EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSFHEG00000000767 (Gene tree)
Gene ID: -
Gene Symbol: si:dkey-16l2.16
Alias: -
Full Name: ras-related protein Rab-35
Gene Type: protein_coding
Species: Fundulus_heteroclitus
Status: putative
Strand: Plus strand
Length: 11680 bases
Position: chrKN811551.1:36868-48547
Accession: 105938887
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSFHEP00000014370	MMR_HSR1	PF01926.23	2.2e-07	1	1
ENSFHEP00000030561	MMR_HSR1	PF01926.23	2.8e-07	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSFHET00000022188	-	1439	XM_012880810	ENSFHEP00000030561	162 (aa)	XP_012736264	-
ENSFHET00000022173	-	468	-	ENSFHEP00000014370	155 (aa)	-	-

Gene Model

Click here to download ENSFHEG00000000767's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSFHEG00000000767's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSFHEG00000000767	si:dkey-16l2.16	63	30.928	ENSFHEG00000013677	arl5c	51	30.928
ENSFHEG00000000767	si:dkey-16l2.16	60	31.818	ENSFHEG00000000458	arfrp1	52	31.818
ENSFHEG00000000767	si:dkey-16l2.16	64	33.333	ENSFHEG00000009108	kras	52	33.333
ENSFHEG00000000767	si:dkey-16l2.16	72	43.243	ENSFHEG00000018056	rab38b	91	43.243
ENSFHEG00000000767	si:dkey-16l2.16	70	57.798	ENSFHEG00000021221	rab13	60	57.798
ENSFHEG00000000767	si:dkey-16l2.16	91	38.667	ENSFHEG00000018450	RAB14	76	38.667
ENSFHEG00000000767	si:dkey-16l2.16	76	35.593	ENSFHEG00000008212	rhebl1	62	35.593
ENSFHEG00000000767	si:dkey-16l2.16	66	71.845	ENSFHEG00000014414	-	51	71.845
ENSFHEG00000000767	si:dkey-16l2.16	67	37.500	ENSFHEG00000004875	si:ch73-116o1.2	50	37.500
ENSFHEG00000000767	si:dkey-16l2.16	94	34.641	ENSFHEG00000022524	rab6bb	74	34.641
ENSFHEG00000000767	si:dkey-16l2.16	75	69.492	ENSFHEG00000022176	zgc:171927	55	69.492
ENSFHEG00000000767	si:dkey-16l2.16	77	51.667	ENSFHEG00000009378	rab15	56	51.667
ENSFHEG00000000767	si:dkey-16l2.16	63	45.918	ENSFHEG00000012702	rab22a	51	45.918
ENSFHEG00000000767	si:dkey-16l2.16	69	53.271	ENSFHEG00000014087	RAB15	51	53.271
ENSFHEG00000000767	si:dkey-16l2.16	94	33.987	ENSFHEG00000015996	RAB41	73	33.987
ENSFHEG00000000767	si:dkey-16l2.16	66	40.777	ENSFHEG00000015993	RAB29	50	40.777
ENSFHEG00000000767	si:dkey-16l2.16	72	48.673	ENSFHEG00000014186	rab25a	54	48.673
ENSFHEG00000000767	si:dkey-16l2.16	70	51.852	ENSFHEG00000019668	rab11a	50	51.852
ENSFHEG00000000767	si:dkey-16l2.16	77	84.034	ENSFHEG00000004891	rab35b	64	85.345
ENSFHEG00000000767	si:dkey-16l2.16	75	43.089	ENSFHEG00000000695	-	57	43.089
ENSFHEG00000000767	si:dkey-16l2.16	84	57.664	ENSFHEG00000014924	rab1ba	68	57.664
ENSFHEG00000000767	si:dkey-16l2.16	70	50.926	ENSFHEG00000022642	rab11ba	52	50.000
ENSFHEG00000000767	si:dkey-16l2.16	84	59.854	ENSFHEG00000022985	rab1ab	67	59.854
ENSFHEG00000000767	si:dkey-16l2.16	70	52.778	ENSFHEG00000013918	rab30	53	52.778
ENSFHEG00000000767	si:dkey-16l2.16	69	51.402	ENSFHEG00000003018	rab25b	55	51.402
ENSFHEG00000000767	si:dkey-16l2.16	67	57.692	ENSFHEG00000019455	rab18a	51	57.692
ENSFHEG00000000767	si:dkey-16l2.16	70	50.926	ENSFHEG00000000832	rab11al	55	49.123
ENSFHEG00000000767	si:dkey-16l2.16	70	47.414	ENSFHEG00000001296	rab2a	55	47.414
ENSFHEG00000000767	si:dkey-16l2.16	70	50.926	ENSFHEG00000018353	rab11bb	50	50.926
ENSFHEG00000000767	si:dkey-16l2.16	65	32.000	ENSFHEG00000010692	arl3	52	32.323
ENSFHEG00000000767	si:dkey-16l2.16	99	34.146	ENSFHEG00000001477	-	68	35.811
ENSFHEG00000000767	si:dkey-16l2.16	67	36.538	ENSFHEG00000003799	rheb	56	36.538
ENSFHEG00000000767	si:dkey-16l2.16	63	33.673	ENSFHEG00000010055	hrasb	51	33.673
ENSFHEG00000000767	si:dkey-16l2.16	84	32.847	ENSFHEG00000023069	rab23	67	32.278
ENSFHEG00000000767	si:dkey-16l2.16	66	30.769	ENSFHEG00000009487	arl4aa	52	30.769
ENSFHEG00000000767	si:dkey-16l2.16	70	50.926	ENSFHEG00000022676	-	57	50.926

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSFHEG00000000767	si:dkey-16l2.16	78	93.388	ENSAPOG00000008263	si:dkey-16l2.16	58	93.388	Acanthochromis_polyacanthus
ENSFHEG00000000767	si:dkey-16l2.16	78	94.215	ENSAOCG00000016825	si:dkey-16l2.16	58	94.215	Amphiprion_ocellaris
ENSFHEG00000000767	si:dkey-16l2.16	78	94.215	ENSAPEG00000006500	si:dkey-16l2.16	58	94.215	Amphiprion_percula
ENSFHEG00000000767	si:dkey-16l2.16	78	94.215	ENSATEG00000019238	si:dkey-16l2.16	58	94.215	Anabas_testudineus
ENSFHEG00000000767	si:dkey-16l2.16	78	94.215	ENSACLG00000018721	si:dkey-16l2.16	58	94.215	Astatotilapia_calliptera
ENSFHEG00000000767	si:dkey-16l2.16	78	94.215	ENSAMXG00000038243	si:dkey-16l2.16	98	92.683	Astyanax_mexicanus
ENSFHEG00000000767	si:dkey-16l2.16	77	93.277	ENSCSEG00000009988	si:dkey-16l2.16	91	94.118	Cynoglossus_semilaevis
ENSFHEG00000000767	si:dkey-16l2.16	78	95.041	ENSCVAG00000003537	si:dkey-16l2.16	58	95.041	Cyprinodon_variegatus
ENSFHEG00000000767	si:dkey-16l2.16	78	92.562	ENSDARG00000037967	si:dkey-16l2.16	100	94.118	Danio_rerio
ENSFHEG00000000767	si:dkey-16l2.16	77	91.667	ENSELUG00000023247	si:dkey-16l2.16	56	93.162	Esox_lucius
ENSFHEG00000000767	si:dkey-16l2.16	76	93.277	ENSGMOG00000015174	si:dkey-16l2.16	73	93.277	Gadus_morhua
ENSFHEG00000000767	si:dkey-16l2.16	78	94.215	ENSGAFG00000005388	si:dkey-16l2.16	58	94.215	Gambusia_affinis
ENSFHEG00000000767	si:dkey-16l2.16	78	93.388	ENSGACG00000014915	si:dkey-16l2.16	57	93.388	Gasterosteus_aculeatus
ENSFHEG00000000767	si:dkey-16l2.16	78	94.215	ENSHBUG00000019261	si:dkey-16l2.16	58	94.215	Haplochromis_burtoni
ENSFHEG00000000767	si:dkey-16l2.16	78	93.388	ENSHCOG00000006538	si:dkey-16l2.16	58	93.388	Hippocampus_comes
ENSFHEG00000000767	si:dkey-16l2.16	77	90.756	ENSKMAG00000003494	si:dkey-16l2.16	57	91.597	Kryptolebias_marmoratus
ENSFHEG00000000767	si:dkey-16l2.16	78	94.215	ENSLBEG00000007681	si:dkey-16l2.16	58	94.215	Labrus_bergylta
ENSFHEG00000000767	si:dkey-16l2.16	78	94.215	ENSMAMG00000019230	si:dkey-16l2.16	58	94.215	Mastacembelus_armatus
ENSFHEG00000000767	si:dkey-16l2.16	78	94.215	ENSMZEG00005002081	si:dkey-16l2.16	58	94.215	Maylandia_zebra
ENSFHEG00000000767	si:dkey-16l2.16	76	94.068	ENSMMOG00000020140	si:dkey-16l2.16	54	95.652	Mola_mola
ENSFHEG00000000767	si:dkey-16l2.16	78	93.388	ENSMALG00000014727	si:dkey-16l2.16	56	94.915	Monopterus_albus
ENSFHEG00000000767	si:dkey-16l2.16	78	94.215	ENSNBRG00000008930	si:dkey-16l2.16	58	94.215	Neolamprologus_brichardi
ENSFHEG00000000767	si:dkey-16l2.16	78	94.215	ENSONIG00000009443	si:dkey-16l2.16	58	94.215	Oreochromis_niloticus
ENSFHEG00000000767	si:dkey-16l2.16	78	90.909	ENSORLG00000001098	si:dkey-16l2.16	58	90.909	Oryzias_latipes
ENSFHEG00000000767	si:dkey-16l2.16	78	90.909	ENSORLG00020000867	si:dkey-16l2.16	58	90.909	Oryzias_latipes_hni
ENSFHEG00000000767	si:dkey-16l2.16	78	91.736	ENSOMEG00000015474	si:dkey-16l2.16	57	93.220	Oryzias_melastigma
ENSFHEG00000000767	si:dkey-16l2.16	78	92.562	ENSPKIG00000005686	-	58	92.562	Paramormyrops_kingsleyae
ENSFHEG00000000767	si:dkey-16l2.16	78	91.736	ENSPKIG00000018888	si:dkey-16l2.16	58	91.736	Paramormyrops_kingsleyae
ENSFHEG00000000767	si:dkey-16l2.16	78	93.388	ENSPMGG00000000751	si:dkey-16l2.16	58	93.388	Periophthalmus_magnuspinnatus
ENSFHEG00000000767	si:dkey-16l2.16	78	94.215	ENSPFOG00000004746	si:dkey-16l2.16	58	94.215	Poecilia_formosa
ENSFHEG00000000767	si:dkey-16l2.16	78	94.215	ENSPLAG00000021043	si:dkey-16l2.16	58	94.215	Poecilia_latipinna
ENSFHEG00000000767	si:dkey-16l2.16	78	94.215	ENSPMEG00000007165	si:dkey-16l2.16	58	94.215	Poecilia_mexicana
ENSFHEG00000000767	si:dkey-16l2.16	78	94.215	ENSPREG00000005323	si:dkey-16l2.16	58	94.215	Poecilia_reticulata
ENSFHEG00000000767	si:dkey-16l2.16	78	94.215	ENSPNYG00000009490	si:dkey-16l2.16	58	94.215	Pundamilia_nyererei
ENSFHEG00000000767	si:dkey-16l2.16	78	93.388	ENSPNAG00000018986	si:dkey-16l2.16	58	93.388	Pygocentrus_nattereri
ENSFHEG00000000767	si:dkey-16l2.16	78	85.124	ENSSFOG00015006414	-	60	86.441	Scleropages_formosus
ENSFHEG00000000767	si:dkey-16l2.16	78	94.215	ENSSFOG00015021448	-	58	94.215	Scleropages_formosus
ENSFHEG00000000767	si:dkey-16l2.16	74	96.491	ENSSMAG00000011769	si:dkey-16l2.16	52	96.491	Scophthalmus_maximus
ENSFHEG00000000767	si:dkey-16l2.16	78	95.041	ENSSDUG00000005719	si:dkey-16l2.16	58	95.041	Seriola_dumerili
ENSFHEG00000000767	si:dkey-16l2.16	78	95.041	ENSSLDG00000003631	si:dkey-16l2.16	58	95.041	Seriola_lalandi_dorsalis
ENSFHEG00000000767	si:dkey-16l2.16	78	94.215	ENSSPAG00000006302	si:dkey-16l2.16	58	94.215	Stegastes_partitus
ENSFHEG00000000767	si:dkey-16l2.16	78	94.215	ENSTRUG00000025076	si:dkey-16l2.16	94	95.763	Takifugu_rubripes
ENSFHEG00000000767	si:dkey-16l2.16	78	94.215	ENSTNIG00000011300	si:dkey-16l2.16	58	94.215	Tetraodon_nigroviridis
ENSFHEG00000000767	si:dkey-16l2.16	78	94.215	ENSXMAG00000021767	si:dkey-16l2.16	58	94.215	Xiphophorus_maculatus