EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSFHEG00000000262 (Gene tree)
Gene ID: 105916052
Gene Symbol: polr1c
Alias: zgc:65973
Full Name: RNA polymerase I and III subunit C
Gene Type: protein_coding
Species: Fundulus_heteroclitus
Status: putative
Strand: Minus strand
Length: 12261 bases
Position: chrKN805686.1:388932-401192
Accession: 105916052
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSFHEP00000027731	RNA_pol_A_bac	PF01000.26	5.3e-28	1	1
ENSFHEP00000027731	RNA_pol_L	PF01193.24	1.8e-23	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSFHET00000016715	-	891	XM_012850354	ENSFHEP00000027731	296 (aa)	XP_012705808	-

Gene Model

Click here to download ENSFHEG00000000262's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSFHEG00000000262's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSFHEG00000000262	polr1c	56	95.349	ENSFHEG00000013867	-	84	95.349

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSFHEG00000000262	polr1c	100	72.054	ENSG00000171453	POLR1C	100	72.581	Homo_sapiens
ENSFHEG00000000262	polr1c	100	73.789	ENSAPOG00000024356	polr1c	100	73.219	Acanthochromis_polyacanthus
ENSFHEG00000000262	polr1c	99	61.739	ENSAMEG00000012205	POLR1C	99	61.449	Ailuropoda_melanoleuca
ENSFHEG00000000262	polr1c	93	63.142	ENSACIG00000016268	polr1c	91	63.142	Amphilophus_citrinellus
ENSFHEG00000000262	polr1c	100	72.934	ENSAOCG00000011687	polr1c	97	72.365	Amphiprion_ocellaris
ENSFHEG00000000262	polr1c	100	73.789	ENSAPEG00000002433	polr1c	100	73.219	Amphiprion_percula
ENSFHEG00000000262	polr1c	99	80.967	ENSATEG00000005985	polr1c	99	80.967	Anabas_testudineus
ENSFHEG00000000262	polr1c	84	60.333	ENSAPLG00000002908	POLR1C	100	60.000	Anas_platyrhynchos
ENSFHEG00000000262	polr1c	88	62.258	ENSACAG00000009764	POLR1C	89	61.935	Anolis_carolinensis
ENSFHEG00000000262	polr1c	100	72.391	ENSANAG00000025805	POLR1C	100	72.391	Aotus_nancymaae
ENSFHEG00000000262	polr1c	100	89.226	ENSACLG00000006573	polr1c	100	89.226	Astatotilapia_calliptera
ENSFHEG00000000262	polr1c	100	81.818	ENSAMXG00000012062	polr1c	100	81.818	Astyanax_mexicanus
ENSFHEG00000000262	polr1c	100	62.248	ENSBTAG00000018969	POLR1C	100	61.960	Bos_taurus
ENSFHEG00000000262	polr1c	81	30.403	WBGene00007971	rpb-3	92	30.403	Caenorhabditis_elegans
ENSFHEG00000000262	polr1c	91	36.686	WBGene00019275	rpac-40	92	36.391	Caenorhabditis_elegans
ENSFHEG00000000262	polr1c	100	71.717	ENSCJAG00000005594	POLR1C	100	71.717	Callithrix_jacchus
ENSFHEG00000000262	polr1c	100	61.671	ENSCAFG00000001872	POLR1C	100	61.383	Canis_familiaris
ENSFHEG00000000262	polr1c	100	61.671	ENSCAFG00020012018	POLR1C	100	61.383	Canis_lupus_dingo
ENSFHEG00000000262	polr1c	58	31.461	ENSCAFG00020007660	POLR2C	50	31.461	Canis_lupus_dingo
ENSFHEG00000000262	polr1c	100	61.782	ENSCHIG00000004352	POLR1C	100	61.494	Capra_hircus
ENSFHEG00000000262	polr1c	100	72.391	ENSTSYG00000011921	POLR1C	100	72.391	Carlito_syrichta
ENSFHEG00000000262	polr1c	84	61.873	ENSCAPG00000015364	POLR1C	88	61.538	Cavia_aperea
ENSFHEG00000000262	polr1c	100	63.112	ENSCPOG00000038098	POLR1C	100	62.824	Cavia_porcellus
ENSFHEG00000000262	polr1c	100	72.054	ENSCCAG00000020169	POLR1C	100	72.054	Cebus_capucinus
ENSFHEG00000000262	polr1c	100	71.717	ENSCATG00000044045	POLR1C	100	71.717	Cercocebus_atys
ENSFHEG00000000262	polr1c	100	63.112	ENSCLAG00000009266	POLR1C	100	62.824	Chinchilla_lanigera
ENSFHEG00000000262	polr1c	100	61.095	ENSCSAG00000011913	POLR1C	100	60.807	Chlorocebus_sabaeus
ENSFHEG00000000262	polr1c	55	50.943	ENSCHOG00000006601	POLR1C	100	50.472	Choloepus_hoffmanni
ENSFHEG00000000262	polr1c	99	64.928	ENSCPBG00000025203	POLR1C	99	64.638	Chrysemys_picta_bellii
ENSFHEG00000000262	polr1c	60	30.526	ENSCING00000021895	-	61	30.526	Ciona_intestinalis
ENSFHEG00000000262	polr1c	97	45.858	ENSCING00000003563	-	97	46.154	Ciona_intestinalis
ENSFHEG00000000262	polr1c	100	72.054	ENSCANG00000043167	POLR1C	100	72.054	Colobus_angolensis_palliatus
ENSFHEG00000000262	polr1c	100	61.095	ENSCGRG00001017533	Polr1c	100	61.095	Cricetulus_griseus_chok1gshd
ENSFHEG00000000262	polr1c	84	59.532	ENSCGRG00000013225	Polr1c	100	59.532	Cricetulus_griseus_crigri
ENSFHEG00000000262	polr1c	100	72.832	ENSCSEG00000018097	polr1c	100	72.543	Cynoglossus_semilaevis
ENSFHEG00000000262	polr1c	55	71.226	ENSCVAG00000005684	polr1c	90	69.643	Cyprinodon_variegatus
ENSFHEG00000000262	polr1c	100	69.452	ENSDARG00000039400	polr1c	88	79.310	Danio_rerio
ENSFHEG00000000262	polr1c	100	61.383	ENSDNOG00000042693	POLR1C	100	61.095	Dasypus_novemcinctus
ENSFHEG00000000262	polr1c	100	62.248	ENSDORG00000000429	Polr1c	100	61.960	Dipodomys_ordii
ENSFHEG00000000262	polr1c	89	43.408	FBgn0031657	CG3756	93	43.408	Drosophila_melanogaster
ENSFHEG00000000262	polr1c	99	58.382	ENSETEG00000010807	POLR1C	99	58.092	Echinops_telfairi
ENSFHEG00000000262	polr1c	96	57.143	ENSEBUG00000013725	polr1c	97	57.143	Eptatretus_burgeri
ENSFHEG00000000262	polr1c	100	61.960	ENSEASG00005003338	POLR1C	100	61.671	Equus_asinus_asinus
ENSFHEG00000000262	polr1c	100	72.391	ENSECAG00000023516	POLR1C	100	72.391	Equus_caballus
ENSFHEG00000000262	polr1c	99	62.609	ENSEEUG00000005471	POLR1C	99	62.319	Erinaceus_europaeus
ENSFHEG00000000262	polr1c	100	81.818	ENSELUG00000013027	polr1c	100	81.818	Esox_lucius
ENSFHEG00000000262	polr1c	100	72.391	ENSFCAG00000009735	POLR1C	100	72.391	Felis_catus
ENSFHEG00000000262	polr1c	92	61.300	ENSFALG00000012111	POLR1C	100	60.991	Ficedula_albicollis
ENSFHEG00000000262	polr1c	100	63.112	ENSFDAG00000008428	POLR1C	100	62.824	Fukomys_damarensis
ENSFHEG00000000262	polr1c	92	69.040	ENSGMOG00000013878	polr1c	100	68.731	Gadus_morhua
ENSFHEG00000000262	polr1c	100	62.824	ENSGALG00000010349	POLR1C	100	62.536	Gallus_gallus
ENSFHEG00000000262	polr1c	100	80.627	ENSGAFG00000010153	polr1c	100	80.057	Gambusia_affinis
ENSFHEG00000000262	polr1c	93	83.732	ENSGACG00000002453	polr1c	100	71.510	Gasterosteus_aculeatus
ENSFHEG00000000262	polr1c	98	64.327	ENSGAGG00000010640	POLR1C	99	64.035	Gopherus_agassizii
ENSFHEG00000000262	polr1c	100	72.054	ENSGGOG00000010903	POLR1C	100	72.054	Gorilla_gorilla
ENSFHEG00000000262	polr1c	100	67.435	ENSHBUG00000017816	polr1c	100	66.859	Haplochromis_burtoni
ENSFHEG00000000262	polr1c	100	62.248	ENSHGLG00000019441	POLR1C	100	61.960	Heterocephalus_glaber_female
ENSFHEG00000000262	polr1c	100	62.536	ENSHGLG00100005970	POLR1C	100	62.248	Heterocephalus_glaber_male
ENSFHEG00000000262	polr1c	99	67.908	ENSHCOG00000002179	polr1c	99	67.335	Hippocampus_comes
ENSFHEG00000000262	polr1c	99	70.145	ENSIPUG00000024464	polr1c	99	69.855	Ictalurus_punctatus
ENSFHEG00000000262	polr1c	100	62.248	ENSSTOG00000010631	POLR1C	100	61.960	Ictidomys_tridecemlineatus
ENSFHEG00000000262	polr1c	100	62.248	ENSJJAG00000023110	Polr1c	100	61.960	Jaculus_jaculus
ENSFHEG00000000262	polr1c	100	92.568	ENSKMAG00000014305	polr1c	100	92.568	Kryptolebias_marmoratus
ENSFHEG00000000262	polr1c	100	73.789	ENSLBEG00000014925	polr1c	100	73.219	Labrus_bergylta
ENSFHEG00000000262	polr1c	94	56.481	ENSLACG00000012567	POLR1C	98	56.481	Latimeria_chalumnae
ENSFHEG00000000262	polr1c	100	67.723	ENSLOCG00000016710	polr1c	96	67.435	Lepisosteus_oculatus
ENSFHEG00000000262	polr1c	84	61.130	ENSLAFG00000026248	POLR1C	100	60.797	Loxodonta_africana
ENSFHEG00000000262	polr1c	58	30.899	ENSLAFG00000027230	POLR2C	62	30.899	Loxodonta_africana
ENSFHEG00000000262	polr1c	100	71.717	ENSMFAG00000046295	POLR1C	100	71.717	Macaca_fascicularis
ENSFHEG00000000262	polr1c	100	71.717	ENSMMUG00000015192	POLR1C	100	71.717	Macaca_mulatta
ENSFHEG00000000262	polr1c	100	71.717	ENSMNEG00000028073	POLR1C	100	71.717	Macaca_nemestrina
ENSFHEG00000000262	polr1c	100	71.380	ENSMLEG00000034818	POLR1C	100	71.380	Mandrillus_leucophaeus
ENSFHEG00000000262	polr1c	100	87.879	ENSMAMG00000008700	polr1c	100	87.879	Mastacembelus_armatus
ENSFHEG00000000262	polr1c	100	88.889	ENSMZEG00005018545	polr1c	100	88.889	Maylandia_zebra
ENSFHEG00000000262	polr1c	81	56.701	ENSMGAG00000011020	POLR1C	100	56.357	Meleagris_gallopavo
ENSFHEG00000000262	polr1c	100	61.383	ENSMAUG00000014329	Polr1c	100	61.383	Mesocricetus_auratus
ENSFHEG00000000262	polr1c	100	71.717	ENSMICG00000005027	POLR1C	100	71.717	Microcebus_murinus
ENSFHEG00000000262	polr1c	100	61.671	ENSMOCG00000017549	Polr1c	100	61.671	Microtus_ochrogaster
ENSFHEG00000000262	polr1c	100	84.122	ENSMMOG00000005380	polr1c	100	84.122	Mola_mola
ENSFHEG00000000262	polr1c	81	61.168	ENSMODG00000018964	POLR1C	100	60.825	Monodelphis_domestica
ENSFHEG00000000262	polr1c	100	89.226	ENSMALG00000011711	polr1c	100	89.226	Monopterus_albus
ENSFHEG00000000262	polr1c	100	52.738	MGP_CAROLIEiJ_G0021662	Polr1c	100	59.420	Mus_caroli
ENSFHEG00000000262	polr1c	100	61.383	ENSMUSG00000067148	Polr1c	99	76.699	Mus_musculus
ENSFHEG00000000262	polr1c	100	62.248	MGP_PahariEiJ_G0020654	Polr1c	99	77.670	Mus_pahari
ENSFHEG00000000262	polr1c	100	61.383	MGP_SPRETEiJ_G0022574	Polr1c	99	76.699	Mus_spretus
ENSFHEG00000000262	polr1c	100	61.671	ENSMPUG00000012916	POLR1C	91	61.383	Mustela_putorius_furo
ENSFHEG00000000262	polr1c	100	61.960	ENSMLUG00000017751	POLR1C	99	61.671	Myotis_lucifugus
ENSFHEG00000000262	polr1c	100	62.536	ENSNGAG00000023487	Polr1c	100	62.248	Nannospalax_galili
ENSFHEG00000000262	polr1c	100	89.527	ENSNBRG00000018742	polr1c	100	89.527	Neolamprologus_brichardi
ENSFHEG00000000262	polr1c	100	61.383	ENSNLEG00000004035	POLR1C	100	61.095	Nomascus_leucogenys
ENSFHEG00000000262	polr1c	99	62.609	ENSMEUG00000006778	POLR1C	99	62.609	Notamacropus_eugenii
ENSFHEG00000000262	polr1c	80	69.456	ENSOPRG00000000145	POLR1C	88	69.456	Ochotona_princeps
ENSFHEG00000000262	polr1c	57	52.294	ENSODEG00000017109	-	99	51.835	Octodon_degus
ENSFHEG00000000262	polr1c	100	62.824	ENSODEG00000015831	-	100	62.536	Octodon_degus
ENSFHEG00000000262	polr1c	100	76.353	ENSONIG00000013133	polr1c	98	75.783	Oreochromis_niloticus
ENSFHEG00000000262	polr1c	99	60.580	ENSOANG00000003043	POLR1C	99	58.790	Ornithorhynchus_anatinus
ENSFHEG00000000262	polr1c	100	61.671	ENSOCUG00000005504	POLR1C	99	61.383	Oryctolagus_cuniculus
ENSFHEG00000000262	polr1c	100	71.795	ENSORLG00000019743	polr1c	100	71.225	Oryzias_latipes
ENSFHEG00000000262	polr1c	72	51.825	ENSORLG00020005555	polr1c	81	52.692	Oryzias_latipes_hni
ENSFHEG00000000262	polr1c	100	72.650	ENSORLG00020006489	POLR1C	100	72.080	Oryzias_latipes_hni
ENSFHEG00000000262	polr1c	100	72.080	ENSORLG00015013322	polr1c	100	71.510	Oryzias_latipes_hsok
ENSFHEG00000000262	polr1c	98	73.121	ENSOMEG00000016527	polr1c	89	85.549	Oryzias_melastigma
ENSFHEG00000000262	polr1c	99	61.383	ENSOGAG00000016318	POLR1C	99	61.095	Otolemur_garnettii
ENSFHEG00000000262	polr1c	100	61.960	ENSOARG00000007503	POLR1C	100	61.671	Ovis_aries
ENSFHEG00000000262	polr1c	100	72.054	ENSPPAG00000043678	POLR1C	100	72.054	Pan_paniscus
ENSFHEG00000000262	polr1c	100	72.727	ENSPPRG00000009760	POLR1C	100	72.727	Panthera_pardus
ENSFHEG00000000262	polr1c	100	72.727	ENSPTIG00000014813	POLR1C	100	72.727	Panthera_tigris_altaica
ENSFHEG00000000262	polr1c	100	72.054	ENSPTRG00000018202	POLR1C	100	72.054	Pan_troglodytes
ENSFHEG00000000262	polr1c	100	71.717	ENSPANG00000009025	POLR1C	100	71.717	Papio_anubis
ENSFHEG00000000262	polr1c	100	78.114	ENSPKIG00000009858	polr1c	100	78.114	Paramormyrops_kingsleyae
ENSFHEG00000000262	polr1c	99	64.058	ENSPSIG00000012580	POLR1C	94	63.478	Pelodiscus_sinensis
ENSFHEG00000000262	polr1c	100	85.522	ENSPMGG00000012121	polr1c	100	85.522	Periophthalmus_magnuspinnatus
ENSFHEG00000000262	polr1c	100	61.383	ENSPEMG00000006970	Polr1c	100	61.383	Peromyscus_maniculatus_bairdii
ENSFHEG00000000262	polr1c	58	34.783	ENSPMAG00000004827	polr2c	73	34.783	Petromyzon_marinus
ENSFHEG00000000262	polr1c	99	59.827	ENSPMAG00000005560	polr1c	99	59.249	Petromyzon_marinus
ENSFHEG00000000262	polr1c	99	73.559	ENSPCIG00000028137	POLR1C	99	73.559	Phascolarctos_cinereus
ENSFHEG00000000262	polr1c	100	81.197	ENSPFOG00000014357	polr1c	98	80.627	Poecilia_formosa
ENSFHEG00000000262	polr1c	100	81.197	ENSPFOG00000014342	POLR1C	100	80.627	Poecilia_formosa
ENSFHEG00000000262	polr1c	64	86.170	ENSPLAG00000004111	polr1c	99	86.170	Poecilia_latipinna
ENSFHEG00000000262	polr1c	100	95.286	ENSPMEG00000008420	polr1c	100	95.286	Poecilia_mexicana
ENSFHEG00000000262	polr1c	100	95.286	ENSPMEG00000011877	-	100	95.286	Poecilia_mexicana
ENSFHEG00000000262	polr1c	100	82.081	ENSPREG00000007985	polr1c	100	81.503	Poecilia_reticulata
ENSFHEG00000000262	polr1c	100	61.383	ENSPPYG00000016645	POLR1C	100	61.095	Pongo_abelii
ENSFHEG00000000262	polr1c	100	71.044	ENSPCOG00000024628	POLR1C	100	71.044	Propithecus_coquereli
ENSFHEG00000000262	polr1c	100	57.061	ENSPVAG00000005689	POLR1C	100	56.772	Pteropus_vampyrus
ENSFHEG00000000262	polr1c	100	75.783	ENSPNYG00000003620	polr1c	100	75.214	Pundamilia_nyererei
ENSFHEG00000000262	polr1c	100	71.182	ENSPNAG00000008443	polr1c	100	70.893	Pygocentrus_nattereri
ENSFHEG00000000262	polr1c	100	61.383	ENSRNOG00000019079	Polr1c	100	61.095	Rattus_norvegicus
ENSFHEG00000000262	polr1c	100	71.717	ENSRBIG00000007155	POLR1C	100	71.717	Rhinopithecus_bieti
ENSFHEG00000000262	polr1c	100	72.054	ENSRROG00000000257	POLR1C	100	72.054	Rhinopithecus_roxellana
ENSFHEG00000000262	polr1c	89	39.048	YPR110C	RPC40	94	39.048	Saccharomyces_cerevisiae
ENSFHEG00000000262	polr1c	100	72.054	ENSSBOG00000025735	POLR1C	100	72.054	Saimiri_boliviensis_boliviensis
ENSFHEG00000000262	polr1c	99	55.652	ENSSHAG00000014456	POLR1C	99	55.362	Sarcophilus_harrisii
ENSFHEG00000000262	polr1c	100	70.029	ENSSFOG00015019860	polr1c	100	69.741	Scleropages_formosus
ENSFHEG00000000262	polr1c	100	75.145	ENSSMAG00000018865	polr1c	100	74.566	Scophthalmus_maximus
ENSFHEG00000000262	polr1c	100	90.203	ENSSDUG00000015745	polr1c	100	90.203	Seriola_dumerili
ENSFHEG00000000262	polr1c	100	89.865	ENSSLDG00000018285	polr1c	100	89.865	Seriola_lalandi_dorsalis
ENSFHEG00000000262	polr1c	98	61.877	ENSSPUG00000011822	POLR1C	99	61.584	Sphenodon_punctatus
ENSFHEG00000000262	polr1c	100	74.359	ENSSPAG00000022369	polr1c	100	73.789	Stegastes_partitus
ENSFHEG00000000262	polr1c	100	61.960	ENSSSCG00000028007	POLR1C	99	61.671	Sus_scrofa
ENSFHEG00000000262	polr1c	96	61.791	ENSTGUG00000009159	POLR1C	99	61.493	Taeniopygia_guttata
ENSFHEG00000000262	polr1c	100	83.557	ENSTRUG00000006264	polr1c	100	83.557	Takifugu_rubripes
ENSFHEG00000000262	polr1c	72	56.757	ENSTTRG00000006344	POLR1C	76	56.757	Tursiops_truncatus
ENSFHEG00000000262	polr1c	100	61.960	ENSUAMG00000025602	POLR1C	100	61.671	Ursus_americanus
ENSFHEG00000000262	polr1c	100	61.960	ENSUMAG00000005938	POLR1C	100	61.671	Ursus_maritimus
ENSFHEG00000000262	polr1c	100	72.054	ENSVVUG00000028922	POLR1C	100	72.054	Vulpes_vulpes
ENSFHEG00000000262	polr1c	100	57.184	ENSXETG00000010882	polr1c	100	57.184	Xenopus_tropicalis
ENSFHEG00000000262	polr1c	100	81.609	ENSXCOG00000014185	polr1c	100	81.034	Xiphophorus_couchianus
ENSFHEG00000000262	polr1c	100	81.197	ENSXMAG00000015076	polr1c	100	80.627	Xiphophorus_maculatus