88	61.518	Drosophila_melanogaster
ENSFHEG00000000123	-	69	34.483	FBgn0264077	Cnx14D	54	34.884	Drosophila_melanogaster
ENSFHEG00000000123	-	85	64.865	ENSEBUG00000008568	calr3a	88	63.307	Eptatretus_burgeri
ENSFHEG00000000123	-	85	78.056	ENSELUG00000008294	-	86	78.056	Esox_lucius
ENSFHEG00000000123	-	85	84.722	ENSMAMG00000003716	-	88	84.319	Mastacembelus_armatus
ENSFHEG00000000123	-	90	82.398	ENSMMOG00000020031	-	87	83.333	Mola_mola
ENSFHEG00000000123	-	82	70.868	ENSMLUG00000012776	-	91	68.557	Myotis_lucifugus
ENSFHEG00000000123	-	85	71.892	ENSORLG00000017171	-	89	73.753	Oryzias_latipes
ENSFHEG00000000123	-	85	84.722	ENSOMEG00000010424	-	89	84.238	Oryzias_melastigma
ENSFHEG00000000123	-	68	39.535	ENSPSIG00000009344	-	53	39.766	Pelodiscus_sinensis
ENSFHEG00000000123	-	69	41.159	ENSPSIG00000003895	-	60	40.936	Pelodiscus_sinensis
ENSFHEG00000000123	-	71	82.060	ENSPSIG00000012928	-	81	81.132	Pelodiscus_sinensis
ENSFHEG00000000123	-	85	79.189	ENSPNAG00000016813	-	100	77.546	Pygocentrus_nattereri
ENSFHEG00000000123	-	90	66.580	ENSSMAG00000005047	calr3a	86	70.690	Scophthalmus_maximus
ENSFHEG00000000123	-	82	37.656	ENSSLDG00000020527	-	70	37.656	Seriola_lalandi_dorsalis
ENSFHEG00000000123	-	89	80.829	ENSTRUG00000004597	-	88	80.206	Takifugu_rubripes
ENSFHEG00000000123	-	86	69.003	ENSXETG00000007937	calr	91	68.814	Xenopus_tropicalis