EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSFHEG00000000560 (Gene tree)
Gene ID: 105926119
Gene Symbol: prpf6
Alias: c20orf14|fc12b02|wu:fa05f07|wu:fc12b02|zgc:65913
Full Name: pre-mRNA processing factor 6
Gene Type: protein_coding
Species: Fundulus_heteroclitus
Status: putative
Strand: Plus strand
Length: 16076 bases
Position: chrKN811293.1:1870914-1886989
Accession: 105926119
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSFHEP00000034882	PRP1_N	PF06424.12	1.6e-57	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSFHET00000030498	-	4855	XM_012862329	ENSFHEP00000034882	968 (aa)	XP_012717783	UPI0006451311

Gene Model

Click here to download ENSFHEG00000000560's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSFHEG00000000560's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSFHEG00000000560	prpf6	96	92.880	ENSG00000101161	PRPF6	100	92.880	Homo_sapiens
ENSFHEG00000000560	prpf6	99	97.518	ENSAPOG00000010395	prpf6	99	97.518	Acanthochromis_polyacanthus
ENSFHEG00000000560	prpf6	96	92.251	ENSAMEG00000001916	PRPF6	99	92.251	Ailuropoda_melanoleuca
ENSFHEG00000000560	prpf6	100	97.523	ENSACIG00000019862	prpf6	100	97.523	Amphilophus_citrinellus
ENSFHEG00000000560	prpf6	99	97.622	ENSAOCG00000012988	prpf6	99	97.622	Amphiprion_ocellaris
ENSFHEG00000000560	prpf6	96	91.505	ENSAPEG00000008301	prpf6	100	91.720	Amphiprion_percula
ENSFHEG00000000560	prpf6	99	96.898	ENSATEG00000005581	prpf6	99	96.898	Anabas_testudineus
ENSFHEG00000000560	prpf6	96	93.305	ENSACAG00000006464	PRPF6	95	93.305	Anolis_carolinensis
ENSFHEG00000000560	prpf6	96	92.880	ENSANAG00000012661	PRPF6	100	93.757	Aotus_nancymaae
ENSFHEG00000000560	prpf6	100	97.420	ENSACLG00000025875	prpf6	100	97.420	Astatotilapia_calliptera
ENSFHEG00000000560	prpf6	97	94.597	ENSAMXG00000001929	prpf6	97	94.597	Astyanax_mexicanus
ENSFHEG00000000560	prpf6	96	93.199	ENSBTAG00000011656	PRPF6	100	93.199	Bos_taurus
ENSFHEG00000000560	prpf6	96	92.880	ENSCJAG00000010616	PRPF6	100	92.880	Callithrix_jacchus
ENSFHEG00000000560	prpf6	96	93.305	ENSCAFG00000013165	PRPF6	100	93.305	Canis_familiaris
ENSFHEG00000000560	prpf6	96	93.305	ENSCAFG00020002050	PRPF6	100	93.305	Canis_lupus_dingo
ENSFHEG00000000560	prpf6	96	93.199	ENSCHIG00000018187	PRPF6	100	93.199	Capra_hircus
ENSFHEG00000000560	prpf6	96	93.305	ENSTSYG00000007814	PRPF6	100	93.305	Carlito_syrichta
ENSFHEG00000000560	prpf6	94	92.475	ENSCAPG00000015077	PRPF6	100	92.039	Cavia_aperea
ENSFHEG00000000560	prpf6	96	93.730	ENSCPOG00000007518	PRPF6	100	93.730	Cavia_porcellus
ENSFHEG00000000560	prpf6	96	89.798	ENSCCAG00000024564	PRPF6	100	89.798	Cebus_capucinus
ENSFHEG00000000560	prpf6	96	92.986	ENSCATG00000037473	PRPF6	100	92.986	Cercocebus_atys
ENSFHEG00000000560	prpf6	96	89.904	ENSCLAG00000003854	PRPF6	100	89.904	Chinchilla_lanigera
ENSFHEG00000000560	prpf6	96	88.384	ENSCSAG00000016742	PRPF6	100	88.384	Chlorocebus_sabaeus
ENSFHEG00000000560	prpf6	81	78.211	ENSCHOG00000003315	-	98	78.017	Choloepus_hoffmanni
ENSFHEG00000000560	prpf6	98	92.196	ENSCPBG00000013964	PRPF6	96	93.617	Chrysemys_picta_bellii
ENSFHEG00000000560	prpf6	96	72.910	ENSCING00000008817	-	99	72.910	Ciona_intestinalis
ENSFHEG00000000560	prpf6	96	92.774	ENSCANG00000038230	PRPF6	100	92.774	Colobus_angolensis_palliatus
ENSFHEG00000000560	prpf6	96	93.730	ENSCGRG00001022666	Prpf6	100	93.730	Cricetulus_griseus_chok1gshd
ENSFHEG00000000560	prpf6	96	92.366	ENSCSEG00000018561	prpf6	100	92.366	Cynoglossus_semilaevis
ENSFHEG00000000560	prpf6	100	97.730	ENSCVAG00000010550	prpf6	100	97.730	Cyprinodon_variegatus
ENSFHEG00000000560	prpf6	99	93.018	ENSDARG00000091367	prpf6	100	94.597	Danio_rerio
ENSFHEG00000000560	prpf6	96	92.986	ENSDNOG00000040544	PRPF6	100	92.986	Dasypus_novemcinctus
ENSFHEG00000000560	prpf6	88	93.107	ENSDORG00000005406	Prpf6	100	93.107	Dipodomys_ordii
ENSFHEG00000000560	prpf6	96	71.505	FBgn0036828	CG6841	99	71.828	Drosophila_melanogaster
ENSFHEG00000000560	prpf6	83	92.251	ENSETEG00000004447	PRPF6	85	92.251	Echinops_telfairi
ENSFHEG00000000560	prpf6	96	86.984	ENSEBUG00000008835	prpf6	100	86.984	Eptatretus_burgeri
ENSFHEG00000000560	prpf6	99	91.125	ENSEASG00005023115	PRPF6	100	93.411	Equus_asinus_asinus
ENSFHEG00000000560	prpf6	96	89.160	ENSECAG00000013983	PRPF6	100	89.160	Equus_caballus
ENSFHEG00000000560	prpf6	86	95.833	ENSEEUG00000000180	PRPF6	81	95.833	Erinaceus_europaeus
ENSFHEG00000000560	prpf6	97	94.910	ENSELUG00000001945	prpf6	94	94.910	Esox_lucius
ENSFHEG00000000560	prpf6	96	93.305	ENSFCAG00000001183	PRPF6	100	93.305	Felis_catus
ENSFHEG00000000560	prpf6	96	87.234	ENSFALG00000006046	-	97	87.513	Ficedula_albicollis
ENSFHEG00000000560	prpf6	97	92.970	ENSFALG00000010326	-	98	92.970	Ficedula_albicollis
ENSFHEG00000000560	prpf6	96	92.242	ENSFDAG00000006451	PRPF6	100	93.424	Fukomys_damarensis
ENSFHEG00000000560	prpf6	97	94.380	ENSGMOG00000015622	prpf6	99	94.380	Gadus_morhua
ENSFHEG00000000560	prpf6	96	93.518	ENSGALG00000006001	PRPF6	100	93.518	Gallus_gallus
ENSFHEG00000000560	prpf6	100	93.602	ENSGAFG00000021109	prpf6	100	93.602	Gambusia_affinis
ENSFHEG00000000560	prpf6	97	96.292	ENSGACG00000002576	prpf6	100	96.292	Gasterosteus_aculeatus
ENSFHEG00000000560	prpf6	98	92.292	ENSGAGG00000008653	PRPF6	96	93.723	Gopherus_agassizii
ENSFHEG00000000560	prpf6	96	92.880	ENSGGOG00000016876	PRPF6	100	92.880	Gorilla_gorilla
ENSFHEG00000000560	prpf6	100	97.420	ENSHBUG00000004496	prpf6	100	97.420	Haplochromis_burtoni
ENSFHEG00000000560	prpf6	96	93.624	ENSHGLG00000009222	PRPF6	100	93.624	Heterocephalus_glaber_female
ENSFHEG00000000560	prpf6	94	93.566	ENSHGLG00100016600	PRPF6	100	93.566	Heterocephalus_glaber_male
ENSFHEG00000000560	prpf6	99	95.967	ENSHCOG00000011513	prpf6	99	95.967	Hippocampus_comes
ENSFHEG00000000560	prpf6	100	92.828	ENSIPUG00000004912	prpf6	99	92.909	Ictalurus_punctatus
ENSFHEG00000000560	prpf6	96	91.189	ENSSTOG00000002922	PRPF6	100	90.764	Ictidomys_tridecemlineatus
ENSFHEG00000000560	prpf6	96	93.730	ENSJJAG00000000836	Prpf6	100	93.730	Jaculus_jaculus
ENSFHEG00000000560	prpf6	99	97.308	ENSKMAG00000017800	prpf6	99	97.308	Kryptolebias_marmoratus
ENSFHEG00000000560	prpf6	99	96.381	ENSLBEG00000012582	prpf6	99	96.381	Labrus_bergylta
ENSFHEG00000000560	prpf6	96	94.574	ENSLOCG00000004827	prpf6	96	93.191	Lepisosteus_oculatus
ENSFHEG00000000560	prpf6	96	92.986	ENSLAFG00000005272	PRPF6	100	92.986	Loxodonta_africana
ENSFHEG00000000560	prpf6	96	92.774	ENSMFAG00000037542	PRPF6	100	92.774	Macaca_fascicularis
ENSFHEG00000000560	prpf6	96	86.518	ENSMMUG00000015558	PRPF6	98	94.454	Macaca_mulatta
ENSFHEG00000000560	prpf6	96	80.191	ENSMNEG00000045555	PRPF6	100	80.191	Macaca_nemestrina
ENSFHEG00000000560	prpf6	99	97.001	ENSMAMG00000010718	prpf6	99	97.001	Mastacembelus_armatus
ENSFHEG00000000560	prpf6	97	97.655	ENSMZEG00005015261	-	100	97.655	Maylandia_zebra
ENSFHEG00000000560	prpf6	90	97.714	ENSMZEG00005026539	prpf6	100	97.714	Maylandia_zebra
ENSFHEG00000000560	prpf6	94	93.675	ENSMGAG00000006634	PRPF6	100	93.675	Meleagris_gallopavo
ENSFHEG00000000560	prpf6	96	93.730	ENSMAUG00000013969	Prpf6	100	93.730	Mesocricetus_auratus
ENSFHEG00000000560	prpf6	84	92.579	ENSMICG00000017793	PRPF6	98	92.602	Microcebus_murinus
ENSFHEG00000000560	prpf6	96	93.624	ENSMOCG00000001701	Prpf6	100	93.624	Microtus_ochrogaster
ENSFHEG00000000560	prpf6	96	97.312	ENSMMOG00000020419	prpf6	100	97.312	Mola_mola
ENSFHEG00000000560	prpf6	94	94.328	ENSMODG00000017051	PRPF6	99	94.328	Monodelphis_domestica
ENSFHEG00000000560	prpf6	95	97.826	ENSMALG00000000089	prpf6	100	97.826	Monopterus_albus
ENSFHEG00000000560	prpf6	96	87.460	MGP_CAROLIEiJ_G0024814	Prpf6	100	94.444	Mus_caroli
ENSFHEG00000000560	prpf6	96	93.730	ENSMUSG00000002455	Prpf6	100	94.444	Mus_musculus
ENSFHEG00000000560	prpf6	96	93.730	MGP_PahariEiJ_G0026262	Prpf6	100	94.444	Mus_pahari
ENSFHEG00000000560	prpf6	96	93.730	MGP_SPRETEiJ_G0025741	Prpf6	100	94.444	Mus_spretus
ENSFHEG00000000560	prpf6	86	93.560	ENSMPUG00000008673	PRPF6	99	93.206	Mustela_putorius_furo
ENSFHEG00000000560	prpf6	96	93.836	ENSNGAG00000003365	Prpf6	100	93.836	Nannospalax_galili
ENSFHEG00000000560	prpf6	100	97.523	ENSNBRG00000015025	prpf6	100	97.523	Neolamprologus_brichardi
ENSFHEG00000000560	prpf6	96	92.774	ENSNLEG00000010208	PRPF6	100	92.774	Nomascus_leucogenys
ENSFHEG00000000560	prpf6	96	84.337	ENSMEUG00000009824	-	90	84.585	Notamacropus_eugenii
ENSFHEG00000000560	prpf6	96	87.779	ENSODEG00000004841	PRPF6	100	87.779	Octodon_degus
ENSFHEG00000000560	prpf6	100	97.626	ENSONIG00000017406	prpf6	100	97.626	Oreochromis_niloticus
ENSFHEG00000000560	prpf6	96	93.624	ENSOANG00000004920	PRPF6	100	93.624	Ornithorhynchus_anatinus
ENSFHEG00000000560	prpf6	95	91.416	ENSOCUG00000014151	PRPF6	100	91.416	Oryctolagus_cuniculus
ENSFHEG00000000560	prpf6	99	96.687	ENSORLG00000009592	prpf6	99	96.687	Oryzias_latipes
ENSFHEG00000000560	prpf6	99	96.791	ENSORLG00020001458	prpf6	99	96.791	Oryzias_latipes_hni
ENSFHEG00000000560	prpf6	99	96.791	ENSORLG00015018762	prpf6	99	96.791	Oryzias_latipes_hsok
ENSFHEG00000000560	prpf6	100	97.110	ENSOMEG00000012174	prpf6	100	97.110	Oryzias_melastigma
ENSFHEG00000000560	prpf6	96	86.518	ENSOGAG00000007573	PRPF6	100	86.518	Otolemur_garnettii
ENSFHEG00000000560	prpf6	96	92.774	ENSOARG00000008776	PRPF6	99	92.774	Ovis_aries
ENSFHEG00000000560	prpf6	96	92.880	ENSPPAG00000008686	PRPF6	100	92.880	Pan_paniscus
ENSFHEG00000000560	prpf6	96	93.305	ENSPPRG00000008497	PRPF6	100	93.305	Panthera_pardus
ENSFHEG00000000560	prpf6	94	93.239	ENSPTIG00000011184	PRPF6	97	93.239	Panthera_tigris_altaica
ENSFHEG00000000560	prpf6	96	92.880	ENSPTRG00000013765	PRPF6	100	92.880	Pan_troglodytes
ENSFHEG00000000560	prpf6	96	92.561	ENSPANG00000024135	PRPF6	100	92.561	Papio_anubis
ENSFHEG00000000560	prpf6	98	94.142	ENSPKIG00000005627	prpf6	99	95.106	Paramormyrops_kingsleyae
ENSFHEG00000000560	prpf6	90	93.311	ENSPSIG00000007717	PRPF6	100	93.311	Pelodiscus_sinensis
ENSFHEG00000000560	prpf6	100	94.324	ENSPMGG00000008925	prpf6	100	93.602	Periophthalmus_magnuspinnatus
ENSFHEG00000000560	prpf6	96	93.730	ENSPEMG00000016036	Prpf6	100	93.730	Peromyscus_maniculatus_bairdii
ENSFHEG00000000560	prpf6	96	88.806	ENSPMAG00000006144	prpf6	99	88.806	Petromyzon_marinus
ENSFHEG00000000560	prpf6	96	93.730	ENSPCIG00000017909	PRPF6	100	93.730	Phascolarctos_cinereus
ENSFHEG00000000560	prpf6	100	97.137	ENSPFOG00000006431	prpf6	99	97.137	Poecilia_formosa
ENSFHEG00000000560	prpf6	100	97.936	ENSPLAG00000005974	prpf6	100	97.936	Poecilia_latipinna
ENSFHEG00000000560	prpf6	100	98.142	ENSPMEG00000009977	prpf6	100	98.142	Poecilia_mexicana
ENSFHEG00000000560	prpf6	100	98.246	ENSPREG00000017993	prpf6	95	98.246	Poecilia_reticulata
ENSFHEG00000000560	prpf6	96	92.349	ENSPPYG00000011256	PRPF6	100	92.349	Pongo_abelii
ENSFHEG00000000560	prpf6	91	95.261	ENSPCAG00000006536	PRPF6	88	95.261	Procavia_capensis
ENSFHEG00000000560	prpf6	96	92.880	ENSPCOG00000016881	PRPF6	100	92.880	Propithecus_coquereli
ENSFHEG00000000560	prpf6	96	87.354	ENSPVAG00000014316	PRPF6	100	87.354	Pteropus_vampyrus
ENSFHEG00000000560	prpf6	100	83.470	ENSPNYG00000001939	prpf6	100	83.470	Pundamilia_nyererei
ENSFHEG00000000560	prpf6	97	95.445	ENSPNAG00000015606	prpf6	97	95.445	Pygocentrus_nattereri
ENSFHEG00000000560	prpf6	96	93.624	ENSRNOG00000051498	Prpf6	100	93.624	Rattus_norvegicus
ENSFHEG00000000560	prpf6	96	92.774	ENSRBIG00000043613	PRPF6	100	92.774	Rhinopithecus_bieti
ENSFHEG00000000560	prpf6	96	89.735	ENSRROG00000040969	PRPF6	98	93.080	Rhinopithecus_roxellana
ENSFHEG00000000560	prpf6	88	89.912	ENSSBOG00000020632	PRPF6	93	88.408	Saimiri_boliviensis_boliviensis
ENSFHEG00000000560	prpf6	96	93.730	ENSSHAG00000016810	PRPF6	100	93.730	Sarcophilus_harrisii
ENSFHEG00000000560	prpf6	95	95.269	ENSSFOG00015020859	prpf6	100	95.269	Scleropages_formosus
ENSFHEG00000000560	prpf6	99	95.967	ENSSMAG00000008112	prpf6	99	95.967	Scophthalmus_maximus
ENSFHEG00000000560	prpf6	99	97.001	ENSSDUG00000016142	prpf6	99	97.001	Seriola_dumerili
ENSFHEG00000000560	prpf6	99	97.001	ENSSLDG00000025283	prpf6	99	97.001	Seriola_lalandi_dorsalis
ENSFHEG00000000560	prpf6	90	92.168	ENSSPUG00000018260	PRPF6	100	92.168	Sphenodon_punctatus
ENSFHEG00000000560	prpf6	99	97.208	ENSSPAG00000015850	prpf6	99	97.208	Stegastes_partitus
ENSFHEG00000000560	prpf6	97	91.832	ENSSSCG00000029119	PRPF6	100	92.517	Sus_scrofa
ENSFHEG00000000560	prpf6	96	93.538	ENSTGUG00000007221	PRPF6	100	93.538	Taeniopygia_guttata
ENSFHEG00000000560	prpf6	100	96.285	ENSTRUG00000002920	prpf6	100	96.285	Takifugu_rubripes
ENSFHEG00000000560	prpf6	96	90.117	ENSTNIG00000017873	prpf6	100	90.117	Tetraodon_nigroviridis
ENSFHEG00000000560	prpf6	85	93.889	ENSTBEG00000005348	PRPF6	85	93.889	Tupaia_belangeri
ENSFHEG00000000560	prpf6	96	92.986	ENSTTRG00000013068	PRPF6	100	92.986	Tursiops_truncatus
ENSFHEG00000000560	prpf6	98	88.658	ENSUMAG00000021631	PRPF6	98	91.739	Ursus_maritimus
ENSFHEG00000000560	prpf6	96	93.305	ENSVVUG00000014948	PRPF6	100	93.305	Vulpes_vulpes
ENSFHEG00000000560	prpf6	96	92.979	ENSXETG00000012054	prpf6	97	92.979	Xenopus_tropicalis
ENSFHEG00000000560	prpf6	100	98.142	ENSXCOG00000008082	prpf6	100	98.142	Xiphophorus_couchianus
ENSFHEG00000000560	prpf6	100	98.246	ENSXMAG00000015581	prpf6	100	98.246	Xiphophorus_maculatus