EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSFHEG00000000347 (Gene tree)
Gene ID: 105939443
Gene Symbol: -
Alias: -
Full Name: LUC7 like 3 pre-mRNA splicing factor
Gene Type: protein_coding
Species: Fundulus_heteroclitus
Status: putative
Strand: Minus strand
Length: 8955 bases
Position: chrKN811571.1:710419-719373
Accession: 105939443
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSFHEP00000029637	LUC7	PF03194.15	1.3e-88	1	1
ENSFHEP00000029645	LUC7	PF03194.15	1.3e-88	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSFHET00000020409	-	4070	XM_021308100	ENSFHEP00000029645	479 (aa)	XP_021163775	UPI00064522B4
ENSFHET00000020439	-	2590	XM_012881599	ENSFHEP00000029637	479 (aa)	XP_012737053	UPI00064522B4

Gene Model

Click here to download ENSFHEG00000000347's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSFHEG00000000347's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSFHEG00000000347	-	57	34.307	ENSFHEG00000007623	zgc:158803	57	36.000

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSFHEG00000000347	-	52	96.386	ENSATEG00000024795	-	52	96.386	Anabas_testudineus
ENSFHEG00000000347	-	58	36.655	ENSACLG00000009285	-	60	34.602	Astatotilapia_calliptera
ENSFHEG00000000347	-	62	77.592	ENSDNOG00000035561	-	51	88.797	Dasypus_novemcinctus
ENSFHEG00000000347	-	52	96.371	ENSMALG00000004346	-	52	96.371	Monopterus_albus
ENSFHEG00000000347	-	50	88.797	ENSMLUG00000005637	-	55	88.797	Myotis_lucifugus
ENSFHEG00000000347	-	59	34.386	ENSORLG00000004110	-	61	32.993	Oryzias_latipes
ENSFHEG00000000347	-	59	34.386	ENSORLG00020009379	-	61	32.993	Oryzias_latipes_hni
ENSFHEG00000000347	-	52	95.565	ENSORLG00020015293	-	53	95.565	Oryzias_latipes_hni
ENSFHEG00000000347	-	61	36.054	ENSPKIG00000007263	-	61	34.375	Paramormyrops_kingsleyae
ENSFHEG00000000347	-	52	97.581	ENSPFOG00000011916	-	51	97.581	Poecilia_formosa
ENSFHEG00000000347	-	52	97.581	ENSPMEG00000019118	-	51	97.581	Poecilia_mexicana
ENSFHEG00000000347	-	52	97.177	ENSPREG00000020837	-	57	97.177	Poecilia_reticulata
ENSFHEG00000000347	-	52	94.758	ENSTRUG00000008332	-	52	94.758	Takifugu_rubripes