EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSFHEG00000001286 (Gene tree)
Gene ID: -
Gene Symbol: ythdc1
Alias: zgc:101592
Full Name: YTH domain containing 1
Gene Type: protein_coding
Species: Fundulus_heteroclitus
Status: putative
Strand: Plus strand
Length: 12933 bases
Position: chrKN806414.1:70826-83758
Accession: 105921952
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSFHEP00000021500	YTH	PF04146.15	3.6e-19	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSFHET00000015302	-	1773	XM_021313716	ENSFHEP00000021500	590 (aa)	XP_021169391	-

Gene Model

Click here to download ENSFHEG00000001286's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSFHEG00000001286's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSFHEG00000001286	ythdc1	60	56.325	ENSG00000083896	YTHDC1	66	58.730	Homo_sapiens
ENSFHEG00000001286	ythdc1	55	66.138	ENSAPOG00000013997	ythdc1	94	63.666	Acanthochromis_polyacanthus
ENSFHEG00000001286	ythdc1	60	55.422	ENSAMEG00000005688	YTHDC1	65	58.730	Ailuropoda_melanoleuca
ENSFHEG00000001286	ythdc1	91	62.134	ENSACIG00000019728	ythdc1	94	62.081	Amphilophus_citrinellus
ENSFHEG00000001286	ythdc1	60	56.024	ENSAPLG00000009921	YTHDC1	68	64.151	Anas_platyrhynchos
ENSFHEG00000001286	ythdc1	62	53.274	ENSACAG00000009697	YTHDC1	68	52.381	Anolis_carolinensis
ENSFHEG00000001286	ythdc1	60	56.325	ENSANAG00000001522	YTHDC1	65	66.667	Aotus_nancymaae
ENSFHEG00000001286	ythdc1	60	54.819	ENSBTAG00000015572	YTHDC1	65	58.730	Bos_taurus
ENSFHEG00000001286	ythdc1	60	56.325	ENSCJAG00000009934	YTHDC1	65	58.730	Callithrix_jacchus
ENSFHEG00000001286	ythdc1	60	55.422	ENSCAFG00000002821	YTHDC1	65	58.730	Canis_familiaris
ENSFHEG00000001286	ythdc1	60	55.422	ENSCAFG00020027112	YTHDC1	65	58.730	Canis_lupus_dingo
ENSFHEG00000001286	ythdc1	60	56.325	ENSTSYG00000011668	YTHDC1	65	58.730	Carlito_syrichta
ENSFHEG00000001286	ythdc1	56	56.393	ENSCPOG00000010929	YTHDC1	54	58.730	Cavia_porcellus
ENSFHEG00000001286	ythdc1	60	56.325	ENSCCAG00000035754	YTHDC1	65	66.667	Cebus_capucinus
ENSFHEG00000001286	ythdc1	60	55.449	ENSCATG00000036320	YTHDC1	64	67.925	Cercocebus_atys
ENSFHEG00000001286	ythdc1	63	53.501	ENSCLAG00000005482	YTHDC1	65	67.925	Chinchilla_lanigera
ENSFHEG00000001286	ythdc1	60	56.325	ENSCSAG00000005252	YTHDC1	65	58.730	Chlorocebus_sabaeus
ENSFHEG00000001286	ythdc1	62	55.060	ENSCPBG00000021965	YTHDC1	55	61.290	Chrysemys_picta_bellii
ENSFHEG00000001286	ythdc1	60	56.325	ENSCANG00000004769	YTHDC1	65	66.667	Colobus_angolensis_palliatus
ENSFHEG00000001286	ythdc1	60	55.000	ENSCGRG00001000816	Ythdc1	66	60.317	Cricetulus_griseus_chok1gshd
ENSFHEG00000001286	ythdc1	60	56.024	ENSCGRG00000009807	Ythdc1	65	66.071	Cricetulus_griseus_crigri
ENSFHEG00000001286	ythdc1	69	73.077	ENSCSEG00000020404	ythdc1	78	61.985	Cynoglossus_semilaevis
ENSFHEG00000001286	ythdc1	66	80.620	ENSCVAG00000022349	ythdc1	78	67.669	Cyprinodon_variegatus
ENSFHEG00000001286	ythdc1	74	53.367	ENSDARG00000051953	ythdc1	72	55.102	Danio_rerio
ENSFHEG00000001286	ythdc1	75	50.000	ENSDNOG00000004949	YTHDC1	66	58.730	Dasypus_novemcinctus
ENSFHEG00000001286	ythdc1	60	56.325	ENSDORG00000013045	Ythdc1	65	66.038	Dipodomys_ordii
ENSFHEG00000001286	ythdc1	60	55.422	ENSEASG00005018383	YTHDC1	65	58.730	Equus_asinus_asinus
ENSFHEG00000001286	ythdc1	58	58.621	ENSECAG00000018303	YTHDC1	64	67.857	Equus_caballus
ENSFHEG00000001286	ythdc1	60	54.655	ENSEEUG00000015466	YTHDC1	65	58.730	Erinaceus_europaeus
ENSFHEG00000001286	ythdc1	55	52.311	ENSELUG00000014029	ythdc1	57	52.439	Esox_lucius
ENSFHEG00000001286	ythdc1	60	55.422	ENSFCAG00000026791	YTHDC1	63	67.857	Felis_catus
ENSFHEG00000001286	ythdc1	59	58.000	ENSFALG00000006581	YTHDC1	79	58.000	Ficedula_albicollis
ENSFHEG00000001286	ythdc1	60	56.024	ENSFDAG00000018560	YTHDC1	65	67.925	Fukomys_damarensis
ENSFHEG00000001286	ythdc1	57	77.358	ENSGMOG00000018815	ythdc1	67	77.358	Gadus_morhua
ENSFHEG00000001286	ythdc1	62	55.357	ENSGALG00000035906	YTHDC1	63	55.932	Gallus_gallus
ENSFHEG00000001286	ythdc1	73	62.979	ENSGAFG00000001759	ythdc1	95	66.452	Gambusia_affinis
ENSFHEG00000001286	ythdc1	77	70.149	ENSGACG00000015486	ythdc1	79	70.149	Gasterosteus_aculeatus
ENSFHEG00000001286	ythdc1	61	54.070	ENSGAGG00000007108	YTHDC1	57	63.636	Gopherus_agassizii
ENSFHEG00000001286	ythdc1	60	55.449	ENSGGOG00000021958	YTHDC1	65	66.667	Gorilla_gorilla
ENSFHEG00000001286	ythdc1	60	55.000	ENSHGLG00000006319	-	66	58.730	Heterocephalus_glaber_female
ENSFHEG00000001286	ythdc1	60	54.464	ENSHGLG00100001556	-	65	67.925	Heterocephalus_glaber_male
ENSFHEG00000001286	ythdc1	57	75.806	ENSHCOG00000001520	ythdc1	63	68.981	Hippocampus_comes
ENSFHEG00000001286	ythdc1	60	55.294	ENSSTOG00000013652	YTHDC1	66	58.730	Ictidomys_tridecemlineatus
ENSFHEG00000001286	ythdc1	60	55.128	ENSJJAG00000010268	Ythdc1	65	66.038	Jaculus_jaculus
ENSFHEG00000001286	ythdc1	50	91.429	ENSLBEG00000020831	ythdc1	74	94.118	Labrus_bergylta
ENSFHEG00000001286	ythdc1	81	48.221	ENSLOCG00000003045	ythdc1	66	54.885	Lepisosteus_oculatus
ENSFHEG00000001286	ythdc1	81	45.907	ENSLAFG00000021592	YTHDC1	71	67.925	Loxodonta_africana
ENSFHEG00000001286	ythdc1	60	55.449	ENSMFAG00000031927	YTHDC1	65	66.667	Macaca_fascicularis
ENSFHEG00000001286	ythdc1	60	56.325	ENSMMUG00000002265	YTHDC1	65	66.667	Macaca_mulatta
ENSFHEG00000001286	ythdc1	60	56.325	ENSMNEG00000033751	YTHDC1	65	66.667	Macaca_nemestrina
ENSFHEG00000001286	ythdc1	60	56.325	ENSMLEG00000042147	YTHDC1	64	67.925	Mandrillus_leucophaeus
ENSFHEG00000001286	ythdc1	67	77.104	ENSMAMG00000013122	ythdc1	75	66.414	Mastacembelus_armatus
ENSFHEG00000001286	ythdc1	60	55.723	ENSMGAG00000010391	YTHDC1	68	53.968	Meleagris_gallopavo
ENSFHEG00000001286	ythdc1	60	55.000	ENSMAUG00000001286	Ythdc1	66	60.317	Mesocricetus_auratus
ENSFHEG00000001286	ythdc1	60	56.627	ENSMICG00000034640	YTHDC1	63	67.925	Microcebus_murinus
ENSFHEG00000001286	ythdc1	60	55.128	ENSMOCG00000020201	Ythdc1	66	67.273	Microtus_ochrogaster
ENSFHEG00000001286	ythdc1	66	72.391	ENSMMOG00000021200	ythdc1	81	62.921	Mola_mola
ENSFHEG00000001286	ythdc1	61	55.357	ENSMODG00000020754	-	68	57.143	Monodelphis_domestica
ENSFHEG00000001286	ythdc1	95	32.413	ENSMODG00000010076	-	50	42.816	Monodelphis_domestica
ENSFHEG00000001286	ythdc1	60	37.691	ENSMODG00000009173	-	74	42.529	Monodelphis_domestica
ENSFHEG00000001286	ythdc1	60	56.024	MGP_CAROLIEiJ_G0027347	Ythdc1	66	60.317	Mus_caroli
ENSFHEG00000001286	ythdc1	60	56.325	ENSMUSG00000035851	Ythdc1	66	60.317	Mus_musculus
ENSFHEG00000001286	ythdc1	60	56.024	MGP_PahariEiJ_G0017126	Ythdc1	66	60.317	Mus_pahari
ENSFHEG00000001286	ythdc1	60	56.024	MGP_SPRETEiJ_G0028339	Ythdc1	63	67.857	Mus_spretus
ENSFHEG00000001286	ythdc1	64	55.422	ENSMLUG00000016300	YTHDC1	65	67.925	Myotis_lucifugus
ENSFHEG00000001286	ythdc1	59	75.166	ENSNBRG00000007663	ythdc1	69	73.355	Neolamprologus_brichardi
ENSFHEG00000001286	ythdc1	60	54.118	ENSNLEG00000009202	YTHDC1	65	66.667	Nomascus_leucogenys
ENSFHEG00000001286	ythdc1	60	56.024	ENSODEG00000001715	YTHDC1	65	65.455	Octodon_degus
ENSFHEG00000001286	ythdc1	81	94.118	ENSONIG00000012651	ythdc1	71	94.286	Oreochromis_niloticus
ENSFHEG00000001286	ythdc1	65	69.355	ENSORLG00000030544	ythdc1	80	60.668	Oryzias_latipes
ENSFHEG00000001286	ythdc1	66	71.569	ENSORLG00020019316	ythdc1	80	62.222	Oryzias_latipes_hni
ENSFHEG00000001286	ythdc1	68	70.000	ENSOMEG00000000551	ythdc1	95	57.143	Oryzias_melastigma
ENSFHEG00000001286	ythdc1	60	56.627	ENSOGAG00000003362	YTHDC1	65	58.730	Otolemur_garnettii
ENSFHEG00000001286	ythdc1	60	54.819	ENSOARG00000008633	YTHDC1	65	58.730	Ovis_aries
ENSFHEG00000001286	ythdc1	60	55.449	ENSPPAG00000041315	YTHDC1	65	66.667	Pan_paniscus
ENSFHEG00000001286	ythdc1	60	54.487	ENSPPRG00000011979	YTHDC1	66	58.730	Panthera_pardus
ENSFHEG00000001286	ythdc1	60	53.846	ENSPTIG00000015527	YTHDC1	65	67.925	Panthera_tigris_altaica
ENSFHEG00000001286	ythdc1	60	55.449	ENSPTRG00000016105	YTHDC1	65	66.667	Pan_troglodytes
ENSFHEG00000001286	ythdc1	61	55.294	ENSPANG00000021590	YTHDC1	64	67.925	Papio_anubis
ENSFHEG00000001286	ythdc1	82	50.000	ENSPKIG00000018497	ythdc1	72	52.840	Paramormyrops_kingsleyae
ENSFHEG00000001286	ythdc1	65	55.060	ENSPSIG00000002782	YTHDC1	56	64.151	Pelodiscus_sinensis
ENSFHEG00000001286	ythdc1	50	64.158	ENSPMGG00000000970	-	70	65.683	Periophthalmus_magnuspinnatus
ENSFHEG00000001286	ythdc1	60	56.024	ENSPEMG00000013850	Ythdc1	65	69.811	Peromyscus_maniculatus_bairdii
ENSFHEG00000001286	ythdc1	61	55.357	ENSPCIG00000006870	YTHDC1	68	57.143	Phascolarctos_cinereus
ENSFHEG00000001286	ythdc1	75	78.333	ENSPREG00000016973	ythdc1	96	64.696	Poecilia_reticulata
ENSFHEG00000001286	ythdc1	60	55.120	ENSPVAG00000015551	YTHDC1	65	58.730	Pteropus_vampyrus
ENSFHEG00000001286	ythdc1	62	58.112	ENSPNAG00000028365	ythdc1	69	63.380	Pygocentrus_nattereri
ENSFHEG00000001286	ythdc1	60	55.000	ENSRNOG00000001996	Ythdc1	66	60.317	Rattus_norvegicus
ENSFHEG00000001286	ythdc1	60	56.325	ENSRROG00000035028	YTHDC1	65	66.667	Rhinopithecus_roxellana
ENSFHEG00000001286	ythdc1	60	55.449	ENSSBOG00000022353	YTHDC1	65	66.667	Saimiri_boliviensis_boliviensis
ENSFHEG00000001286	ythdc1	56	55.357	ENSSHAG00000002538	YTHDC1	67	66.038	Sarcophilus_harrisii
ENSFHEG00000001286	ythdc1	81	48.201	ENSSFOG00015003298	ythdc1	74	49.302	Scleropages_formosus
ENSFHEG00000001286	ythdc1	54	49.165	ENSSPUG00000009357	YTHDC1	62	48.936	Sphenodon_punctatus
ENSFHEG00000001286	ythdc1	68	75.908	ENSSPAG00000011449	ythdc1	77	68.561	Stegastes_partitus
ENSFHEG00000001286	ythdc1	60	55.723	ENSSSCG00000035505	YTHDC1	63	68.519	Sus_scrofa
ENSFHEG00000001286	ythdc1	61	55.357	ENSTGUG00000004452	-	67	60.377	Taeniopygia_guttata
ENSFHEG00000001286	ythdc1	55	67.003	ENSTRUG00000010142	ythdc1	54	78.049	Takifugu_rubripes
ENSFHEG00000001286	ythdc1	94	58.075	ENSTNIG00000013243	ythdc1	75	73.134	Tetraodon_nigroviridis
ENSFHEG00000001286	ythdc1	59	55.589	ENSTBEG00000011546	YTHDC1	58	52.722	Tupaia_belangeri
ENSFHEG00000001286	ythdc1	61	54.518	ENSTTRG00000005083	YTHDC1	65	58.730	Tursiops_truncatus
ENSFHEG00000001286	ythdc1	63	50.505	ENSUMAG00000013668	YTHDC1	69	66.071	Ursus_maritimus
ENSFHEG00000001286	ythdc1	60	53.526	ENSVPAG00000009040	YTHDC1	65	58.730	Vicugna_pacos
ENSFHEG00000001286	ythdc1	60	54.412	ENSVVUG00000005387	YTHDC1	64	65.455	Vulpes_vulpes
ENSFHEG00000001286	ythdc1	93	42.550	ENSXETG00000017960	ythdc1	92	41.807	Xenopus_tropicalis
ENSFHEG00000001286	ythdc1	54	75.109	ENSXCOG00000000530	ythdc1	84	72.926	Xiphophorus_couchianus