EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSFHEG00000000618 (Gene tree)
Gene ID: 105936218
Gene Symbol: rbpms
Alias: si:cabz01079824.1
Full Name: RNA binding protein%2C mRNA processing factor
Gene Type: protein_coding
Species: Fundulus_heteroclitus
Status: putative
Strand: Minus strand
Length: 46462 bases
Position: chrKN805606.1:474198-520659
Accession: 105936218
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSFHEP00000008881	RRM_1	PF00076.22	3.1e-11	1	1
ENSFHEP00000008875	RRM_1	PF00076.22	1.3e-09	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSFHET00000001417	-	573	-	ENSFHEP00000008875	190 (aa)	-	-
ENSFHET00000001404	-	1087	XM_021323755	ENSFHEP00000008881	194 (aa)	XP_021179430	UPI0006448386

Gene Model

Click here to download ENSFHEG00000000618's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSFHEG00000000618's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSFHEG00000000618	rbpms	97	67.005	ENSFHEG00000014766	rbpms2b	75	69.036

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSFHEG00000000618	rbpms	99	84.536	ENSG00000157110	RBPMS	99	84.536	Homo_sapiens
ENSFHEG00000000618	rbpms	100	99.485	ENSAPOG00000022304	RBPMS	100	99.485	Acanthochromis_polyacanthus
ENSFHEG00000000618	rbpms	85	84.940	ENSAMEG00000001522	RBPMS	76	84.940	Ailuropoda_melanoleuca
ENSFHEG00000000618	rbpms	62	95.000	ENSACIG00000011395	RBPMS	77	82.639	Amphilophus_citrinellus
ENSFHEG00000000618	rbpms	100	99.485	ENSAOCG00000007731	RBPMS	100	99.485	Amphiprion_ocellaris
ENSFHEG00000000618	rbpms	100	99.485	ENSAPEG00000023543	RBPMS	100	99.485	Amphiprion_percula
ENSFHEG00000000618	rbpms	100	98.454	ENSATEG00000018184	RBPMS	100	98.454	Anabas_testudineus
ENSFHEG00000000618	rbpms	100	84.184	ENSACAG00000003012	RBPMS	100	82.653	Anolis_carolinensis
ENSFHEG00000000618	rbpms	99	84.536	ENSANAG00000028150	RBPMS	99	84.536	Aotus_nancymaae
ENSFHEG00000000618	rbpms	100	97.938	ENSACLG00000002926	RBPMS	100	97.938	Astatotilapia_calliptera
ENSFHEG00000000618	rbpms	99	92.708	ENSAMXG00000033491	rbpms	99	92.708	Astyanax_mexicanus
ENSFHEG00000000618	rbpms	99	83.505	ENSBTAG00000033727	RBPMS	80	84.000	Bos_taurus
ENSFHEG00000000618	rbpms	99	84.536	ENSCJAG00000012366	RBPMS	99	84.536	Callithrix_jacchus
ENSFHEG00000000618	rbpms	90	85.143	ENSCAFG00000006503	RBPMS	80	85.143	Canis_familiaris
ENSFHEG00000000618	rbpms	90	85.143	ENSCAFG00020001031	RBPMS	80	85.143	Canis_lupus_dingo
ENSFHEG00000000618	rbpms	99	77.949	ENSCHIG00000027156	RBPMS	99	77.949	Capra_hircus
ENSFHEG00000000618	rbpms	57	90.000	ENSTSYG00000013982	RBPMS	83	90.000	Carlito_syrichta
ENSFHEG00000000618	rbpms	99	84.536	ENSCPOG00000038597	RBPMS	99	84.536	Cavia_porcellus
ENSFHEG00000000618	rbpms	99	84.536	ENSCCAG00000033226	RBPMS	99	84.536	Cebus_capucinus
ENSFHEG00000000618	rbpms	99	84.536	ENSCATG00000036486	RBPMS	99	84.536	Cercocebus_atys
ENSFHEG00000000618	rbpms	89	87.931	ENSCLAG00000001518	RBPMS	100	87.931	Chinchilla_lanigera
ENSFHEG00000000618	rbpms	90	85.143	ENSCSAG00000015838	RBPMS	80	85.143	Chlorocebus_sabaeus
ENSFHEG00000000618	rbpms	79	89.032	ENSCHOG00000008745	RBPMS	79	89.032	Choloepus_hoffmanni
ENSFHEG00000000618	rbpms	100	82.564	ENSCPBG00000013437	RBPMS	100	82.564	Chrysemys_picta_bellii
ENSFHEG00000000618	rbpms	89	87.931	ENSCANG00000034997	RBPMS	100	87.931	Colobus_angolensis_palliatus
ENSFHEG00000000618	rbpms	99	79.487	ENSCGRG00001002814	Rbpms	99	83.590	Cricetulus_griseus_chok1gshd
ENSFHEG00000000618	rbpms	89	82.857	ENSCGRG00000006095	Rbpms	100	87.429	Cricetulus_griseus_crigri
ENSFHEG00000000618	rbpms	100	96.907	ENSCSEG00000002777	rbpms	100	96.907	Cynoglossus_semilaevis
ENSFHEG00000000618	rbpms	100	99.485	ENSCVAG00000013975	RBPMS	100	99.485	Cyprinodon_variegatus
ENSFHEG00000000618	rbpms	87	71.598	ENSDARG00000099396	rbpms	100	71.598	Danio_rerio
ENSFHEG00000000618	rbpms	90	85.143	ENSDNOG00000008126	RBPMS	80	85.143	Dasypus_novemcinctus
ENSFHEG00000000618	rbpms	90	85.714	ENSETEG00000017582	RBPMS	80	85.714	Echinops_telfairi
ENSFHEG00000000618	rbpms	79	89.032	ENSEASG00005016962	RBPMS	78	89.032	Equus_asinus_asinus
ENSFHEG00000000618	rbpms	90	84.571	ENSECAG00000020735	RBPMS	78	89.032	Equus_caballus
ENSFHEG00000000618	rbpms	100	92.784	ENSELUG00000009787	rbpms	100	92.784	Esox_lucius
ENSFHEG00000000618	rbpms	88	52.907	ENSFCAG00000022292	-	93	47.959	Felis_catus
ENSFHEG00000000618	rbpms	99	84.021	ENSFCAG00000025639	-	99	84.021	Felis_catus
ENSFHEG00000000618	rbpms	89	87.931	ENSFDAG00000012078	RBPMS	100	87.931	Fukomys_damarensis
ENSFHEG00000000618	rbpms	77	60.667	ENSGMOG00000009646	-	100	60.667	Gadus_morhua
ENSFHEG00000000618	rbpms	100	98.969	ENSGAFG00000016566	RBPMS	100	98.969	Gambusia_affinis
ENSFHEG00000000618	rbpms	100	87.113	ENSGACG00000019471	rbpms	100	87.113	Gasterosteus_aculeatus
ENSFHEG00000000618	rbpms	60	85.345	ENSGAGG00000023634	RBPMS	54	83.065	Gopherus_agassizii
ENSFHEG00000000618	rbpms	100	97.938	ENSHBUG00000005888	RBPMS	100	97.938	Haplochromis_burtoni
ENSFHEG00000000618	rbpms	99	84.536	ENSHGLG00000002303	RBPMS	99	84.536	Heterocephalus_glaber_female
ENSFHEG00000000618	rbpms	89	87.931	ENSHGLG00100008787	RBPMS	100	87.931	Heterocephalus_glaber_male
ENSFHEG00000000618	rbpms	98	97.382	ENSHCOG00000005774	rbpms	99	97.382	Hippocampus_comes
ENSFHEG00000000618	rbpms	100	88.718	ENSIPUG00000012459	RBPMS	100	88.718	Ictalurus_punctatus
ENSFHEG00000000618	rbpms	99	84.021	ENSSTOG00000026546	RBPMS	99	84.021	Ictidomys_tridecemlineatus
ENSFHEG00000000618	rbpms	99	84.536	ENSJJAG00000014024	Rbpms	99	84.536	Jaculus_jaculus
ENSFHEG00000000618	rbpms	89	78.286	ENSKMAG00000006377	RBPMS	88	81.143	Kryptolebias_marmoratus
ENSFHEG00000000618	rbpms	100	98.454	ENSLBEG00000027989	RBPMS	100	98.454	Labrus_bergylta
ENSFHEG00000000618	rbpms	90	92.000	ENSLOCG00000013199	RBPMS	96	92.000	Lepisosteus_oculatus
ENSFHEG00000000618	rbpms	90	85.143	ENSLAFG00000000209	RBPMS	80	85.143	Loxodonta_africana
ENSFHEG00000000618	rbpms	99	84.536	ENSMFAG00000036911	RBPMS	99	84.536	Macaca_fascicularis
ENSFHEG00000000618	rbpms	99	84.536	ENSMMUG00000000458	RBPMS	99	84.536	Macaca_mulatta
ENSFHEG00000000618	rbpms	99	84.536	ENSMNEG00000043805	RBPMS	99	84.536	Macaca_nemestrina
ENSFHEG00000000618	rbpms	89	87.931	ENSMLEG00000015635	RBPMS	100	87.931	Mandrillus_leucophaeus
ENSFHEG00000000618	rbpms	95	76.757	ENSMAMG00000004604	RBPMS	94	76.757	Mastacembelus_armatus
ENSFHEG00000000618	rbpms	100	97.938	ENSMZEG00005000698	RBPMS	100	97.938	Maylandia_zebra
ENSFHEG00000000618	rbpms	90	85.143	ENSMGAG00000005088	RBPMS	90	85.143	Meleagris_gallopavo
ENSFHEG00000000618	rbpms	99	79.487	ENSMAUG00000018892	Rbpms	99	83.590	Mesocricetus_auratus
ENSFHEG00000000618	rbpms	99	80.412	ENSMICG00000001295	RBPMS	99	84.021	Microcebus_murinus
ENSFHEG00000000618	rbpms	99	79.487	ENSMOCG00000014009	Rbpms	99	83.590	Microtus_ochrogaster
ENSFHEG00000000618	rbpms	82	95.597	ENSMMOG00000012036	RBPMS	67	95.597	Mola_mola
ENSFHEG00000000618	rbpms	97	84.127	ENSMODG00000019006	RBPMS	89	84.127	Monodelphis_domestica
ENSFHEG00000000618	rbpms	100	96.392	ENSMALG00000003261	RBPMS	100	96.392	Monopterus_albus
ENSFHEG00000000618	rbpms	99	78.974	MGP_CAROLIEiJ_G0030970	Rbpms	99	83.077	Mus_caroli
ENSFHEG00000000618	rbpms	99	78.974	ENSMUSG00000031586	Rbpms	99	83.077	Mus_musculus
ENSFHEG00000000618	rbpms	100	79.695	MGP_PahariEiJ_G0021439	Rbpms	100	83.756	Mus_pahari
ENSFHEG00000000618	rbpms	99	78.974	MGP_SPRETEiJ_G0032087	Rbpms	99	83.077	Mus_spretus
ENSFHEG00000000618	rbpms	85	84.431	ENSMPUG00000011314	RBPMS	76	84.940	Mustela_putorius_furo
ENSFHEG00000000618	rbpms	99	84.536	ENSMLUG00000009391	RBPMS	99	85.897	Myotis_lucifugus
ENSFHEG00000000618	rbpms	90	85.143	ENSNGAG00000011141	Rbpms	80	85.143	Nannospalax_galili
ENSFHEG00000000618	rbpms	90	99.425	ENSNBRG00000003313	RBPMS	97	99.425	Neolamprologus_brichardi
ENSFHEG00000000618	rbpms	99	84.536	ENSNLEG00000036183	-	99	84.536	Nomascus_leucogenys
ENSFHEG00000000618	rbpms	67	84.615	ENSOPRG00000013151	RBPMS	59	84.615	Ochotona_princeps
ENSFHEG00000000618	rbpms	99	84.536	ENSODEG00000006700	RBPMS	99	84.536	Octodon_degus
ENSFHEG00000000618	rbpms	90	99.425	ENSONIG00000007546	RBPMS	100	99.425	Oreochromis_niloticus
ENSFHEG00000000618	rbpms	90	85.143	ENSOCUG00000008572	RBPMS	80	85.143	Oryctolagus_cuniculus
ENSFHEG00000000618	rbpms	100	96.907	ENSORLG00000004135	-	100	96.907	Oryzias_latipes
ENSFHEG00000000618	rbpms	100	96.907	ENSORLG00020016179	RBPMS	100	96.907	Oryzias_latipes_hni
ENSFHEG00000000618	rbpms	100	96.907	ENSORLG00015013770	RBPMS	100	96.907	Oryzias_latipes_hsok
ENSFHEG00000000618	rbpms	100	97.938	ENSOMEG00000005044	RBPMS	100	97.938	Oryzias_melastigma
ENSFHEG00000000618	rbpms	92	83.799	ENSOGAG00000030298	RBPMS	80	83.799	Otolemur_garnettii
ENSFHEG00000000618	rbpms	65	83.333	ENSOARG00000010366	RBPMS	89	83.333	Ovis_aries
ENSFHEG00000000618	rbpms	89	87.931	ENSPPAG00000033108	RBPMS	100	87.931	Pan_paniscus
ENSFHEG00000000618	rbpms	99	84.021	ENSPPRG00000004836	RBPMS	99	84.021	Panthera_pardus
ENSFHEG00000000618	rbpms	89	87.931	ENSPTIG00000015964	RBPMS	89	87.931	Panthera_tigris_altaica
ENSFHEG00000000618	rbpms	99	84.536	ENSPTRG00000020135	RBPMS	99	84.536	Pan_troglodytes
ENSFHEG00000000618	rbpms	99	84.536	ENSPANG00000008143	RBPMS	99	84.536	Papio_anubis
ENSFHEG00000000618	rbpms	97	88.889	ENSPKIG00000004836	rbpms	100	88.889	Paramormyrops_kingsleyae
ENSFHEG00000000618	rbpms	100	91.237	ENSPKIG00000000535	-	100	91.237	Paramormyrops_kingsleyae
ENSFHEG00000000618	rbpms	89	86.207	ENSPSIG00000006136	RBPMS	99	86.207	Pelodiscus_sinensis
ENSFHEG00000000618	rbpms	81	97.468	ENSPMGG00000018012	RBPMS	74	97.468	Periophthalmus_magnuspinnatus
ENSFHEG00000000618	rbpms	99	79.592	ENSPEMG00000021130	Rbpms	100	83.333	Peromyscus_maniculatus_bairdii
ENSFHEG00000000618	rbpms	92	85.556	ENSPCIG00000019298	-	71	83.041	Phascolarctos_cinereus
ENSFHEG00000000618	rbpms	100	98.969	ENSPFOG00000017158	RBPMS	100	98.969	Poecilia_formosa
ENSFHEG00000000618	rbpms	100	98.969	ENSPLAG00000010767	RBPMS	100	98.969	Poecilia_latipinna
ENSFHEG00000000618	rbpms	100	98.969	ENSPMEG00000009788	RBPMS	100	98.969	Poecilia_mexicana
ENSFHEG00000000618	rbpms	100	98.969	ENSPREG00000016959	RBPMS	100	98.969	Poecilia_reticulata
ENSFHEG00000000618	rbpms	90	85.143	ENSPPYG00000018487	RBPMS	80	85.143	Pongo_abelii
ENSFHEG00000000618	rbpms	57	90.000	ENSPCAG00000013493	-	100	90.000	Procavia_capensis
ENSFHEG00000000618	rbpms	92	69.274	ENSPCOG00000015948	RBPMS	86	70.286	Propithecus_coquereli
ENSFHEG00000000618	rbpms	90	84.571	ENSPVAG00000001661	RBPMS	80	84.571	Pteropus_vampyrus
ENSFHEG00000000618	rbpms	100	97.938	ENSPNYG00000001172	RBPMS	100	97.938	Pundamilia_nyererei
ENSFHEG00000000618	rbpms	99	96.354	ENSPNAG00000029160	RBPMS	99	96.354	Pygocentrus_nattereri
ENSFHEG00000000618	rbpms	92	78.571	ENSRNOG00000013328	Rbpms	88	82.967	Rattus_norvegicus
ENSFHEG00000000618	rbpms	89	87.931	ENSRBIG00000038218	RBPMS	100	87.931	Rhinopithecus_bieti
ENSFHEG00000000618	rbpms	99	84.536	ENSRROG00000042518	RBPMS	99	84.536	Rhinopithecus_roxellana
ENSFHEG00000000618	rbpms	99	84.021	ENSSBOG00000026670	RBPMS	99	84.021	Saimiri_boliviensis_boliviensis
ENSFHEG00000000618	rbpms	90	88.000	ENSSHAG00000010114	RBPMS	90	88.000	Sarcophilus_harrisii
ENSFHEG00000000618	rbpms	90	89.655	ENSSFOG00015017481	-	100	86.772	Scleropages_formosus
ENSFHEG00000000618	rbpms	100	90.722	ENSSFOG00015000417	rbpms	100	90.722	Scleropages_formosus
ENSFHEG00000000618	rbpms	100	96.907	ENSSMAG00000010871	rbpms	100	96.907	Scophthalmus_maximus
ENSFHEG00000000618	rbpms	100	98.969	ENSSDUG00000010894	RBPMS	100	98.969	Seriola_dumerili
ENSFHEG00000000618	rbpms	100	98.969	ENSSLDG00000012916	RBPMS	100	98.969	Seriola_lalandi_dorsalis
ENSFHEG00000000618	rbpms	90	81.921	ENSSARG00000000274	RBPMS	81	81.921	Sorex_araneus
ENSFHEG00000000618	rbpms	94	83.060	ENSSPUG00000017525	RBPMS	70	83.060	Sphenodon_punctatus
ENSFHEG00000000618	rbpms	89	77.457	ENSSPAG00000004777	rbpms	82	96.296	Stegastes_partitus
ENSFHEG00000000618	rbpms	99	84.021	ENSSSCG00000015846	RBPMS	99	84.021	Sus_scrofa
ENSFHEG00000000618	rbpms	97	82.540	ENSTGUG00000001776	RBPMS	99	82.540	Taeniopygia_guttata
ENSFHEG00000000618	rbpms	100	97.423	ENSTRUG00000000041	RBPMS	100	97.423	Takifugu_rubripes
ENSFHEG00000000618	rbpms	90	84.483	ENSTTRG00000012451	RBPMS	80	84.483	Tursiops_truncatus
ENSFHEG00000000618	rbpms	60	86.207	ENSUAMG00000026353	RBPMS	76	86.207	Ursus_americanus
ENSFHEG00000000618	rbpms	85	86.667	ENSUMAG00000007347	RBPMS	76	88.462	Ursus_maritimus
ENSFHEG00000000618	rbpms	79	89.032	ENSVPAG00000010991	RBPMS	79	89.032	Vicugna_pacos
ENSFHEG00000000618	rbpms	99	84.536	ENSVVUG00000019770	RBPMS	99	84.536	Vulpes_vulpes
ENSFHEG00000000618	rbpms	89	87.931	ENSXETG00000011290	rbpms	100	87.931	Xenopus_tropicalis
ENSFHEG00000000618	rbpms	89	99.412	ENSXCOG00000002436	RBPMS	89	99.412	Xiphophorus_couchianus
ENSFHEG00000000618	rbpms	100	98.969	ENSXMAG00000027637	RBPMS	100	98.969	Xiphophorus_maculatus