EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSFHEG00000000341 (Gene tree)
Gene ID: 105920467
Gene Symbol: GFI1 (1 of many)
Alias: GFI-1|GFI1A|ZNF163
Full Name: zinc finger protein Gfi-1-like
Gene Type: protein_coding
Species: Fundulus_heteroclitus
Status: putative
Strand: Plus strand
Length: 5684 bases
Position: chrKN806079.1:127460-133143
Accession: 105920467
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSFHEP00000012867	zf-C2H2	PF00096.26	4e-21	1	5
ENSFHEP00000012867	zf-C2H2	PF00096.26	4e-21	2	5
ENSFHEP00000012867	zf-C2H2	PF00096.26	4e-21	3	5
ENSFHEP00000012867	zf-C2H2	PF00096.26	4e-21	4	5
ENSFHEP00000012867	zf-C2H2	PF00096.26	4e-21	5	5
ENSFHEP00000012867	zf-met	PF12874.7	1.4e-05	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSFHET00000020258	GFI1 (1 of many)-201	1863	XM_012856065	ENSFHEP00000012867	400 (aa)	XP_012711519	UPI0006449935

Gene Model

Click here to download ENSFHEG00000000341's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSFHEG00000000341's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSFHEG00000000341	GFI1	51	36.496	ENSFHEG00000004548	-	65	36.496
ENSFHEG00000000341	GFI1	95	37.500	ENSFHEG00000014039	znf710b	75	37.500
ENSFHEG00000000341	GFI1	100	63.171	ENSFHEG00000010997	gfi1ab	100	62.836
ENSFHEG00000000341	GFI1	51	39.881	ENSFHEG00000011944	-	82	35.849
ENSFHEG00000000341	GFI1	100	50.481	ENSFHEG00000015138	gfi1b	52	87.135
ENSFHEG00000000341	GFI1	56	44.545	ENSFHEG00000023184	-	58	44.545
ENSFHEG00000000341	GFI1	50	46.226	ENSFHEG00000010085	-	62	45.299
ENSFHEG00000000341	GFI1	51	39.881	ENSFHEG00000011490	-	66	42.568
ENSFHEG00000000341	GFI1	50	40.828	ENSFHEG00000003583	-	50	43.023

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSFHEG00000000341	GFI1	100	60.046	ENSG00000162676	GFI1	100	58.469	Homo_sapiens
ENSFHEG00000000341	GFI1	100	62.408	ENSAPOG00000015189	gfi1ab	100	62.162	Acanthochromis_polyacanthus
ENSFHEG00000000341	GFI1	100	61.125	ENSACIG00000016354	gfi1ab	100	59.413	Amphilophus_citrinellus
ENSFHEG00000000341	GFI1	100	53.465	ENSAOCG00000008339	gfi1ab	100	51.733	Amphiprion_ocellaris
ENSFHEG00000000341	GFI1	100	62.654	ENSAPEG00000023870	gfi1ab	100	59.564	Amphiprion_percula
ENSFHEG00000000341	GFI1	100	60.149	ENSATEG00000009167	gfi1ab	89	57.805	Anabas_testudineus
ENSFHEG00000000341	GFI1	85	62.931	ENSAPLG00000015700	GFI1	93	64.308	Anas_platyrhynchos
ENSFHEG00000000341	GFI1	100	61.165	ENSACAG00000004498	GFI1	100	60.680	Anolis_carolinensis
ENSFHEG00000000341	GFI1	100	57.684	ENSANAG00000019656	GFI1	100	58.486	Aotus_nancymaae
ENSFHEG00000000341	GFI1	100	62.899	ENSACLG00000026458	gfi1ab	93	59.951	Astatotilapia_calliptera
ENSFHEG00000000341	GFI1	100	58.495	ENSAMXG00000039600	gfi1ab	100	58.252	Astyanax_mexicanus
ENSFHEG00000000341	GFI1	100	61.433	ENSAMXG00000006669	GFI1	100	67.568	Astyanax_mexicanus
ENSFHEG00000000341	GFI1	100	59.447	ENSBTAG00000016723	GFI1	100	58.756	Bos_taurus
ENSFHEG00000000341	GFI1	100	59.725	ENSCJAG00000017609	GFI1	100	58.716	Callithrix_jacchus
ENSFHEG00000000341	GFI1	100	59.268	ENSCAFG00000020155	GFI1	100	59.174	Canis_familiaris
ENSFHEG00000000341	GFI1	100	59.268	ENSCAFG00020013371	GFI1	88	59.174	Canis_lupus_dingo
ENSFHEG00000000341	GFI1	100	60.138	ENSCHIG00000016135	GFI1	100	58.986	Capra_hircus
ENSFHEG00000000341	GFI1	100	58.891	ENSCPOG00000011727	GFI1	100	58.430	Cavia_porcellus
ENSFHEG00000000341	GFI1	100	60.508	ENSCCAG00000036072	GFI1	100	58.257	Cebus_capucinus
ENSFHEG00000000341	GFI1	100	58.904	ENSCATG00000037873	GFI1	100	58.257	Cercocebus_atys
ENSFHEG00000000341	GFI1	90	80.365	ENSCLAG00000005915	GFI1	100	55.679	Chinchilla_lanigera
ENSFHEG00000000341	GFI1	99	52.895	ENSCSAG00000001469	GFI1	100	52.116	Chlorocebus_sabaeus
ENSFHEG00000000341	GFI1	100	58.676	ENSCANG00000034077	GFI1	100	58.028	Colobus_angolensis_palliatus
ENSFHEG00000000341	GFI1	100	57.437	ENSCGRG00001015432	Gfi1	100	57.110	Cricetulus_griseus_chok1gshd
ENSFHEG00000000341	GFI1	100	74.074	ENSCSEG00000017729	GFI1	100	74.074	Cynoglossus_semilaevis
ENSFHEG00000000341	GFI1	100	61.386	ENSCVAG00000011828	gfi1ab	100	61.443	Cyprinodon_variegatus
ENSFHEG00000000341	GFI1	100	85.468	ENSCVAG00000004930	GFI1	100	85.468	Cyprinodon_variegatus
ENSFHEG00000000341	GFI1	100	63.793	ENSDARG00000044457	gfi1ab	100	60.671	Danio_rerio
ENSFHEG00000000341	GFI1	100	58.810	ENSDNOG00000000782	GFI1	97	59.268	Dasypus_novemcinctus
ENSFHEG00000000341	GFI1	51	72.683	ENSEBUG00000008075	gfi1ab	69	72.683	Eptatretus_burgeri
ENSFHEG00000000341	GFI1	100	60.047	ENSEASG00005015509	GFI1	86	59.397	Equus_asinus_asinus
ENSFHEG00000000341	GFI1	99	50.750	ENSECAG00000006647	GFI1	92	50.620	Equus_caballus
ENSFHEG00000000341	GFI1	100	60.142	ENSEEUG00000000198	GFI1	100	57.809	Erinaceus_europaeus
ENSFHEG00000000341	GFI1	100	62.899	ENSELUG00000003015	gfi1ab	99	59.518	Esox_lucius
ENSFHEG00000000341	GFI1	100	64.286	ENSELUG00000019033	GFI1	100	64.286	Esox_lucius
ENSFHEG00000000341	GFI1	100	59.954	ENSFCAG00000005914	GFI1	100	58.486	Felis_catus
ENSFHEG00000000341	GFI1	100	61.235	ENSGMOG00000007737	gfi1ab	100	60.149	Gadus_morhua
ENSFHEG00000000341	GFI1	100	62.621	ENSGALG00000043650	GFI1	100	60.047	Gallus_gallus
ENSFHEG00000000341	GFI1	100	88.586	ENSGAFG00000018063	GFI1	100	85.112	Gambusia_affinis
ENSFHEG00000000341	GFI1	100	63.300	ENSGAFG00000016637	gfi1ab	100	63.054	Gambusia_affinis
ENSFHEG00000000341	GFI1	100	62.189	ENSGACG00000004257	gfi1ab	97	60.539	Gasterosteus_aculeatus
ENSFHEG00000000341	GFI1	100	60.046	ENSGGOG00000005320	GFI1	100	58.469	Gorilla_gorilla
ENSFHEG00000000341	GFI1	100	61.881	ENSHBUG00000011969	gfi1ab	100	60.149	Haplochromis_burtoni
ENSFHEG00000000341	GFI1	100	60.185	ENSHGLG00000008020	GFI1	100	59.122	Heterocephalus_glaber_female
ENSFHEG00000000341	GFI1	100	60.185	ENSHGLG00100000610	GFI1	100	59.122	Heterocephalus_glaber_male
ENSFHEG00000000341	GFI1	100	68.197	ENSHCOG00000019555	GFI1	100	68.197	Hippocampus_comes
ENSFHEG00000000341	GFI1	100	54.695	ENSHCOG00000008590	gfi1ab	100	53.521	Hippocampus_comes
ENSFHEG00000000341	GFI1	100	61.707	ENSIPUG00000010071	gfi1ab	87	61.463	Ictalurus_punctatus
ENSFHEG00000000341	GFI1	100	57.908	ENSIPUG00000013414	GFI1	100	56.448	Ictalurus_punctatus
ENSFHEG00000000341	GFI1	100	58.810	ENSSTOG00000014583	GFI1	100	58.352	Ictidomys_tridecemlineatus
ENSFHEG00000000341	GFI1	100	60.976	ENSKMAG00000003810	gfi1ab	100	58.578	Kryptolebias_marmoratus
ENSFHEG00000000341	GFI1	100	60.096	ENSLBEG00000027776	gfi1ab	100	57.820	Labrus_bergylta
ENSFHEG00000000341	GFI1	100	63.107	ENSLACG00000013362	GFI1	98	59.857	Latimeria_chalumnae
ENSFHEG00000000341	GFI1	100	63.882	ENSLOCG00000004711	gfi1ab	100	61.005	Lepisosteus_oculatus
ENSFHEG00000000341	GFI1	100	59.907	ENSLAFG00000018346	GFI1	100	59.813	Loxodonta_africana
ENSFHEG00000000341	GFI1	100	58.904	ENSMFAG00000045801	GFI1	100	58.257	Macaca_fascicularis
ENSFHEG00000000341	GFI1	100	58.904	ENSMNEG00000036338	GFI1	100	58.257	Macaca_nemestrina
ENSFHEG00000000341	GFI1	100	58.904	ENSMLEG00000036181	GFI1	100	58.257	Mandrillus_leucophaeus
ENSFHEG00000000341	GFI1	100	62.283	ENSMAMG00000008125	gfi1ab	100	62.283	Mastacembelus_armatus
ENSFHEG00000000341	GFI1	100	62.899	ENSMZEG00005009895	gfi1ab	100	59.951	Maylandia_zebra
ENSFHEG00000000341	GFI1	88	62.881	ENSMGAG00000008187	GFI1	93	67.077	Meleagris_gallopavo
ENSFHEG00000000341	GFI1	100	58.352	ENSMICG00000047208	GFI1	100	58.486	Microcebus_murinus
ENSFHEG00000000341	GFI1	100	59.305	ENSMMOG00000005556	gfi1ab	100	59.057	Mola_mola
ENSFHEG00000000341	GFI1	100	60.514	ENSMODG00000011802	GFI1	100	59.346	Monodelphis_domestica
ENSFHEG00000000341	GFI1	100	60.396	ENSMALG00000014672	gfi1ab	100	58.663	Monopterus_albus
ENSFHEG00000000341	GFI1	100	59.491	MGP_CAROLIEiJ_G0027508	Gfi1	100	96.296	Mus_caroli
ENSFHEG00000000341	GFI1	100	59.770	ENSMUSG00000029275	Gfi1	100	58.430	Mus_musculus
ENSFHEG00000000341	GFI1	100	59.259	MGP_PahariEiJ_G0017280	Gfi1	100	96.296	Mus_pahari
ENSFHEG00000000341	GFI1	100	59.491	MGP_SPRETEiJ_G0028507	Gfi1	100	57.176	Mus_spretus
ENSFHEG00000000341	GFI1	100	62.624	ENSMPUG00000004178	GFI1	97	60.147	Mustela_putorius_furo
ENSFHEG00000000341	GFI1	100	58.391	ENSMLUG00000015191	GFI1	97	57.823	Myotis_lucifugus
ENSFHEG00000000341	GFI1	100	62.469	ENSNBRG00000015774	gfi1ab	100	62.222	Neolamprologus_brichardi
ENSFHEG00000000341	GFI1	91	59.747	ENSNLEG00000010470	GFI1	86	64.265	Nomascus_leucogenys
ENSFHEG00000000341	GFI1	100	59.954	ENSOPRG00000001473	GFI1	100	58.237	Ochotona_princeps
ENSFHEG00000000341	GFI1	100	62.899	ENSONIG00000019246	gfi1ab	100	59.951	Oreochromis_niloticus
ENSFHEG00000000341	GFI1	99	53.457	ENSOCUG00000023553	GFI1	93	52.618	Oryctolagus_cuniculus
ENSFHEG00000000341	GFI1	100	61.881	ENSORLG00000013806	gfi1ab	100	59.158	Oryzias_latipes
ENSFHEG00000000341	GFI1	100	72.840	ENSORLG00000005060	GFI1	100	71.642	Oryzias_latipes
ENSFHEG00000000341	GFI1	83	82.051	ENSORLG00020002817	GFI1	100	82.051	Oryzias_latipes_hni
ENSFHEG00000000341	GFI1	100	62.376	ENSORLG00020001602	gfi1ab	100	59.653	Oryzias_latipes_hni
ENSFHEG00000000341	GFI1	100	73.333	ENSORLG00015006070	GFI1	100	73.086	Oryzias_latipes_hsok
ENSFHEG00000000341	GFI1	100	73.945	ENSOMEG00000016722	GFI1	100	74.194	Oryzias_melastigma
ENSFHEG00000000341	GFI1	100	60.294	ENSOGAG00000027913	GFI1	100	59.559	Otolemur_garnettii
ENSFHEG00000000341	GFI1	100	61.787	ENSPPAG00000042186	GFI1	100	59.801	Pan_paniscus
ENSFHEG00000000341	GFI1	100	59.954	ENSPPRG00000007521	GFI1	100	58.486	Panthera_pardus
ENSFHEG00000000341	GFI1	100	59.815	ENSPTRG00000043053	GFI1	100	58.237	Pan_troglodytes
ENSFHEG00000000341	GFI1	100	58.904	ENSPANG00000016433	GFI1	100	58.257	Papio_anubis
ENSFHEG00000000341	GFI1	100	63.747	ENSPKIG00000004263	GFI1	100	59.620	Paramormyrops_kingsleyae
ENSFHEG00000000341	GFI1	85	64.368	ENSPSIG00000008734	GFI1	90	66.154	Pelodiscus_sinensis
ENSFHEG00000000341	GFI1	99	57.179	ENSPMGG00000011041	GFI1	99	56.171	Periophthalmus_magnuspinnatus
ENSFHEG00000000341	GFI1	100	60.591	ENSPMGG00000012546	gfi1ab	100	60.644	Periophthalmus_magnuspinnatus
ENSFHEG00000000341	GFI1	100	62.028	ENSPCIG00000013728	GFI1	100	60.000	Phascolarctos_cinereus
ENSFHEG00000000341	GFI1	100	62.624	ENSPFOG00000023214	gfi1ab	100	62.376	Poecilia_formosa
ENSFHEG00000000341	GFI1	100	62.624	ENSPLAG00000010879	gfi1ab	100	68.421	Poecilia_latipinna
ENSFHEG00000000341	GFI1	100	90.099	ENSPLAG00000005376	GFI1	91	85.891	Poecilia_latipinna
ENSFHEG00000000341	GFI1	100	62.624	ENSPMEG00000013694	gfi1ab	100	62.376	Poecilia_mexicana
ENSFHEG00000000341	GFI1	100	90.500	ENSPMEG00000019299	GFI1	100	86.250	Poecilia_mexicana
ENSFHEG00000000341	GFI1	100	77.990	ENSPREG00000007997	GFI1	100	73.923	Poecilia_reticulata
ENSFHEG00000000341	GFI1	100	62.531	ENSPREG00000014097	gfi1ab	100	62.283	Poecilia_reticulata
ENSFHEG00000000341	GFI1	100	49.324	ENSPCAG00000011020	GFI1	100	49.324	Procavia_capensis
ENSFHEG00000000341	GFI1	100	58.219	ENSPCOG00000020540	GFI1	100	58.352	Propithecus_coquereli
ENSFHEG00000000341	GFI1	100	59.491	ENSPVAG00000006928	GFI1	100	60.325	Pteropus_vampyrus
ENSFHEG00000000341	GFI1	100	62.899	ENSPNYG00000021183	gfi1ab	100	59.951	Pundamilia_nyererei
ENSFHEG00000000341	GFI1	100	60.147	ENSPNAG00000027258	gfi1ab	100	58.968	Pygocentrus_nattereri
ENSFHEG00000000341	GFI1	100	57.568	ENSPNAG00000028014	GFI1	100	56.250	Pygocentrus_nattereri
ENSFHEG00000000341	GFI1	100	59.404	ENSRNOG00000002042	Gfi1	100	56.849	Rattus_norvegicus
ENSFHEG00000000341	GFI1	100	59.404	ENSRBIG00000036467	GFI1	100	58.716	Rhinopithecus_bieti
ENSFHEG00000000341	GFI1	100	59.404	ENSRROG00000031687	GFI1	100	58.716	Rhinopithecus_roxellana
ENSFHEG00000000341	GFI1	100	60.046	ENSSBOG00000031300	GFI1	100	58.716	Saimiri_boliviensis_boliviensis
ENSFHEG00000000341	GFI1	100	64.165	ENSSFOG00015020295	gfi1	100	61.205	Scleropages_formosus
ENSFHEG00000000341	GFI1	100	62.624	ENSSMAG00000002782	gfi1ab	100	62.376	Scophthalmus_maximus
ENSFHEG00000000341	GFI1	100	61.538	ENSSDUG00000022410	gfi1ab	100	60.050	Seriola_dumerili
ENSFHEG00000000341	GFI1	100	61.787	ENSSLDG00000020163	gfi1ab	100	60.298	Seriola_lalandi_dorsalis
ENSFHEG00000000341	GFI1	79	73.529	ENSSPAG00000009140	gfi1ab	99	73.529	Stegastes_partitus
ENSFHEG00000000341	GFI1	100	61.163	ENSSSCG00000006902	GFI1	100	60.698	Sus_scrofa
ENSFHEG00000000341	GFI1	80	67.584	ENSTGUG00000006060	GFI1	93	67.593	Taeniopygia_guttata
ENSFHEG00000000341	GFI1	100	61.787	ENSTRUG00000000415	gfi1ab	100	61.538	Takifugu_rubripes
ENSFHEG00000000341	GFI1	100	59.259	ENSTNIG00000000651	gfi1ab	97	57.740	Tetraodon_nigroviridis
ENSFHEG00000000341	GFI1	100	60.369	ENSTTRG00000000082	GFI1	100	59.447	Tursiops_truncatus
ENSFHEG00000000341	GFI1	100	60.329	ENSUAMG00000021124	GFI1	91	59.719	Ursus_americanus
ENSFHEG00000000341	GFI1	100	61.353	ENSXETG00000023006	gfi1	98	60.628	Xenopus_tropicalis
ENSFHEG00000000341	GFI1	100	87.608	ENSXMAG00000009274	GFI1	70	83.285	Xiphophorus_maculatus
ENSFHEG00000000341	GFI1	100	62.562	ENSXMAG00000010523	gfi1ab	100	62.315	Xiphophorus_maculatus