EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSFHEG00000001266 (Gene tree)
Gene ID: 105921953
Gene Symbol: rbm17
Alias: zgc:55840
Full Name: RNA binding motif protein 17
Gene Type: protein_coding
Species: Fundulus_heteroclitus
Status: putative
Strand: Plus strand
Length: 24982 bases
Position: chrKN806415.1:59608-84589
Accession: 105921953
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSFHEP00000000555	RRM_1	PF00076.22	3.6e-05	1	1
ENSFHEP00000000551	RRM_1	PF00076.22	4.3e-05	1	1
ENSFHEP00000021491	RRM_1	PF00076.22	4.8e-05	1	1
ENSFHEP00000000555	G-patch	PF01585.23	4.5e-13	1	1
ENSFHEP00000000551	G-patch	PF01585.23	5.2e-13	1	1
ENSFHEP00000021491	G-patch	PF01585.23	5.8e-13	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSFHET00000015339	-	3081	XM_021313724	ENSFHEP00000000551	428 (aa)	XP_021169399	A0A146XNS9
ENSFHET00000015343	-	1164	-	ENSFHEP00000000555	387 (aa)	-	-
ENSFHET00000015337	-	3423	-	ENSFHEP00000021491	462 (aa)	-	-

Gene Model

Click here to download ENSFHEG00000001266's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSFHEG00000001266's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSFHEG00000001266	rbm17	100	77.778	ENSG00000134453	RBM17	100	78.133	Homo_sapiens
ENSFHEG00000001266	rbm17	99	91.274	ENSAPOG00000007101	rbm17	99	92.806	Acanthochromis_polyacanthus
ENSFHEG00000001266	rbm17	100	78.025	ENSAMEG00000002107	RBM17	100	79.115	Ailuropoda_melanoleuca
ENSFHEG00000001266	rbm17	100	89.136	ENSACIG00000006251	rbm17	100	89.136	Amphilophus_citrinellus
ENSFHEG00000001266	rbm17	100	91.589	ENSAOCG00000014892	rbm17	100	93.112	Amphiprion_ocellaris
ENSFHEG00000001266	rbm17	100	91.589	ENSAPEG00000022779	rbm17	100	93.112	Amphiprion_percula
ENSFHEG00000001266	rbm17	100	89.720	ENSATEG00000004406	rbm17	100	91.211	Anabas_testudineus
ENSFHEG00000001266	rbm17	100	77.778	ENSAPLG00000004190	RBM17	100	78.870	Anas_platyrhynchos
ENSFHEG00000001266	rbm17	90	74.873	ENSACAG00000005418	RBM17	99	75.835	Anolis_carolinensis
ENSFHEG00000001266	rbm17	100	72.111	ENSANAG00000019330	-	95	86.207	Aotus_nancymaae
ENSFHEG00000001266	rbm17	100	78.554	ENSANAG00000030127	RBM17	97	88.333	Aotus_nancymaae
ENSFHEG00000001266	rbm17	100	90.680	ENSACLG00000003928	rbm17	100	90.680	Astatotilapia_calliptera
ENSFHEG00000001266	rbm17	100	82.791	ENSAMXG00000005853	rbm17	100	84.161	Astyanax_mexicanus
ENSFHEG00000001266	rbm17	100	76.296	ENSBTAG00000011094	-	100	77.396	Bos_taurus
ENSFHEG00000001266	rbm17	100	77.531	ENSBTAG00000021951	RBM17	100	77.887	Bos_taurus
ENSFHEG00000001266	rbm17	75	31.902	WBGene00010233	F58B3.7	97	31.204	Caenorhabditis_elegans
ENSFHEG00000001266	rbm17	100	81.061	ENSCJAG00000020573	RBM17	100	80.303	Callithrix_jacchus
ENSFHEG00000001266	rbm17	100	78.025	ENSCAFG00000005206	RBM17	100	79.115	Canis_familiaris
ENSFHEG00000001266	rbm17	100	80.357	ENSCAFG00020005420	RBM17	100	80.357	Canis_lupus_dingo
ENSFHEG00000001266	rbm17	100	76.413	ENSCHIG00000019921	-	100	75.676	Capra_hircus
ENSFHEG00000001266	rbm17	100	81.959	ENSCHIG00000023204	-	100	81.186	Capra_hircus
ENSFHEG00000001266	rbm17	100	77.156	ENSTSYG00000001165	RBM17	99	88.983	Carlito_syrichta
ENSFHEG00000001266	rbm17	90	69.714	ENSCAPG00000006275	RBM17	100	70.455	Cavia_aperea
ENSFHEG00000001266	rbm17	100	81.586	ENSCPOG00000005679	RBM17	99	80.818	Cavia_porcellus
ENSFHEG00000001266	rbm17	100	78.025	ENSCCAG00000018655	RBM17	97	88.333	Cebus_capucinus
ENSFHEG00000001266	rbm17	100	82.216	ENSCATG00000041566	RBM17	97	88.333	Cercocebus_atys
ENSFHEG00000001266	rbm17	100	77.622	ENSCLAG00000012195	RBM17	99	77.830	Chinchilla_lanigera
ENSFHEG00000001266	rbm17	100	77.778	ENSCSAG00000013564	RBM17	100	78.133	Chlorocebus_sabaeus
ENSFHEG00000001266	rbm17	93	61.055	ENSCHOG00000005131	RBM17	100	61.069	Choloepus_hoffmanni
ENSFHEG00000001266	rbm17	100	77.778	ENSCPBG00000019836	RBM17	100	78.302	Chrysemys_picta_bellii
ENSFHEG00000001266	rbm17	100	45.946	ENSCSAVG00000008782	-	100	44.419	Ciona_savignyi
ENSFHEG00000001266	rbm17	100	77.531	ENSCANG00000030987	RBM17	97	88.333	Colobus_angolensis_palliatus
ENSFHEG00000001266	rbm17	97	73.404	ENSCANG00000023715	-	99	72.751	Colobus_angolensis_palliatus
ENSFHEG00000001266	rbm17	100	77.855	ENSCGRG00001013842	Rbm17	100	78.066	Cricetulus_griseus_chok1gshd
ENSFHEG00000001266	rbm17	100	66.154	ENSCGRG00001009256	-	100	60.553	Cricetulus_griseus_chok1gshd
ENSFHEG00000001266	rbm17	100	77.855	ENSCGRG00000006907	Rbm17	100	78.066	Cricetulus_griseus_crigri
ENSFHEG00000001266	rbm17	100	85.926	ENSCSEG00000018164	rbm17	100	86.730	Cynoglossus_semilaevis
ENSFHEG00000001266	rbm17	100	90.840	ENSCVAG00000002476	rbm17	100	91.349	Cyprinodon_variegatus
ENSFHEG00000001266	rbm17	100	76.674	ENSDARG00000031346	rbm17	100	80.751	Danio_rerio
ENSFHEG00000001266	rbm17	100	77.778	ENSDNOG00000035920	RBM17	100	78.133	Dasypus_novemcinctus
ENSFHEG00000001266	rbm17	99	38.194	FBgn0086683	Spf45	61	50.661	Drosophila_melanogaster
ENSFHEG00000001266	rbm17	100	65.174	ENSETEG00000006642	RBM17	85	84.112	Echinops_telfairi
ENSFHEG00000001266	rbm17	64	69.048	ENSEBUG00000010253	rbm17	84	69.048	Eptatretus_burgeri
ENSFHEG00000001266	rbm17	92	76.596	ENSEASG00005009236	-	100	76.596	Equus_asinus_asinus
ENSFHEG00000001266	rbm17	100	81.633	ENSEASG00005019205	-	100	80.867	Equus_asinus_asinus
ENSFHEG00000001266	rbm17	100	72.423	ENSECAG00000008939	RBM17	100	73.196	Equus_caballus
ENSFHEG00000001266	rbm17	100	69.779	ENSECAG00000001379	-	100	69.779	Equus_caballus
ENSFHEG00000001266	rbm17	86	60.215	ENSEEUG00000013077	RBM17	100	60.218	Erinaceus_europaeus
ENSFHEG00000001266	rbm17	100	82.838	ENSELUG00000006440	rbm17	100	84.186	Esox_lucius
ENSFHEG00000001266	rbm17	100	78.025	ENSFCAG00000031988	RBM17	100	79.115	Felis_catus
ENSFHEG00000001266	rbm17	100	76.790	ENSFALG00000001790	RBM17	100	77.887	Ficedula_albicollis
ENSFHEG00000001266	rbm17	100	77.622	ENSFDAG00000007470	RBM17	100	78.293	Fukomys_damarensis
ENSFHEG00000001266	rbm17	99	78.923	ENSGMOG00000008438	rbm17	100	79.048	Gadus_morhua
ENSFHEG00000001266	rbm17	100	78.025	ENSGALG00000006332	RBM17	100	79.115	Gallus_gallus
ENSFHEG00000001266	rbm17	100	93.909	ENSGAFG00000019879	rbm17	100	93.909	Gambusia_affinis
ENSFHEG00000001266	rbm17	99	86.318	ENSGACG00000019174	rbm17	99	87.648	Gasterosteus_aculeatus
ENSFHEG00000001266	rbm17	100	77.778	ENSGAGG00000019906	RBM17	100	78.302	Gopherus_agassizii
ENSFHEG00000001266	rbm17	100	90.680	ENSHBUG00000016624	rbm17	100	92.162	Haplochromis_burtoni
ENSFHEG00000001266	rbm17	100	77.622	ENSHGLG00000011580	RBM17	100	78.293	Heterocephalus_glaber_female
ENSFHEG00000001266	rbm17	100	67.092	ENSHGLG00100010556	-	100	63.776	Heterocephalus_glaber_male
ENSFHEG00000001266	rbm17	100	77.622	ENSHGLG00100010460	RBM17	100	78.293	Heterocephalus_glaber_male
ENSFHEG00000001266	rbm17	99	85.446	ENSHCOG00000010865	rbm17	100	86.874	Hippocampus_comes
ENSFHEG00000001266	rbm17	100	80.093	ENSIPUG00000007699	Rbm17	100	81.500	Ictalurus_punctatus
ENSFHEG00000001266	rbm17	100	77.855	ENSSTOG00000013591	RBM17	100	78.537	Ictidomys_tridecemlineatus
ENSFHEG00000001266	rbm17	100	57.248	ENSJJAG00000000993	-	100	57.075	Jaculus_jaculus
ENSFHEG00000001266	rbm17	100	77.855	ENSJJAG00000022886	Rbm17	100	78.066	Jaculus_jaculus
ENSFHEG00000001266	rbm17	100	91.184	ENSKMAG00000021400	rbm17	100	92.399	Kryptolebias_marmoratus
ENSFHEG00000001266	rbm17	100	88.785	ENSLBEG00000000881	rbm17	100	90.261	Labrus_bergylta
ENSFHEG00000001266	rbm17	99	63.741	ENSLACG00000017297	RBM17	99	64.434	Latimeria_chalumnae
ENSFHEG00000001266	rbm17	100	79.412	ENSLOCG00000015659	rbm17	100	78.431	Lepisosteus_oculatus
ENSFHEG00000001266	rbm17	100	77.622	ENSLAFG00000011629	RBM17	100	77.913	Loxodonta_africana
ENSFHEG00000001266	rbm17	100	82.216	ENSMFAG00000035521	RBM17	97	88.333	Macaca_fascicularis
ENSFHEG00000001266	rbm17	100	77.778	ENSMMUG00000015152	RBM17	97	88.333	Macaca_mulatta
ENSFHEG00000001266	rbm17	100	82.216	ENSMNEG00000017264	RBM17	97	88.333	Macaca_nemestrina
ENSFHEG00000001266	rbm17	100	82.216	ENSMLEG00000029340	RBM17	97	88.333	Mandrillus_leucophaeus
ENSFHEG00000001266	rbm17	100	90.421	ENSMAMG00000000387	rbm17	100	91.924	Mastacembelus_armatus
ENSFHEG00000001266	rbm17	100	90.680	ENSMZEG00005015179	rbm17	100	92.162	Maylandia_zebra
ENSFHEG00000001266	rbm17	100	77.262	ENSMGAG00000003981	RBM17	100	78.169	Meleagris_gallopavo
ENSFHEG00000001266	rbm17	100	77.855	ENSMAUG00000019247	Rbm17	100	78.066	Mesocricetus_auratus
ENSFHEG00000001266	rbm17	100	78.554	ENSMICG00000003976	-	100	78.908	Microcebus_murinus
ENSFHEG00000001266	rbm17	100	72.791	ENSMICG00000041489	-	100	73.647	Microcebus_murinus
ENSFHEG00000001266	rbm17	100	77.855	ENSMOCG00000011847	Rbm17	100	78.066	Microtus_ochrogaster
ENSFHEG00000001266	rbm17	92	64.611	ENSMOCG00000014517	-	99	64.611	Microtus_ochrogaster
ENSFHEG00000001266	rbm17	100	82.641	ENSMMOG00000010264	rbm17	100	82.641	Mola_mola
ENSFHEG00000001266	rbm17	100	77.531	ENSMODG00000016648	RBM17	100	78.624	Monodelphis_domestica
ENSFHEG00000001266	rbm17	100	88.660	ENSMALG00000010597	rbm17	100	90.995	Monopterus_albus
ENSFHEG00000001266	rbm17	100	77.855	MGP_CAROLIEiJ_G0023173	Rbm17	100	78.774	Mus_caroli
ENSFHEG00000001266	rbm17	100	77.855	ENSMUSG00000037197	Rbm17	100	78.774	Mus_musculus
ENSFHEG00000001266	rbm17	100	77.855	MGP_PahariEiJ_G0019233	Rbm17	100	78.537	Mus_pahari
ENSFHEG00000001266	rbm17	100	77.855	MGP_SPRETEiJ_G0024091	Rbm17	100	78.774	Mus_spretus
ENSFHEG00000001266	rbm17	87	75.000	ENSMPUG00000016359	RBM17	96	76.571	Mustela_putorius_furo
ENSFHEG00000001266	rbm17	100	74.939	ENSMLUG00000025709	-	100	73.956	Myotis_lucifugus
ENSFHEG00000001266	rbm17	100	76.047	ENSMLUG00000002302	-	100	76.235	Myotis_lucifugus
ENSFHEG00000001266	rbm17	100	77.855	ENSNGAG00000000741	Rbm17	100	78.066	Nannospalax_galili
ENSFHEG00000001266	rbm17	100	59.794	ENSNGAG00000000663	-	100	58.763	Nannospalax_galili
ENSFHEG00000001266	rbm17	100	90.956	ENSNBRG00000018148	rbm17	100	90.956	Neolamprologus_brichardi
ENSFHEG00000001266	rbm17	100	78.500	ENSNLEG00000033350	RBM17	97	88.333	Nomascus_leucogenys
ENSFHEG00000001266	rbm17	100	72.099	ENSMEUG00000011347	RBM17	100	72.482	Notamacropus_eugenii
ENSFHEG00000001266	rbm17	100	67.980	ENSOPRG00000002993	RBM17	100	67.980	Ochotona_princeps
ENSFHEG00000001266	rbm17	97	61.757	ENSODEG00000007286	-	99	59.640	Octodon_degus
ENSFHEG00000001266	rbm17	100	77.442	ENSODEG00000004393	RBM17	100	78.353	Octodon_degus
ENSFHEG00000001266	rbm17	100	89.163	ENSONIG00000011838	rbm17	100	89.549	Oreochromis_niloticus
ENSFHEG00000001266	rbm17	100	77.094	ENSOANG00000015455	RBM17	100	78.431	Ornithorhynchus_anatinus
ENSFHEG00000001266	rbm17	100	89.486	ENSORLG00000028798	rbm17	100	90.974	Oryzias_latipes
ENSFHEG00000001266	rbm17	100	92.248	ENSORLG00020004593	rbm17	100	92.248	Oryzias_latipes_hni
ENSFHEG00000001266	rbm17	100	89.720	ENSORLG00015000033	rbm17	99	90.610	Oryzias_latipes_hsok
ENSFHEG00000001266	rbm17	100	89.486	ENSOMEG00000012060	rbm17	100	93.125	Oryzias_melastigma
ENSFHEG00000001266	rbm17	100	77.855	ENSOGAG00000015687	RBM17	100	78.780	Otolemur_garnettii
ENSFHEG00000001266	rbm17	100	77.531	ENSOARG00000012975	RBM17	100	77.887	Ovis_aries
ENSFHEG00000001266	rbm17	100	77.970	ENSPPAG00000032347	RBM17	97	88.333	Pan_paniscus
ENSFHEG00000001266	rbm17	100	78.025	ENSPPRG00000010706	RBM17	100	79.115	Panthera_pardus
ENSFHEG00000001266	rbm17	100	78.025	ENSPTIG00000007596	RBM17	100	79.115	Panthera_tigris_altaica
ENSFHEG00000001266	rbm17	100	77.970	ENSPTRG00000002265	RBM17	97	88.333	Pan_troglodytes
ENSFHEG00000001266	rbm17	100	82.216	ENSPANG00000023425	RBM17	97	88.333	Papio_anubis
ENSFHEG00000001266	rbm17	100	77.551	ENSPKIG00000005048	-	100	78.880	Paramormyrops_kingsleyae
ENSFHEG00000001266	rbm17	100	78.886	ENSPKIG00000025526	rbm17	100	77.986	Paramormyrops_kingsleyae
ENSFHEG00000001266	rbm17	100	76.716	ENSPSIG00000012332	RBM17	100	77.805	Pelodiscus_sinensis
ENSFHEG00000001266	rbm17	100	86.250	ENSPMGG00000007980	rbm17	100	86.250	Periophthalmus_magnuspinnatus
ENSFHEG00000001266	rbm17	100	77.855	ENSPEMG00000014320	Rbm17	100	78.066	Peromyscus_maniculatus_bairdii
ENSFHEG00000001266	rbm17	100	77.150	ENSPCIG00000019260	-	100	78.240	Phascolarctos_cinereus
ENSFHEG00000001266	rbm17	100	93.692	ENSPFOG00000013271	rbm17	100	95.249	Poecilia_formosa
ENSFHEG00000001266	rbm17	100	93.224	ENSPLAG00000004455	rbm17	100	94.774	Poecilia_latipinna
ENSFHEG00000001266	rbm17	100	93.692	ENSPMEG00000014864	rbm17	100	95.249	Poecilia_mexicana
ENSFHEG00000001266	rbm17	100	93.893	ENSPREG00000015589	rbm17	100	94.774	Poecilia_reticulata
ENSFHEG00000001266	rbm17	80	57.453	ENSPPYG00000019042	-	100	55.072	Pongo_abelii
ENSFHEG00000001266	rbm17	99	60.150	ENSPPYG00000019881	-	100	58.294	Pongo_abelii
ENSFHEG00000001266	rbm17	100	77.778	ENSPPYG00000002067	RBM17	100	78.133	Pongo_abelii
ENSFHEG00000001266	rbm17	100	70.396	ENSPCAG00000016879	RBM17	100	70.762	Procavia_capensis
ENSFHEG00000001266	rbm17	100	80.856	ENSPCOG00000027881	RBM17	100	80.101	Propithecus_coquereli
ENSFHEG00000001266	rbm17	100	70.647	ENSPVAG00000015499	RBM17	100	69.900	Pteropus_vampyrus
ENSFHEG00000001266	rbm17	100	84.755	ENSPNYG00000015274	rbm17	100	85.530	Pundamilia_nyererei
ENSFHEG00000001266	rbm17	100	83.488	ENSPNAG00000030046	rbm17	100	84.925	Pygocentrus_nattereri
ENSFHEG00000001266	rbm17	100	77.855	ENSRNOG00000018767	Rbm17	100	78.066	Rattus_norvegicus
ENSFHEG00000001266	rbm17	100	78.500	ENSRBIG00000043727	RBM17	97	88.333	Rhinopithecus_bieti
ENSFHEG00000001266	rbm17	100	82.216	ENSRROG00000044142	RBM17	97	88.333	Rhinopithecus_roxellana
ENSFHEG00000001266	rbm17	100	68.642	ENSSBOG00000023653	-	100	65.501	Saimiri_boliviensis_boliviensis
ENSFHEG00000001266	rbm17	100	80.808	ENSSBOG00000031661	-	93	89.565	Saimiri_boliviensis_boliviensis
ENSFHEG00000001266	rbm17	100	77.855	ENSSHAG00000012480	-	100	78.774	Sarcophilus_harrisii
ENSFHEG00000001266	rbm17	100	78.729	ENSSFOG00015009892	rbm17	100	79.108	Scleropages_formosus
ENSFHEG00000001266	rbm17	100	87.661	ENSSMAG00000012368	rbm17	100	87.404	Scophthalmus_maximus
ENSFHEG00000001266	rbm17	100	91.990	ENSSDUG00000015015	rbm17	100	91.990	Seriola_dumerili
ENSFHEG00000001266	rbm17	100	91.990	ENSSLDG00000014486	rbm17	100	91.990	Seriola_lalandi_dorsalis
ENSFHEG00000001266	rbm17	99	77.475	ENSSPUG00000001036	RBM17	99	77.833	Sphenodon_punctatus
ENSFHEG00000001266	rbm17	100	91.822	ENSSPAG00000002338	rbm17	100	93.349	Stegastes_partitus
ENSFHEG00000001266	rbm17	100	77.531	ENSSSCG00000011134	RBM17	100	77.887	Sus_scrofa
ENSFHEG00000001266	rbm17	100	76.923	ENSTGUG00000002013	RBM17	100	77.830	Taeniopygia_guttata
ENSFHEG00000001266	rbm17	100	87.850	ENSTRUG00000010698	rbm17	100	89.311	Takifugu_rubripes
ENSFHEG00000001266	rbm17	100	87.150	ENSTNIG00000006892	rbm17	100	88.599	Tetraodon_nigroviridis
ENSFHEG00000001266	rbm17	100	61.975	ENSTBEG00000014686	RBM17	100	63.457	Tupaia_belangeri
ENSFHEG00000001266	rbm17	90	75.773	ENSTTRG00000001344	RBM17	100	77.322	Tursiops_truncatus
ENSFHEG00000001266	rbm17	100	79.293	ENSUAMG00000009499	RBM17	100	79.545	Ursus_americanus
ENSFHEG00000001266	rbm17	100	82.474	ENSUMAG00000012237	RBM17	100	81.701	Ursus_maritimus
ENSFHEG00000001266	rbm17	100	68.657	ENSVPAG00000005497	RBM17	100	67.453	Vicugna_pacos
ENSFHEG00000001266	rbm17	100	80.357	ENSVVUG00000006780	RBM17	100	80.357	Vulpes_vulpes
ENSFHEG00000001266	rbm17	99	74.257	ENSXETG00000018123	rbm17	100	74.010	Xenopus_tropicalis
ENSFHEG00000001266	rbm17	100	93.458	ENSXMAG00000008674	rbm17	100	95.012	Xiphophorus_maculatus