EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSFHEG00000000655 (Gene tree)
Gene ID: 105925761
Gene Symbol: NCBP1
Alias: CBP80|NCBP|Sto1
Full Name: nuclear cap binding protein subunit 1
Gene Type: protein_coding
Species: Fundulus_heteroclitus
Status: putative
Strand: Minus strand
Length: 15216 bases
Position: chrKN811289.1:6072305-6087520
Accession: 105925761
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSFHEP00000011932	MIF4G_like	PF09088.11	1.8e-37	1	1
ENSFHEP00000011943	MIF4G_like	PF09088.11	1.8e-37	1	1
ENSFHEP00000011912	MIF4G_like	PF09088.11	2e-27	1	1
ENSFHEP00000011912	MIF4G_like_2	PF09090.11	1.8e-86	1	1
ENSFHEP00000011932	MIF4G_like_2	PF09090.11	2.1e-86	1	1
ENSFHEP00000011943	MIF4G_like_2	PF09090.11	2.1e-86	1	1
ENSFHEP00000011912	MIF4G	PF02854.19	9e-28	1	1
ENSFHEP00000011932	MIF4G	PF02854.19	1.3e-27	1	1
ENSFHEP00000011943	MIF4G	PF02854.19	1.3e-27	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSFHET00000019050	NCBP1-201	2328	-	ENSFHEP00000011912	775 (aa)	-	-
ENSFHET00000031789	NCBP1-203	3790	XM_012861759	ENSFHEP00000011943	796 (aa)	XP_012717213	UPI000644A83E
ENSFHET00000019070	NCBP1-202	3713	-	ENSFHEP00000011932	796 (aa)	-	UPI000644A83E

Gene Model

Click here to download ENSFHEG00000000655's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSFHEG00000000655's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSFHEG00000000655	NCBP1	99	81.887	ENSG00000136937	NCBP1	99	82.390	Homo_sapiens
ENSFHEG00000000655	NCBP1	100	95.352	ENSAPOG00000008002	NCBP1	100	95.352	Acanthochromis_polyacanthus
ENSFHEG00000000655	NCBP1	99	82.058	ENSAMEG00000004763	NCBP1	99	82.560	Ailuropoda_melanoleuca
ENSFHEG00000000655	NCBP1	100	94.849	ENSACIG00000000274	NCBP1	100	94.849	Amphilophus_citrinellus
ENSFHEG00000000655	NCBP1	100	95.226	ENSAOCG00000021148	NCBP1	100	95.226	Amphiprion_ocellaris
ENSFHEG00000000655	NCBP1	100	95.226	ENSAPEG00000001701	NCBP1	100	95.226	Amphiprion_percula
ENSFHEG00000000655	NCBP1	100	95.477	ENSATEG00000006929	NCBP1	100	95.477	Anabas_testudineus
ENSFHEG00000000655	NCBP1	95	82.392	ENSAPLG00000016318	NCBP1	99	82.654	Anas_platyrhynchos
ENSFHEG00000000655	NCBP1	99	82.772	ENSACAG00000004409	NCBP1	87	83.021	Anolis_carolinensis
ENSFHEG00000000655	NCBP1	99	79.874	ENSANAG00000025744	NCBP1	99	81.818	Aotus_nancymaae
ENSFHEG00000000655	NCBP1	100	94.598	ENSACLG00000014812	NCBP1	100	94.598	Astatotilapia_calliptera
ENSFHEG00000000655	NCBP1	100	90.966	ENSAMXG00000016364	NCBP1	100	90.966	Astyanax_mexicanus
ENSFHEG00000000655	NCBP1	99	82.013	ENSBTAG00000009732	NCBP1	99	87.009	Bos_taurus
ENSFHEG00000000655	NCBP1	100	36.039	WBGene00018156	ncbp-1	100	36.039	Caenorhabditis_elegans
ENSFHEG00000000655	NCBP1	99	82.013	ENSCJAG00000010840	NCBP1	99	85.903	Callithrix_jacchus
ENSFHEG00000000655	NCBP1	99	82.138	ENSCAFG00000002445	NCBP1	99	82.642	Canis_familiaris
ENSFHEG00000000655	NCBP1	98	81.865	ENSCAFG00020017997	NCBP1	96	87.811	Canis_lupus_dingo
ENSFHEG00000000655	NCBP1	99	81.887	ENSCHIG00000020139	NCBP1	99	82.390	Capra_hircus
ENSFHEG00000000655	NCBP1	51	87.313	ENSTSYG00000011914	NCBP1	98	86.207	Carlito_syrichta
ENSFHEG00000000655	NCBP1	81	74.034	ENSCAPG00000014252	NCBP1	90	74.034	Cavia_aperea
ENSFHEG00000000655	NCBP1	95	81.266	ENSCPOG00000012573	NCBP1	98	81.794	Cavia_porcellus
ENSFHEG00000000655	NCBP1	99	81.887	ENSCCAG00000032297	NCBP1	99	82.390	Cebus_capucinus
ENSFHEG00000000655	NCBP1	99	81.887	ENSCATG00000010052	NCBP1	99	82.390	Cercocebus_atys
ENSFHEG00000000655	NCBP1	99	81.887	ENSCLAG00000014339	NCBP1	99	82.390	Chinchilla_lanigera
ENSFHEG00000000655	NCBP1	99	81.887	ENSCSAG00000010929	NCBP1	99	82.390	Chlorocebus_sabaeus
ENSFHEG00000000655	NCBP1	89	82.857	ENSCHOG00000010332	NCBP1	91	76.471	Choloepus_hoffmanni
ENSFHEG00000000655	NCBP1	99	81.132	ENSCPBG00000024344	NCBP1	99	83.196	Chrysemys_picta_bellii
ENSFHEG00000000655	NCBP1	99	54.214	ENSCING00000008990	-	99	54.214	Ciona_intestinalis
ENSFHEG00000000655	NCBP1	99	53.308	ENSCSAVG00000005300	-	99	52.308	Ciona_savignyi
ENSFHEG00000000655	NCBP1	99	81.887	ENSCANG00000036913	NCBP1	99	82.390	Colobus_angolensis_palliatus
ENSFHEG00000000655	NCBP1	99	81.384	ENSCGRG00001015771	Ncbp1	99	81.887	Cricetulus_griseus_chok1gshd
ENSFHEG00000000655	NCBP1	99	81.274	ENSCGRG00000010311	Ncbp1	99	81.783	Cricetulus_griseus_crigri
ENSFHEG00000000655	NCBP1	100	93.844	ENSCSEG00000012377	NCBP1	100	93.844	Cynoglossus_semilaevis
ENSFHEG00000000655	NCBP1	100	97.990	ENSCVAG00000008795	NCBP1	100	97.990	Cyprinodon_variegatus
ENSFHEG00000000655	NCBP1	99	81.384	ENSDNOG00000006885	NCBP1	99	81.887	Dasypus_novemcinctus
ENSFHEG00000000655	NCBP1	99	77.722	ENSDORG00000013652	Ncbp1	99	78.223	Dipodomys_ordii
ENSFHEG00000000655	NCBP1	82	33.284	FBgn0038887	CG7907	87	33.284	Drosophila_melanogaster
ENSFHEG00000000655	NCBP1	99	56.489	FBgn0022942	Cbp80	99	57.196	Drosophila_melanogaster
ENSFHEG00000000655	NCBP1	89	77.754	ENSETEG00000009705	NCBP1	89	77.754	Echinops_telfairi
ENSFHEG00000000655	NCBP1	99	73.241	ENSEBUG00000008386	NCBP1	99	73.241	Eptatretus_burgeri
ENSFHEG00000000655	NCBP1	99	81.635	ENSEASG00005022795	NCBP1	99	82.138	Equus_asinus_asinus
ENSFHEG00000000655	NCBP1	99	81.761	ENSECAG00000013847	NCBP1	99	82.264	Equus_caballus
ENSFHEG00000000655	NCBP1	95	77.763	ENSEEUG00000015973	NCBP1	99	78.100	Erinaceus_europaeus
ENSFHEG00000000655	NCBP1	100	90.590	ENSELUG00000022519	NCBP1	100	90.590	Esox_lucius
ENSFHEG00000000655	NCBP1	99	82.013	ENSFCAG00000001206	NCBP1	99	82.516	Felis_catus
ENSFHEG00000000655	NCBP1	98	83.588	ENSFALG00000001193	NCBP1	99	83.588	Ficedula_albicollis
ENSFHEG00000000655	NCBP1	99	81.635	ENSFDAG00000010864	NCBP1	99	82.138	Fukomys_damarensis
ENSFHEG00000000655	NCBP1	100	90.590	ENSGMOG00000008653	NCBP1	99	90.590	Gadus_morhua
ENSFHEG00000000655	NCBP1	98	83.269	ENSGALG00000002087	NCBP1	99	83.187	Gallus_gallus
ENSFHEG00000000655	NCBP1	100	97.864	ENSGAFG00000017787	NCBP1	100	97.864	Gambusia_affinis
ENSFHEG00000000655	NCBP1	100	92.741	ENSGACG00000016772	NCBP1	99	92.741	Gasterosteus_aculeatus
ENSFHEG00000000655	NCBP1	99	83.522	ENSGAGG00000019483	NCBP1	99	83.522	Gopherus_agassizii
ENSFHEG00000000655	NCBP1	99	81.887	ENSGGOG00000001376	NCBP1	99	82.390	Gorilla_gorilla
ENSFHEG00000000655	NCBP1	100	94.598	ENSHBUG00000020843	NCBP1	100	94.598	Haplochromis_burtoni
ENSFHEG00000000655	NCBP1	99	72.020	ENSHGLG00000018112	-	99	72.020	Heterocephalus_glaber_female
ENSFHEG00000000655	NCBP1	99	81.761	ENSHGLG00000001882	NCBP1	99	82.264	Heterocephalus_glaber_female
ENSFHEG00000000655	NCBP1	99	71.769	ENSHGLG00100017373	-	99	71.769	Heterocephalus_glaber_male
ENSFHEG00000000655	NCBP1	99	81.761	ENSHGLG00100013014	NCBP1	99	82.264	Heterocephalus_glaber_male
ENSFHEG00000000655	NCBP1	74	87.037	ENSHCOG00000000204	NCBP1	87	87.037	Hippocampus_comes
ENSFHEG00000000655	NCBP1	100	89.460	ENSIPUG00000007275	ncbp1	100	89.460	Ictalurus_punctatus
ENSFHEG00000000655	NCBP1	99	82.013	ENSSTOG00000002695	NCBP1	99	82.516	Ictidomys_tridecemlineatus
ENSFHEG00000000655	NCBP1	100	95.729	ENSKMAG00000003594	NCBP1	100	95.729	Kryptolebias_marmoratus
ENSFHEG00000000655	NCBP1	100	94.052	ENSLBEG00000011661	NCBP1	100	94.052	Labrus_bergylta
ENSFHEG00000000655	NCBP1	99	76.961	ENSLACG00000013955	NCBP1	99	77.764	Latimeria_chalumnae
ENSFHEG00000000655	NCBP1	99	76.741	ENSLOCG00000009579	NCBP1	99	77.239	Lepisosteus_oculatus
ENSFHEG00000000655	NCBP1	99	81.761	ENSLAFG00000005999	NCBP1	99	82.264	Loxodonta_africana
ENSFHEG00000000655	NCBP1	99	81.887	ENSMFAG00000030994	NCBP1	99	82.390	Macaca_fascicularis
ENSFHEG00000000655	NCBP1	98	81.633	ENSMMUG00000012281	NCBP1	99	82.178	Macaca_mulatta
ENSFHEG00000000655	NCBP1	99	81.887	ENSMNEG00000042790	NCBP1	99	82.390	Macaca_nemestrina
ENSFHEG00000000655	NCBP1	99	81.887	ENSMLEG00000030374	NCBP1	99	82.390	Mandrillus_leucophaeus
ENSFHEG00000000655	NCBP1	100	94.724	ENSMAMG00000014806	NCBP1	100	94.724	Mastacembelus_armatus
ENSFHEG00000000655	NCBP1	97	92.387	ENSMZEG00005009290	-	100	92.387	Maylandia_zebra
ENSFHEG00000000655	NCBP1	100	94.598	ENSMZEG00005003469	NCBP1	100	94.598	Maylandia_zebra
ENSFHEG00000000655	NCBP1	99	80.784	ENSMAUG00000020583	Ncbp1	99	81.290	Mesocricetus_auratus
ENSFHEG00000000655	NCBP1	99	81.384	ENSMICG00000012682	NCBP1	99	81.887	Microcebus_murinus
ENSFHEG00000000655	NCBP1	99	81.258	ENSMOCG00000015818	Ncbp1	99	81.761	Microtus_ochrogaster
ENSFHEG00000000655	NCBP1	91	92.382	ENSMMOG00000002610	NCBP1	100	92.382	Mola_mola
ENSFHEG00000000655	NCBP1	99	81.132	ENSMODG00000003202	NCBP1	99	81.509	Monodelphis_domestica
ENSFHEG00000000655	NCBP1	100	94.975	ENSMALG00000003547	NCBP1	100	94.975	Monopterus_albus
ENSFHEG00000000655	NCBP1	99	81.761	MGP_CAROLIEiJ_G0025982	Ncbp1	99	82.264	Mus_caroli
ENSFHEG00000000655	NCBP1	99	81.761	ENSMUSG00000028330	Ncbp1	99	82.264	Mus_musculus
ENSFHEG00000000655	NCBP1	99	81.761	MGP_PahariEiJ_G0028318	Ncbp1	99	82.264	Mus_pahari
ENSFHEG00000000655	NCBP1	99	81.761	MGP_SPRETEiJ_G0026945	Ncbp1	99	82.264	Mus_spretus
ENSFHEG00000000655	NCBP1	99	82.264	ENSMPUG00000006399	NCBP1	99	82.767	Mustela_putorius_furo
ENSFHEG00000000655	NCBP1	98	80.740	ENSMLUG00000015201	NCBP1	99	81.250	Myotis_lucifugus
ENSFHEG00000000655	NCBP1	99	82.264	ENSNGAG00000014101	Ncbp1	99	82.264	Nannospalax_galili
ENSFHEG00000000655	NCBP1	78	98.238	ENSNBRG00000014674	NCBP1	98	98.238	Neolamprologus_brichardi
ENSFHEG00000000655	NCBP1	99	81.887	ENSNLEG00000016909	NCBP1	99	82.390	Nomascus_leucogenys
ENSFHEG00000000655	NCBP1	89	80.793	ENSMEUG00000010672	NCBP1	90	80.793	Notamacropus_eugenii
ENSFHEG00000000655	NCBP1	78	85.789	ENSOPRG00000002144	-	88	74.622	Ochotona_princeps
ENSFHEG00000000655	NCBP1	99	81.887	ENSODEG00000003232	NCBP1	99	82.390	Octodon_degus
ENSFHEG00000000655	NCBP1	100	94.598	ENSONIG00000001502	NCBP1	100	94.598	Oreochromis_niloticus
ENSFHEG00000000655	NCBP1	78	84.751	ENSOANG00000001918	NCBP1	100	84.751	Ornithorhynchus_anatinus
ENSFHEG00000000655	NCBP1	98	81.122	ENSOCUG00000013853	NCBP1	97	81.633	Oryctolagus_cuniculus
ENSFHEG00000000655	NCBP1	100	94.875	ENSORLG00000011008	NCBP1	100	94.875	Oryzias_latipes
ENSFHEG00000000655	NCBP1	100	95.125	ENSORLG00020017455	NCBP1	100	95.125	Oryzias_latipes_hni
ENSFHEG00000000655	NCBP1	100	95.000	ENSORLG00015012127	NCBP1	100	95.000	Oryzias_latipes_hsok
ENSFHEG00000000655	NCBP1	100	95.125	ENSOMEG00000020698	NCBP1	100	95.125	Oryzias_melastigma
ENSFHEG00000000655	NCBP1	99	81.807	ENSOGAG00000013888	NCBP1	99	82.309	Otolemur_garnettii
ENSFHEG00000000655	NCBP1	99	81.887	ENSOARG00000011233	NCBP1	99	82.390	Ovis_aries
ENSFHEG00000000655	NCBP1	99	81.887	ENSPPAG00000026462	NCBP1	99	82.390	Pan_paniscus
ENSFHEG00000000655	NCBP1	99	82.138	ENSPPRG00000022574	NCBP1	99	82.642	Panthera_pardus
ENSFHEG00000000655	NCBP1	99	82.138	ENSPTIG00000018507	NCBP1	99	82.642	Panthera_tigris_altaica
ENSFHEG00000000655	NCBP1	99	81.887	ENSPTRG00000021167	NCBP1	99	82.390	Pan_troglodytes
ENSFHEG00000000655	NCBP1	99	81.887	ENSPANG00000025591	NCBP1	99	82.390	Papio_anubis
ENSFHEG00000000655	NCBP1	99	87.170	ENSPKIG00000015861	NCBP1	99	87.170	Paramormyrops_kingsleyae
ENSFHEG00000000655	NCBP1	64	81.445	ENSPSIG00000009558	NCBP1	99	81.445	Pelodiscus_sinensis
ENSFHEG00000000655	NCBP1	100	90.088	ENSPMGG00000020476	NCBP1	100	90.088	Periophthalmus_magnuspinnatus
ENSFHEG00000000655	NCBP1	99	80.881	ENSPEMG00000020105	Ncbp1	99	81.384	Peromyscus_maniculatus_bairdii
ENSFHEG00000000655	NCBP1	99	68.539	ENSPMAG00000005533	NCBP1	99	68.539	Petromyzon_marinus
ENSFHEG00000000655	NCBP1	99	81.132	ENSPCIG00000015800	NCBP1	99	84.141	Phascolarctos_cinereus
ENSFHEG00000000655	NCBP1	100	97.247	ENSPFOG00000004158	NCBP1	100	97.247	Poecilia_formosa
ENSFHEG00000000655	NCBP1	100	97.864	ENSPLAG00000020002	NCBP1	100	97.864	Poecilia_latipinna
ENSFHEG00000000655	NCBP1	100	97.613	ENSPMEG00000019821	NCBP1	100	97.613	Poecilia_mexicana
ENSFHEG00000000655	NCBP1	100	97.240	ENSPREG00000006035	NCBP1	100	97.240	Poecilia_reticulata
ENSFHEG00000000655	NCBP1	99	81.887	ENSPPYG00000019426	NCBP1	99	82.390	Pongo_abelii
ENSFHEG00000000655	NCBP1	91	79.758	ENSPCAG00000009943	NCBP1	90	79.758	Procavia_capensis
ENSFHEG00000000655	NCBP1	82	87.500	ENSPCOG00000020024	NCBP1	98	87.500	Propithecus_coquereli
ENSFHEG00000000655	NCBP1	99	81.761	ENSPVAG00000005924	NCBP1	99	82.264	Pteropus_vampyrus
ENSFHEG00000000655	NCBP1	91	93.204	ENSPNYG00000002140	NCBP1	99	93.204	Pundamilia_nyererei
ENSFHEG00000000655	NCBP1	100	89.348	ENSPNAG00000027753	NCBP1	100	89.348	Pygocentrus_nattereri
ENSFHEG00000000655	NCBP1	99	81.635	ENSRNOG00000023605	Ncbp1	99	82.138	Rattus_norvegicus
ENSFHEG00000000655	NCBP1	99	81.887	ENSRBIG00000043175	NCBP1	99	82.390	Rhinopithecus_bieti
ENSFHEG00000000655	NCBP1	99	81.887	ENSRROG00000029767	NCBP1	99	82.390	Rhinopithecus_roxellana
ENSFHEG00000000655	NCBP1	99	81.887	ENSSBOG00000019378	NCBP1	98	86.829	Saimiri_boliviensis_boliviensis
ENSFHEG00000000655	NCBP1	71	77.344	ENSSHAG00000015882	NCBP1	73	78.516	Sarcophilus_harrisii
ENSFHEG00000000655	NCBP1	98	85.204	ENSSFOG00015001872	NCBP1	99	84.403	Scleropages_formosus
ENSFHEG00000000655	NCBP1	100	93.467	ENSSMAG00000007463	NCBP1	100	93.467	Scophthalmus_maximus
ENSFHEG00000000655	NCBP1	100	94.095	ENSSDUG00000007019	NCBP1	100	95.068	Seriola_dumerili
ENSFHEG00000000655	NCBP1	100	95.101	ENSSLDG00000021924	NCBP1	100	95.101	Seriola_lalandi_dorsalis
ENSFHEG00000000655	NCBP1	85	70.626	ENSSARG00000007274	NCBP1	86	71.490	Sorex_araneus
ENSFHEG00000000655	NCBP1	99	76.855	ENSSPUG00000008609	NCBP1	99	77.107	Sphenodon_punctatus
ENSFHEG00000000655	NCBP1	100	96.231	ENSSPAG00000012550	NCBP1	100	96.231	Stegastes_partitus
ENSFHEG00000000655	NCBP1	99	81.887	ENSSSCG00000005366	NCBP1	99	82.390	Sus_scrofa
ENSFHEG00000000655	NCBP1	99	78.616	ENSTGUG00000001472	NCBP1	99	78.868	Taeniopygia_guttata
ENSFHEG00000000655	NCBP1	100	92.588	ENSTRUG00000005287	NCBP1	100	92.588	Takifugu_rubripes
ENSFHEG00000000655	NCBP1	99	79.497	ENSTBEG00000004035	NCBP1	99	80.000	Tupaia_belangeri
ENSFHEG00000000655	NCBP1	88	84.729	ENSTTRG00000000507	NCBP1	88	84.729	Tursiops_truncatus
ENSFHEG00000000655	NCBP1	99	82.013	ENSUAMG00000005471	NCBP1	99	82.516	Ursus_americanus
ENSFHEG00000000655	NCBP1	97	79.716	ENSUMAG00000011865	NCBP1	99	81.977	Ursus_maritimus
ENSFHEG00000000655	NCBP1	99	78.491	ENSVPAG00000010537	NCBP1	99	78.994	Vicugna_pacos
ENSFHEG00000000655	NCBP1	99	82.138	ENSVVUG00000019725	NCBP1	99	82.642	Vulpes_vulpes
ENSFHEG00000000655	NCBP1	99	79.397	ENSXETG00000010179	ncbp1	99	79.397	Xenopus_tropicalis
ENSFHEG00000000655	NCBP1	100	97.236	ENSXMAG00000018253	NCBP1	100	97.236	Xiphophorus_maculatus