EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSFHEG00000001029 (Gene tree)
Gene ID: 105937449
Gene Symbol: yrdc
Alias: zgc:162301
Full Name: yrdC N6-threonylcarbamoyltransferase domain containing
Gene Type: protein_coding
Species: Fundulus_heteroclitus
Status: putative
Strand: Minus strand
Length: 15928 bases
Position: chrKN811509.1:190548-206475
Accession: 105937449
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSFHEP00000021353	Sua5_yciO_yrdC	PF01300.18	6.4e-50	1	1
ENSFHEP00000000315	Sua5_yciO_yrdC	PF01300.18	1.2e-49	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSFHET00000015724	-	1109	-	ENSFHEP00000021353	248 (aa)	-	-
ENSFHET00000015722	-	5493	XM_012878767	ENSFHEP00000000315	314 (aa)	XP_012734221	-

Gene Model

Click here to download ENSFHEG00000001029's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSFHEG00000001029's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSFHEG00000001029	yrdc	84	57.277	ENSG00000196449	YRDC	82	57.143	Homo_sapiens
ENSFHEG00000001029	yrdc	96	76.569	ENSAPOG00000024293	yrdc	98	76.245	Acanthochromis_polyacanthus
ENSFHEG00000001029	yrdc	66	63.095	ENSAMEG00000001173	YRDC	97	62.295	Ailuropoda_melanoleuca
ENSFHEG00000001029	yrdc	99	78.367	ENSACIG00000017330	yrdc	100	77.903	Amphilophus_citrinellus
ENSFHEG00000001029	yrdc	96	76.987	ENSAOCG00000021647	yrdc	98	76.628	Amphiprion_ocellaris
ENSFHEG00000001029	yrdc	96	76.569	ENSAPEG00000006164	yrdc	98	76.245	Amphiprion_percula
ENSFHEG00000001029	yrdc	96	75.630	ENSATEG00000010086	yrdc	95	75.591	Anabas_testudineus
ENSFHEG00000001029	yrdc	69	60.571	ENSACAG00000017203	YRDC	93	60.606	Anolis_carolinensis
ENSFHEG00000001029	yrdc	81	56.863	ENSANAG00000028788	-	93	56.621	Aotus_nancymaae
ENSFHEG00000001029	yrdc	85	52.752	ENSANAG00000031052	-	84	52.790	Aotus_nancymaae
ENSFHEG00000001029	yrdc	99	74.390	ENSACLG00000027775	yrdc	100	74.254	Astatotilapia_calliptera
ENSFHEG00000001029	yrdc	90	67.841	ENSAMXG00000037791	yrdc	93	67.699	Astyanax_mexicanus
ENSFHEG00000001029	yrdc	98	54.839	ENSBTAG00000006510	YRDC	96	53.731	Bos_taurus
ENSFHEG00000001029	yrdc	77	34.314	WBGene00012997	Y48C3A.18	98	35.294	Caenorhabditis_elegans
ENSFHEG00000001029	yrdc	96	53.469	ENSCJAG00000002078	YRDC	71	53.462	Callithrix_jacchus
ENSFHEG00000001029	yrdc	93	54.274	ENSCAFG00000003253	YRDC	96	52.768	Canis_familiaris
ENSFHEG00000001029	yrdc	93	54.701	ENSCAFG00020007843	YRDC	96	53.137	Canis_lupus_dingo
ENSFHEG00000001029	yrdc	98	53.629	ENSCHIG00000007882	YRDC	96	52.416	Capra_hircus
ENSFHEG00000001029	yrdc	61	63.871	ENSTSYG00000005555	YRDC	61	62.941	Carlito_syrichta
ENSFHEG00000001029	yrdc	85	60.185	ENSCPOG00000036144	YRDC	82	59.307	Cavia_porcellus
ENSFHEG00000001029	yrdc	96	53.469	ENSCCAG00000028891	YRDC	82	56.710	Cebus_capucinus
ENSFHEG00000001029	yrdc	84	54.930	ENSCATG00000036928	YRDC	82	56.277	Cercocebus_atys
ENSFHEG00000001029	yrdc	69	65.714	ENSCLAG00000015012	YRDC	95	54.307	Chinchilla_lanigera
ENSFHEG00000001029	yrdc	84	54.930	ENSCSAG00000001116	YRDC	82	56.277	Chlorocebus_sabaeus
ENSFHEG00000001029	yrdc	68	55.357	ENSCHOG00000005500	YRDC	79	55.357	Choloepus_hoffmanni
ENSFHEG00000001029	yrdc	81	60.000	ENSCPBG00000018446	YRDC	95	58.744	Chrysemys_picta_bellii
ENSFHEG00000001029	yrdc	75	47.179	ENSCING00000007564	-	98	47.887	Ciona_intestinalis
ENSFHEG00000001029	yrdc	75	47.179	ENSCSAVG00000009982	-	98	47.393	Ciona_savignyi
ENSFHEG00000001029	yrdc	84	55.869	ENSCANG00000031111	YRDC	82	57.143	Colobus_angolensis_palliatus
ENSFHEG00000001029	yrdc	96	49.187	ENSCGRG00001000829	-	72	49.621	Cricetulus_griseus_chok1gshd
ENSFHEG00000001029	yrdc	96	54.065	ENSCGRG00001014496	-	94	53.731	Cricetulus_griseus_chok1gshd
ENSFHEG00000001029	yrdc	92	67.782	ENSCSEG00000019075	yrdc	94	68.093	Cynoglossus_semilaevis
ENSFHEG00000001029	yrdc	99	84.898	ENSCVAG00000017355	yrdc	100	83.895	Cyprinodon_variegatus
ENSFHEG00000001029	yrdc	87	68.056	ENSDARG00000041428	yrdc	98	67.949	Danio_rerio
ENSFHEG00000001029	yrdc	84	55.399	ENSDNOG00000038789	-	95	51.837	Dasypus_novemcinctus
ENSFHEG00000001029	yrdc	69	45.198	ENSDNOG00000036198	-	93	44.624	Dasypus_novemcinctus
ENSFHEG00000001029	yrdc	70	63.842	ENSDORG00000008788	Yrdc	87	61.929	Dipodomys_ordii
ENSFHEG00000001029	yrdc	89	43.723	FBgn0061361	CG33786	98	43.373	Drosophila_melanogaster
ENSFHEG00000001029	yrdc	98	42.000	ENSETEG00000003442	YRDC	94	42.481	Echinops_telfairi
ENSFHEG00000001029	yrdc	86	49.309	ENSEBUG00000014080	yrdc	97	48.936	Eptatretus_burgeri
ENSFHEG00000001029	yrdc	96	54.839	ENSEASG00005012253	YRDC	95	53.903	Equus_asinus_asinus
ENSFHEG00000001029	yrdc	96	54.878	ENSECAG00000022522	YRDC	95	53.933	Equus_caballus
ENSFHEG00000001029	yrdc	93	67.234	ENSELUG00000018071	yrdc	89	65.185	Esox_lucius
ENSFHEG00000001029	yrdc	84	56.808	ENSFCAG00000011018	YRDC	95	52.809	Felis_catus
ENSFHEG00000001029	yrdc	74	31.122	ENSFALG00000011333	-	51	31.122	Ficedula_albicollis
ENSFHEG00000001029	yrdc	69	67.816	ENSFALG00000000964	YRDC	86	66.667	Ficedula_albicollis
ENSFHEG00000001029	yrdc	76	79.255	ENSGMOG00000015635	yrdc	99	77.561	Gadus_morhua
ENSFHEG00000001029	yrdc	80	61.881	ENSGALG00000029001	YRDC	80	63.235	Gallus_gallus
ENSFHEG00000001029	yrdc	74	31.122	ENSGALG00000025899	-	65	31.122	Gallus_gallus
ENSFHEG00000001029	yrdc	99	85.306	ENSGAFG00000008396	yrdc	100	85.019	Gambusia_affinis
ENSFHEG00000001029	yrdc	87	74.091	ENSGACG00000013878	yrdc	100	71.545	Gasterosteus_aculeatus
ENSFHEG00000001029	yrdc	80	62.376	ENSGAGG00000014968	YRDC	90	63.768	Gopherus_agassizii
ENSFHEG00000001029	yrdc	84	57.277	ENSGGOG00000007619	YRDC	82	57.143	Gorilla_gorilla
ENSFHEG00000001029	yrdc	99	74.797	ENSHBUG00000009298	yrdc	100	74.254	Haplochromis_burtoni
ENSFHEG00000001029	yrdc	96	55.285	ENSHGLG00000014075	YRDC	95	54.307	Heterocephalus_glaber_female
ENSFHEG00000001029	yrdc	74	62.567	ENSHGLG00100002734	YRDC	75	60.577	Heterocephalus_glaber_male
ENSFHEG00000001029	yrdc	98	62.705	ENSHCOG00000006598	yrdc	100	62.782	Hippocampus_comes
ENSFHEG00000001029	yrdc	88	69.124	ENSIPUG00000014985	yrdc	97	68.511	Ictalurus_punctatus
ENSFHEG00000001029	yrdc	96	54.472	ENSSTOG00000001643	YRDC	93	54.406	Ictidomys_tridecemlineatus
ENSFHEG00000001029	yrdc	95	78.298	ENSKMAG00000013468	yrdc	96	78.599	Kryptolebias_marmoratus
ENSFHEG00000001029	yrdc	96	75.732	ENSLBEG00000027501	yrdc	97	76.154	Labrus_bergylta
ENSFHEG00000001029	yrdc	74	33.333	ENSLACG00000017624	si:ch211-153b23.3	63	32.536	Latimeria_chalumnae
ENSFHEG00000001029	yrdc	98	55.642	ENSLACG00000010689	YRDC	96	63.942	Latimeria_chalumnae
ENSFHEG00000001029	yrdc	87	64.706	ENSLOCG00000003321	yrdc	97	63.983	Lepisosteus_oculatus
ENSFHEG00000001029	yrdc	94	54.661	ENSLAFG00000017556	YRDC	85	54.582	Loxodonta_africana
ENSFHEG00000001029	yrdc	75	58.730	ENSMFAG00000003487	YRDC	96	59.804	Macaca_fascicularis
ENSFHEG00000001029	yrdc	84	54.930	ENSMMUG00000005372	YRDC	61	56.277	Macaca_mulatta
ENSFHEG00000001029	yrdc	84	54.930	ENSMNEG00000029348	YRDC	82	56.277	Macaca_nemestrina
ENSFHEG00000001029	yrdc	50	63.281	ENSMLEG00000041122	YRDC	95	64.336	Mandrillus_leucophaeus
ENSFHEG00000001029	yrdc	96	76.349	ENSMAMG00000007315	yrdc	96	76.654	Mastacembelus_armatus
ENSFHEG00000001029	yrdc	99	74.390	ENSMZEG00005006948	yrdc	100	74.254	Maylandia_zebra
ENSFHEG00000001029	yrdc	74	31.633	ENSMGAG00000005489	-	51	31.633	Meleagris_gallopavo
ENSFHEG00000001029	yrdc	71	66.851	ENSMGAG00000002833	YRDC	96	65.816	Meleagris_gallopavo
ENSFHEG00000001029	yrdc	84	57.746	ENSMICG00000031688	YRDC	84	56.780	Microcebus_murinus
ENSFHEG00000001029	yrdc	79	50.000	ENSMOCG00000000164	-	76	50.000	Microtus_ochrogaster
ENSFHEG00000001029	yrdc	96	74.059	ENSMMOG00000002119	yrdc	98	73.946	Mola_mola
ENSFHEG00000001029	yrdc	75	62.105	ENSMODG00000017750	YRDC	73	60.976	Monodelphis_domestica
ENSFHEG00000001029	yrdc	96	73.640	ENSMALG00000012471	yrdc	96	74.409	Monopterus_albus
ENSFHEG00000001029	yrdc	96	54.694	MGP_CAROLIEiJ_G0026453	Yrdc	98	66.990	Mus_caroli
ENSFHEG00000001029	yrdc	96	54.217	ENSMUSG00000028889	Yrdc	100	67.619	Mus_musculus
ENSFHEG00000001029	yrdc	96	53.414	MGP_PahariEiJ_G0028784	Yrdc	100	66.667	Mus_pahari
ENSFHEG00000001029	yrdc	96	54.217	MGP_SPRETEiJ_G0027432	Yrdc	95	53.333	Mus_spretus
ENSFHEG00000001029	yrdc	74	60.963	ENSMPUG00000014542	YRDC	81	60.396	Mustela_putorius_furo
ENSFHEG00000001029	yrdc	96	53.846	ENSMLUG00000000955	-	93	54.580	Myotis_lucifugus
ENSFHEG00000001029	yrdc	98	44.980	ENSMLUG00000028796	-	94	44.906	Myotis_lucifugus
ENSFHEG00000001029	yrdc	72	58.470	ENSMLUG00000024310	-	97	59.091	Myotis_lucifugus
ENSFHEG00000001029	yrdc	75	61.579	ENSNGAG00000019099	Yrdc	75	59.716	Nannospalax_galili
ENSFHEG00000001029	yrdc	99	74.797	ENSNBRG00000009475	yrdc	100	74.812	Neolamprologus_brichardi
ENSFHEG00000001029	yrdc	84	57.277	ENSNLEG00000011665	YRDC	82	57.143	Nomascus_leucogenys
ENSFHEG00000001029	yrdc	75	62.105	ENSMEUG00000005068	YRDC	95	61.463	Notamacropus_eugenii
ENSFHEG00000001029	yrdc	84	57.746	ENSODEG00000007401	YRDC	100	66.667	Octodon_degus
ENSFHEG00000001029	yrdc	87	80.556	ENSONIG00000016213	yrdc	100	79.832	Oreochromis_niloticus
ENSFHEG00000001029	yrdc	84	58.216	ENSOCUG00000005384	YRDC	80	57.384	Oryctolagus_cuniculus
ENSFHEG00000001029	yrdc	96	72.727	ENSORLG00000014393	yrdc	98	73.485	Oryzias_latipes
ENSFHEG00000001029	yrdc	96	72.917	ENSORLG00020019663	yrdc	98	73.664	Oryzias_latipes_hni
ENSFHEG00000001029	yrdc	96	72.083	ENSORLG00015004625	yrdc	98	72.901	Oryzias_latipes_hsok
ENSFHEG00000001029	yrdc	96	73.222	ENSOMEG00000018550	yrdc	97	73.946	Oryzias_melastigma
ENSFHEG00000001029	yrdc	85	57.407	ENSOGAG00000030474	YRDC	83	56.710	Otolemur_garnettii
ENSFHEG00000001029	yrdc	93	55.128	ENSOARG00000019873	YRDC	84	55.696	Ovis_aries
ENSFHEG00000001029	yrdc	84	56.808	ENSPPRG00000007752	YRDC	95	52.809	Panthera_pardus
ENSFHEG00000001029	yrdc	84	46.429	ENSPTIG00000019821	YRDC	96	46.862	Panthera_tigris_altaica
ENSFHEG00000001029	yrdc	84	57.277	ENSPTRG00000000557	YRDC	82	57.143	Pan_troglodytes
ENSFHEG00000001029	yrdc	84	54.930	ENSPANG00000006487	YRDC	62	56.277	Papio_anubis
ENSFHEG00000001029	yrdc	99	64.113	ENSPKIG00000004574	yrdc	96	63.878	Paramormyrops_kingsleyae
ENSFHEG00000001029	yrdc	75	62.963	ENSPSIG00000006483	YRDC	73	61.353	Pelodiscus_sinensis
ENSFHEG00000001029	yrdc	94	70.815	ENSPMGG00000004184	yrdc	96	71.660	Periophthalmus_magnuspinnatus
ENSFHEG00000001029	yrdc	62	61.146	ENSPEMG00000016985	Yrdc	75	60.465	Peromyscus_maniculatus_bairdii
ENSFHEG00000001029	yrdc	69	59.429	ENSPMAG00000002905	yrdc	95	59.429	Petromyzon_marinus
ENSFHEG00000001029	yrdc	93	53.361	ENSPCIG00000025731	YRDC	91	53.360	Phascolarctos_cinereus
ENSFHEG00000001029	yrdc	99	85.306	ENSPFOG00000023097	yrdc	100	85.019	Poecilia_formosa
ENSFHEG00000001029	yrdc	99	84.898	ENSPLAG00000020882	yrdc	100	84.644	Poecilia_latipinna
ENSFHEG00000001029	yrdc	99	85.306	ENSPMEG00000013237	yrdc	99	85.932	Poecilia_mexicana
ENSFHEG00000001029	yrdc	99	86.531	ENSPREG00000005285	yrdc	100	86.142	Poecilia_reticulata
ENSFHEG00000001029	yrdc	75	61.053	ENSPPYG00000001523	-	84	60.488	Pongo_abelii
ENSFHEG00000001029	yrdc	85	56.481	ENSPCAG00000016850	YRDC	82	56.710	Procavia_capensis
ENSFHEG00000001029	yrdc	84	57.746	ENSPCOG00000013214	YRDC	84	56.780	Propithecus_coquereli
ENSFHEG00000001029	yrdc	96	52.846	ENSPVAG00000010147	YRDC	93	53.257	Pteropus_vampyrus
ENSFHEG00000001029	yrdc	99	75.203	ENSPNYG00000013956	yrdc	100	74.627	Pundamilia_nyererei
ENSFHEG00000001029	yrdc	98	66.393	ENSPNAG00000015625	yrdc	99	66.393	Pygocentrus_nattereri
ENSFHEG00000001029	yrdc	84	56.604	ENSRNOG00000025424	Yrdc	95	52.809	Rattus_norvegicus
ENSFHEG00000001029	yrdc	84	55.399	ENSRBIG00000032289	YRDC	82	56.710	Rhinopithecus_bieti
ENSFHEG00000001029	yrdc	92	50.633	ENSRROG00000039370	YRDC	77	56.195	Rhinopithecus_roxellana
ENSFHEG00000001029	yrdc	73	60.870	ENSSBOG00000018937	YRDC	85	60.302	Saimiri_boliviensis_boliviensis
ENSFHEG00000001029	yrdc	50	67.442	ENSSHAG00000013957	-	97	65.278	Sarcophilus_harrisii
ENSFHEG00000001029	yrdc	79	70.854	ENSSFOG00015006128	yrdc	93	69.585	Scleropages_formosus
ENSFHEG00000001029	yrdc	87	79.167	ENSSMAG00000005195	yrdc	96	77.866	Scophthalmus_maximus
ENSFHEG00000001029	yrdc	96	76.569	ENSSDUG00000009775	yrdc	97	76.834	Seriola_dumerili
ENSFHEG00000001029	yrdc	57	32.432	ENSSDUG00000006736	-	79	30.719	Seriola_dumerili
ENSFHEG00000001029	yrdc	96	76.987	ENSSLDG00000003196	yrdc	97	77.220	Seriola_lalandi_dorsalis
ENSFHEG00000001029	yrdc	54	30.496	ENSSLDG00000008694	-	66	30.496	Seriola_lalandi_dorsalis
ENSFHEG00000001029	yrdc	75	64.550	ENSSPUG00000003946	YRDC	79	63.902	Sphenodon_punctatus
ENSFHEG00000001029	yrdc	96	76.151	ENSSPAG00000012559	yrdc	98	76.245	Stegastes_partitus
ENSFHEG00000001029	yrdc	96	54.878	ENSSSCG00000040425	YRDC	92	54.789	Sus_scrofa
ENSFHEG00000001029	yrdc	50	70.079	ENSTGUG00000001507	YRDC	97	68.310	Taeniopygia_guttata
ENSFHEG00000001029	yrdc	93	68.220	ENSTRUG00000005923	yrdc	95	67.969	Takifugu_rubripes
ENSFHEG00000001029	yrdc	60	61.688	ENSTBEG00000008863	YRDC	98	61.688	Tupaia_belangeri
ENSFHEG00000001029	yrdc	71	63.889	ENSUAMG00000006150	YRDC	96	63.077	Ursus_americanus
ENSFHEG00000001029	yrdc	86	44.495	ENSVPAG00000006642	YRDC	97	44.589	Vicugna_pacos
ENSFHEG00000001029	yrdc	75	65.608	ENSXETG00000014420	yrdc	86	64.706	Xenopus_tropicalis
ENSFHEG00000001029	yrdc	87	85.648	ENSXCOG00000000829	yrdc	100	85.294	Xiphophorus_couchianus
ENSFHEG00000001029	yrdc	99	85.306	ENSXMAG00000014606	yrdc	99	83.094	Xiphophorus_maculatus