EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSFHEG00000000708 (Gene tree)
Gene ID: 105933088
Gene Symbol: sbds
Alias: zgc:56700
Full Name: SBDS%2C ribosome maturation factor
Gene Type: protein_coding
Species: Fundulus_heteroclitus
Status: putative
Strand: Minus strand
Length: 5122 bases
Position: chrKN811400.1:775430-780551
Accession: 105933088
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSFHEP00000018962	SBDS	PF01172.18	1.9e-32	1	1
ENSFHEP00000033607	SBDS	PF01172.18	7.5e-18	1	1
ENSFHEP00000018962	SBDS_C	PF09377.10	2.5e-40	1	1
ENSFHEP00000033607	SBDS_C	PF09377.10	2.7e-40	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSFHET00000028089	-	2191	XM_012872467	ENSFHEP00000018962	249 (aa)	XP_012727921	UPI000644B6BA
ENSFHET00000028066	-	750	-	ENSFHEP00000033607	249 (aa)	-	-

Gene Model

Click here to download ENSFHEG00000000708's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSFHEG00000000708's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSFHEG00000000708	sbds	100	78.313	ENSG00000126524	SBDS	97	85.542	Homo_sapiens
ENSFHEG00000000708	sbds	100	91.566	ENSAPOG00000014285	sbds	100	91.566	Acanthochromis_polyacanthus
ENSFHEG00000000708	sbds	100	78.313	ENSAMEG00000018167	SBDS	99	78.313	Ailuropoda_melanoleuca
ENSFHEG00000000708	sbds	100	90.873	ENSACIG00000007308	sbds	100	90.873	Amphilophus_citrinellus
ENSFHEG00000000708	sbds	100	91.165	ENSAOCG00000016770	sbds	100	91.165	Amphiprion_ocellaris
ENSFHEG00000000708	sbds	100	91.566	ENSAPEG00000015897	sbds	100	91.566	Amphiprion_percula
ENSFHEG00000000708	sbds	99	91.903	ENSATEG00000006901	sbds	99	91.903	Anabas_testudineus
ENSFHEG00000000708	sbds	82	77.451	ENSANAG00000037501	-	99	76.699	Aotus_nancymaae
ENSFHEG00000000708	sbds	93	72.727	ENSANAG00000024342	-	95	75.904	Aotus_nancymaae
ENSFHEG00000000708	sbds	100	91.566	ENSACLG00000018750	sbds	100	91.566	Astatotilapia_calliptera
ENSFHEG00000000708	sbds	100	84.337	ENSAMXG00000005361	sbds	99	84.337	Astyanax_mexicanus
ENSFHEG00000000708	sbds	100	78.715	ENSBTAG00000004051	SBDS	99	78.715	Bos_taurus
ENSFHEG00000000708	sbds	98	56.504	WBGene00021063	sbds-1	97	56.504	Caenorhabditis_elegans
ENSFHEG00000000708	sbds	100	78.313	ENSCJAG00000041007	SBDS	99	78.313	Callithrix_jacchus
ENSFHEG00000000708	sbds	100	76.494	ENSCAFG00000010797	SBDS	99	76.494	Canis_familiaris
ENSFHEG00000000708	sbds	100	78.313	ENSCAFG00020005357	SBDS	99	78.313	Canis_lupus_dingo
ENSFHEG00000000708	sbds	100	78.715	ENSCHIG00000026854	SBDS	99	78.715	Capra_hircus
ENSFHEG00000000708	sbds	100	78.313	ENSTSYG00000033822	SBDS	99	78.313	Carlito_syrichta
ENSFHEG00000000708	sbds	65	76.687	ENSCAPG00000006634	SBDS	99	76.687	Cavia_aperea
ENSFHEG00000000708	sbds	100	79.518	ENSCPOG00000036143	SBDS	99	79.518	Cavia_porcellus
ENSFHEG00000000708	sbds	100	78.313	ENSCCAG00000020671	SBDS	93	85.542	Cebus_capucinus
ENSFHEG00000000708	sbds	100	78.313	ENSCATG00000039026	SBDS	99	78.313	Cercocebus_atys
ENSFHEG00000000708	sbds	100	79.920	ENSCLAG00000005721	-	99	79.920	Chinchilla_lanigera
ENSFHEG00000000708	sbds	98	56.911	ENSCLAG00000002113	-	99	56.911	Chinchilla_lanigera
ENSFHEG00000000708	sbds	100	78.313	ENSCSAG00000018275	SBDS	99	78.313	Chlorocebus_sabaeus
ENSFHEG00000000708	sbds	100	73.896	ENSCHOG00000003795	SBDS	99	73.896	Choloepus_hoffmanni
ENSFHEG00000000708	sbds	99	82.591	ENSCPBG00000014893	SBDS	99	81.928	Chrysemys_picta_bellii
ENSFHEG00000000708	sbds	100	67.200	ENSCSAVG00000011811	-	100	67.200	Ciona_savignyi
ENSFHEG00000000708	sbds	100	77.912	ENSCANG00000032368	SBDS	99	77.912	Colobus_angolensis_palliatus
ENSFHEG00000000708	sbds	65	76.687	ENSCGRG00001019886	Sbds	99	76.687	Cricetulus_griseus_chok1gshd
ENSFHEG00000000708	sbds	83	78.155	ENSCGRG00000009211	Sbds	99	78.155	Cricetulus_griseus_crigri
ENSFHEG00000000708	sbds	99	91.093	ENSCSEG00000005798	sbds	99	91.093	Cynoglossus_semilaevis
ENSFHEG00000000708	sbds	100	92.369	ENSCVAG00000001053	sbds	100	92.369	Cyprinodon_variegatus
ENSFHEG00000000708	sbds	100	83.534	ENSDARG00000027803	sbds	99	83.534	Danio_rerio
ENSFHEG00000000708	sbds	100	78.715	ENSDNOG00000041174	SBDS	99	78.715	Dasypus_novemcinctus
ENSFHEG00000000708	sbds	100	80.723	ENSDORG00000026218	Sbds	99	80.723	Dipodomys_ordii
ENSFHEG00000000708	sbds	91	61.404	FBgn0035714	CG8549	98	60.324	Drosophila_melanogaster
ENSFHEG00000000708	sbds	93	59.483	ENSEBUG00000015780	sbds	99	59.483	Eptatretus_burgeri
ENSFHEG00000000708	sbds	100	78.313	ENSEASG00005008821	SBDS	99	78.313	Equus_asinus_asinus
ENSFHEG00000000708	sbds	100	78.313	ENSECAG00000008202	SBDS	99	78.313	Equus_caballus
ENSFHEG00000000708	sbds	59	92.000	ENSEEUG00000004768	SBDS	65	92.000	Erinaceus_europaeus
ENSFHEG00000000708	sbds	100	86.345	ENSELUG00000008382	sbds	99	86.345	Esox_lucius
ENSFHEG00000000708	sbds	100	78.313	ENSFCAG00000022142	SBDS	99	78.313	Felis_catus
ENSFHEG00000000708	sbds	100	83.534	ENSFALG00000013808	SBDS	99	83.534	Ficedula_albicollis
ENSFHEG00000000708	sbds	100	79.518	ENSFDAG00000018947	-	99	79.518	Fukomys_damarensis
ENSFHEG00000000708	sbds	100	84.337	ENSGMOG00000018356	sbds	99	84.337	Gadus_morhua
ENSFHEG00000000708	sbds	100	81.526	ENSGALG00000027989	SBDS	99	81.526	Gallus_gallus
ENSFHEG00000000708	sbds	92	90.870	ENSGAFG00000014204	sbds	100	90.870	Gambusia_affinis
ENSFHEG00000000708	sbds	99	85.830	ENSGACG00000012697	sbds	100	85.141	Gasterosteus_aculeatus
ENSFHEG00000000708	sbds	85	83.412	ENSGAGG00000022402	SBDS	99	82.629	Gopherus_agassizii
ENSFHEG00000000708	sbds	96	61.765	ENSGGOG00000040023	-	91	61.765	Gorilla_gorilla
ENSFHEG00000000708	sbds	100	91.566	ENSHBUG00000002660	sbds	100	91.566	Haplochromis_burtoni
ENSFHEG00000000708	sbds	100	77.912	ENSHGLG00000009671	SBDS	99	77.912	Heterocephalus_glaber_female
ENSFHEG00000000708	sbds	100	77.912	ENSHGLG00100011332	SBDS	99	77.912	Heterocephalus_glaber_male
ENSFHEG00000000708	sbds	100	85.944	ENSHCOG00000018606	sbds	100	85.944	Hippocampus_comes
ENSFHEG00000000708	sbds	100	83.133	ENSIPUG00000006536	sbds	99	83.133	Ictalurus_punctatus
ENSFHEG00000000708	sbds	100	57.540	ENSJJAG00000003934	-	99	57.540	Jaculus_jaculus
ENSFHEG00000000708	sbds	100	77.108	ENSJJAG00000012033	-	99	77.108	Jaculus_jaculus
ENSFHEG00000000708	sbds	100	91.968	ENSKMAG00000018542	sbds	100	91.968	Kryptolebias_marmoratus
ENSFHEG00000000708	sbds	100	88.755	ENSLBEG00000016687	sbds	100	88.755	Labrus_bergylta
ENSFHEG00000000708	sbds	100	70.751	ENSLACG00000018916	SBDS	99	70.751	Latimeria_chalumnae
ENSFHEG00000000708	sbds	99	85.425	ENSLOCG00000004073	sbds	99	84.739	Lepisosteus_oculatus
ENSFHEG00000000708	sbds	100	78.715	ENSLAFG00000008763	SBDS	99	78.715	Loxodonta_africana
ENSFHEG00000000708	sbds	100	78.313	ENSMFAG00000032620	SBDS	99	78.313	Macaca_fascicularis
ENSFHEG00000000708	sbds	100	78.313	ENSMMUG00000045653	SBDS	99	78.313	Macaca_mulatta
ENSFHEG00000000708	sbds	100	78.313	ENSMNEG00000031523	SBDS	99	78.313	Macaca_nemestrina
ENSFHEG00000000708	sbds	99	62.948	ENSMLEG00000036826	SBDS	99	61.355	Mandrillus_leucophaeus
ENSFHEG00000000708	sbds	100	91.165	ENSMAMG00000016062	sbds	100	91.165	Mastacembelus_armatus
ENSFHEG00000000708	sbds	100	91.566	ENSMZEG00005024385	sbds	100	91.566	Maylandia_zebra
ENSFHEG00000000708	sbds	100	81.526	ENSMGAG00000002119	SBDS	99	81.526	Meleagris_gallopavo
ENSFHEG00000000708	sbds	100	63.855	ENSMAUG00000022214	-	100	63.855	Mesocricetus_auratus
ENSFHEG00000000708	sbds	100	78.715	ENSMICG00000014366	SBDS	99	78.715	Microcebus_murinus
ENSFHEG00000000708	sbds	100	79.116	ENSMOCG00000011739	Sbds	99	79.116	Microtus_ochrogaster
ENSFHEG00000000708	sbds	100	79.200	ENSMMOG00000005061	sbds	100	79.200	Mola_mola
ENSFHEG00000000708	sbds	100	79.920	ENSMODG00000006644	SBDS	99	79.920	Monodelphis_domestica
ENSFHEG00000000708	sbds	100	87.550	ENSMALG00000010219	sbds	100	87.550	Monopterus_albus
ENSFHEG00000000708	sbds	100	79.920	MGP_CAROLIEiJ_G0027800	Sbds	98	90.476	Mus_caroli
ENSFHEG00000000708	sbds	100	80.321	ENSMUSG00000025337	Sbds	98	90.476	Mus_musculus
ENSFHEG00000000708	sbds	100	79.920	MGP_PahariEiJ_G0024384	Sbds	98	90.476	Mus_pahari
ENSFHEG00000000708	sbds	100	80.321	MGP_SPRETEiJ_G0028798	Sbds	98	90.476	Mus_spretus
ENSFHEG00000000708	sbds	67	77.844	ENSMPUG00000016192	SBDS	96	77.844	Mustela_putorius_furo
ENSFHEG00000000708	sbds	72	74.302	ENSMLUG00000013575	SBDS	99	73.481	Myotis_lucifugus
ENSFHEG00000000708	sbds	100	79.920	ENSNGAG00000012093	Sbds	99	79.920	Nannospalax_galili
ENSFHEG00000000708	sbds	100	91.566	ENSNBRG00000017027	sbds	100	91.566	Neolamprologus_brichardi
ENSFHEG00000000708	sbds	100	78.313	ENSNLEG00000013288	SBDS	99	78.313	Nomascus_leucogenys
ENSFHEG00000000708	sbds	99	80.162	ENSOPRG00000008721	SBDS	99	79.518	Ochotona_princeps
ENSFHEG00000000708	sbds	100	71.486	ENSODEG00000019253	-	84	71.486	Octodon_degus
ENSFHEG00000000708	sbds	100	59.839	ENSODEG00000000137	-	84	62.651	Octodon_degus
ENSFHEG00000000708	sbds	100	61.847	ENSODEG00000001116	-	99	61.847	Octodon_degus
ENSFHEG00000000708	sbds	100	91.566	ENSONIG00000005874	sbds	100	91.566	Oreochromis_niloticus
ENSFHEG00000000708	sbds	83	77.670	ENSOANG00000007674	-	99	77.670	Ornithorhynchus_anatinus
ENSFHEG00000000708	sbds	100	80.321	ENSOCUG00000003170	SBDS	99	80.321	Oryctolagus_cuniculus
ENSFHEG00000000708	sbds	100	88.353	ENSORLG00000023489	sbds	100	88.353	Oryzias_latipes
ENSFHEG00000000708	sbds	100	87.952	ENSORLG00020019282	sbds	100	87.952	Oryzias_latipes_hni
ENSFHEG00000000708	sbds	100	87.952	ENSORLG00015008005	sbds	100	87.952	Oryzias_latipes_hsok
ENSFHEG00000000708	sbds	100	89.157	ENSOMEG00000022747	sbds	100	89.157	Oryzias_melastigma
ENSFHEG00000000708	sbds	100	67.470	ENSOGAG00000015036	-	99	67.470	Otolemur_garnettii
ENSFHEG00000000708	sbds	100	79.116	ENSOGAG00000009011	-	99	79.116	Otolemur_garnettii
ENSFHEG00000000708	sbds	100	78.715	ENSOARG00000010609	SBDS	99	78.715	Ovis_aries
ENSFHEG00000000708	sbds	99	78.138	ENSPPAG00000043889	-	99	77.510	Pan_paniscus
ENSFHEG00000000708	sbds	100	78.313	ENSPPRG00000002307	SBDS	99	78.313	Panthera_pardus
ENSFHEG00000000708	sbds	100	78.313	ENSPTIG00000021308	SBDS	99	78.313	Panthera_tigris_altaica
ENSFHEG00000000708	sbds	84	78.469	ENSPTRG00000048174	-	88	80.203	Pan_troglodytes
ENSFHEG00000000708	sbds	99	67.206	ENSPTRG00000047744	-	99	66.667	Pan_troglodytes
ENSFHEG00000000708	sbds	100	78.313	ENSPTRG00000019254	SBDS	99	78.313	Pan_troglodytes
ENSFHEG00000000708	sbds	99	67.206	ENSPTRG00000050835	-	99	66.667	Pan_troglodytes
ENSFHEG00000000708	sbds	100	78.313	ENSPANG00000004078	SBDS	99	78.313	Papio_anubis
ENSFHEG00000000708	sbds	100	85.944	ENSPKIG00000006489	sbds	99	85.944	Paramormyrops_kingsleyae
ENSFHEG00000000708	sbds	82	81.773	ENSPSIG00000014603	SBDS	99	81.463	Pelodiscus_sinensis
ENSFHEG00000000708	sbds	100	91.165	ENSPMGG00000004246	sbds	100	91.165	Periophthalmus_magnuspinnatus
ENSFHEG00000000708	sbds	100	79.920	ENSPEMG00000008728	Sbds	99	79.920	Peromyscus_maniculatus_bairdii
ENSFHEG00000000708	sbds	100	80.321	ENSPCIG00000029718	SBDS	99	80.321	Phascolarctos_cinereus
ENSFHEG00000000708	sbds	100	91.968	ENSPFOG00000015837	sbds	100	91.968	Poecilia_formosa
ENSFHEG00000000708	sbds	100	92.369	ENSPLAG00000003641	sbds	100	92.369	Poecilia_latipinna
ENSFHEG00000000708	sbds	100	91.968	ENSPMEG00000019483	sbds	100	91.968	Poecilia_mexicana
ENSFHEG00000000708	sbds	100	91.165	ENSPREG00000018758	sbds	100	91.165	Poecilia_reticulata
ENSFHEG00000000708	sbds	100	78.313	ENSPPYG00000017513	SBDS	99	78.313	Pongo_abelii
ENSFHEG00000000708	sbds	100	78.313	ENSPCOG00000021098	SBDS	99	78.313	Propithecus_coquereli
ENSFHEG00000000708	sbds	100	78.715	ENSPVAG00000009369	SBDS	99	78.715	Pteropus_vampyrus
ENSFHEG00000000708	sbds	100	91.165	ENSPNYG00000022403	sbds	100	91.165	Pundamilia_nyererei
ENSFHEG00000000708	sbds	100	86.345	ENSPNAG00000001120	sbds	99	86.345	Pygocentrus_nattereri
ENSFHEG00000000708	sbds	100	79.920	ENSRNOG00000000888	Sbds	99	79.920	Rattus_norvegicus
ENSFHEG00000000708	sbds	100	78.313	ENSRBIG00000035557	SBDS	99	78.313	Rhinopithecus_bieti
ENSFHEG00000000708	sbds	100	65.462	ENSRROG00000041986	-	99	65.462	Rhinopithecus_roxellana
ENSFHEG00000000708	sbds	100	78.313	ENSRROG00000040842	-	99	78.313	Rhinopithecus_roxellana
ENSFHEG00000000708	sbds	96	41.463	YLR022C	-	96	39.592	Saccharomyces_cerevisiae
ENSFHEG00000000708	sbds	93	76.190	ENSSBOG00000022460	SBDS	99	76.190	Saimiri_boliviensis_boliviensis
ENSFHEG00000000708	sbds	99	70.040	ENSSHAG00000010263	SBDS	99	69.478	Sarcophilus_harrisii
ENSFHEG00000000708	sbds	100	86.747	ENSSFOG00015001108	sbds	99	86.747	Scleropages_formosus
ENSFHEG00000000708	sbds	99	90.283	ENSSMAG00000020506	sbds	99	90.283	Scophthalmus_maximus
ENSFHEG00000000708	sbds	100	89.960	ENSSDUG00000001528	sbds	100	89.960	Seriola_dumerili
ENSFHEG00000000708	sbds	100	89.558	ENSSLDG00000003659	sbds	100	89.558	Seriola_lalandi_dorsalis
ENSFHEG00000000708	sbds	73	87.059	ENSSARG00000001899	-	72	87.059	Sorex_araneus
ENSFHEG00000000708	sbds	61	83.660	ENSSARG00000013132	-	100	83.660	Sorex_araneus
ENSFHEG00000000708	sbds	99	82.186	ENSSPUG00000002699	SBDS	99	81.526	Sphenodon_punctatus
ENSFHEG00000000708	sbds	100	91.968	ENSSPAG00000016419	sbds	100	84.800	Stegastes_partitus
ENSFHEG00000000708	sbds	100	78.715	ENSSSCG00000007732	SBDS	99	78.715	Sus_scrofa
ENSFHEG00000000708	sbds	65	81.595	ENSTGUG00000003426	SBDS	98	81.595	Taeniopygia_guttata
ENSFHEG00000000708	sbds	99	90.283	ENSTRUG00000021443	sbds	99	90.283	Takifugu_rubripes
ENSFHEG00000000708	sbds	100	89.960	ENSTNIG00000019000	sbds	100	89.960	Tetraodon_nigroviridis
ENSFHEG00000000708	sbds	84	67.788	ENSTBEG00000001178	SBDS	94	69.036	Tupaia_belangeri
ENSFHEG00000000708	sbds	100	61.446	ENSTTRG00000003921	SBDS	99	61.446	Tursiops_truncatus
ENSFHEG00000000708	sbds	100	78.313	ENSUAMG00000001326	SBDS	99	78.313	Ursus_americanus
ENSFHEG00000000708	sbds	100	78.313	ENSUMAG00000015353	SBDS	99	78.313	Ursus_maritimus
ENSFHEG00000000708	sbds	100	78.313	ENSVVUG00000016478	SBDS	99	78.313	Vulpes_vulpes
ENSFHEG00000000708	sbds	99	81.781	ENSXETG00000010093	sbds	99	81.124	Xenopus_tropicalis
ENSFHEG00000000708	sbds	100	81.526	ENSXCOG00000010639	sbds	100	80.723	Xiphophorus_couchianus
ENSFHEG00000000708	sbds	100	92.369	ENSXMAG00000006065	sbds	100	92.369	Xiphophorus_maculatus