EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSFHEG00000001300 (Gene tree)
Gene ID: 105921946
Gene Symbol: prpf4
Alias: mg:ab03a02|zgc:65943
Full Name: pre-mRNA processing factor 4
Gene Type: protein_coding
Species: Fundulus_heteroclitus
Status: putative
Strand: Plus strand
Length: 10845 bases
Position: chrKN806414.1:48621-59465
Accession: 105921946
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSFHEP00000000589	PRP4	PF08799.11	2.5e-14	1	1
ENSFHEP00000021515	PRP4	PF08799.11	2.5e-14	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSFHET00000015284	-	1527	-	ENSFHEP00000000589	508 (aa)	-	-
ENSFHET00000015278	-	2277	XM_021313719	ENSFHEP00000021515	510 (aa)	XP_021169394	A0A147AL31

Gene Model

Click here to download ENSFHEG00000001300's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSFHEG00000001300's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSFHEG00000001300	prpf4	58	30.627	ENSFHEG00000002234	tbl3	68	30.627
ENSFHEG00000001300	prpf4	58	33.125	ENSFHEG00000015504	POC1A	78	33.125
ENSFHEG00000001300	prpf4	58	30.244	ENSFHEG00000014661	wdr5	88	30.244

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSFHEG00000001300	prpf4	99	76.190	ENSG00000136875	PRPF4	96	76.190	Homo_sapiens
ENSFHEG00000001300	prpf4	99	90.476	ENSAPOG00000014132	prpf4	99	90.476	Acanthochromis_polyacanthus
ENSFHEG00000001300	prpf4	99	76.190	ENSAMEG00000013048	PRPF4	94	76.190	Ailuropoda_melanoleuca
ENSFHEG00000001300	prpf4	100	92.353	ENSACIG00000005579	prpf4	100	92.353	Amphilophus_citrinellus
ENSFHEG00000001300	prpf4	100	90.784	ENSAOCG00000005457	prpf4	100	90.784	Amphiprion_ocellaris
ENSFHEG00000001300	prpf4	100	90.588	ENSAPEG00000000776	prpf4	100	90.588	Amphiprion_percula
ENSFHEG00000001300	prpf4	100	90.980	ENSATEG00000023013	prpf4	100	90.980	Anabas_testudineus
ENSFHEG00000001300	prpf4	99	76.923	ENSAPLG00000006534	PRPF4	94	76.923	Anas_platyrhynchos
ENSFHEG00000001300	prpf4	99	74.755	ENSACAG00000015110	PRPF4	98	74.755	Anolis_carolinensis
ENSFHEG00000001300	prpf4	99	76.190	ENSANAG00000022464	PRPF4	93	76.190	Aotus_nancymaae
ENSFHEG00000001300	prpf4	100	92.549	ENSACLG00000019031	prpf4	100	92.549	Astatotilapia_calliptera
ENSFHEG00000001300	prpf4	100	61.217	ENSAMXG00000006756	prpf4	100	72.941	Astyanax_mexicanus
ENSFHEG00000001300	prpf4	99	76.190	ENSBTAG00000004571	PRPF4	96	76.190	Bos_taurus
ENSFHEG00000001300	prpf4	92	45.053	WBGene00007972	prp-4	96	45.053	Caenorhabditis_elegans
ENSFHEG00000001300	prpf4	99	76.190	ENSCJAG00000017856	PRPF4	96	76.190	Callithrix_jacchus
ENSFHEG00000001300	prpf4	99	76.190	ENSCAFG00000003224	PRPF4	93	76.190	Canis_familiaris
ENSFHEG00000001300	prpf4	99	76.190	ENSCAFG00020022637	PRPF4	97	76.190	Canis_lupus_dingo
ENSFHEG00000001300	prpf4	99	76.190	ENSCHIG00000024648	-	96	76.190	Capra_hircus
ENSFHEG00000001300	prpf4	99	76.389	ENSTSYG00000010366	PRPF4	96	76.389	Carlito_syrichta
ENSFHEG00000001300	prpf4	90	68.974	ENSCAPG00000008935	PRPF4	97	68.974	Cavia_aperea
ENSFHEG00000001300	prpf4	99	70.833	ENSCPOG00000014729	-	96	70.833	Cavia_porcellus
ENSFHEG00000001300	prpf4	99	75.794	ENSCPOG00000010747	-	96	75.794	Cavia_porcellus
ENSFHEG00000001300	prpf4	99	75.992	ENSCCAG00000028990	PRPF4	96	75.992	Cebus_capucinus
ENSFHEG00000001300	prpf4	99	76.190	ENSCATG00000021552	PRPF4	96	76.190	Cercocebus_atys
ENSFHEG00000001300	prpf4	99	76.389	ENSCLAG00000013448	PRPF4	96	76.389	Chinchilla_lanigera
ENSFHEG00000001300	prpf4	89	76.106	ENSCHOG00000007233	PRPF4	100	76.106	Choloepus_hoffmanni
ENSFHEG00000001300	prpf4	99	76.134	ENSCPBG00000019136	PRPF4	73	76.134	Chrysemys_picta_bellii
ENSFHEG00000001300	prpf4	97	61.245	ENSCING00000001299	-	95	61.245	Ciona_intestinalis
ENSFHEG00000001300	prpf4	98	60.236	ENSCSAVG00000009178	-	99	60.860	Ciona_savignyi
ENSFHEG00000001300	prpf4	99	76.190	ENSCANG00000003246	PRPF4	96	76.190	Colobus_angolensis_palliatus
ENSFHEG00000001300	prpf4	99	76.190	ENSCGRG00001016992	Prpf4	96	76.190	Cricetulus_griseus_chok1gshd
ENSFHEG00000001300	prpf4	99	76.190	ENSCGRG00000017560	Prpf4	96	76.190	Cricetulus_griseus_crigri
ENSFHEG00000001300	prpf4	100	88.039	ENSCSEG00000020451	prpf4	100	88.039	Cynoglossus_semilaevis
ENSFHEG00000001300	prpf4	100	80.980	ENSDARG00000067639	prpf4	100	80.980	Danio_rerio
ENSFHEG00000001300	prpf4	99	75.992	ENSDNOG00000013203	PRPF4	96	75.992	Dasypus_novemcinctus
ENSFHEG00000001300	prpf4	99	76.587	ENSDORG00000026275	Prpf4	96	76.587	Dipodomys_ordii
ENSFHEG00000001300	prpf4	99	50.091	FBgn0036733	U4-U6-60K	99	49.909	Drosophila_melanogaster
ENSFHEG00000001300	prpf4	99	76.786	ENSETEG00000020389	PRPF4	96	76.786	Echinops_telfairi
ENSFHEG00000001300	prpf4	99	68.539	ENSEBUG00000015229	prpf4	88	69.213	Eptatretus_burgeri
ENSFHEG00000001300	prpf4	99	76.190	ENSEASG00005022678	PRPF4	96	76.190	Equus_asinus_asinus
ENSFHEG00000001300	prpf4	99	76.190	ENSECAG00000007072	PRPF4	96	76.190	Equus_caballus
ENSFHEG00000001300	prpf4	84	81.172	ENSEEUG00000007480	PRPF4	83	81.172	Erinaceus_europaeus
ENSFHEG00000001300	prpf4	100	80.196	ENSELUG00000007510	prpf4	100	80.196	Esox_lucius
ENSFHEG00000001300	prpf4	99	76.190	ENSFCAG00000005514	PRPF4	96	76.190	Felis_catus
ENSFHEG00000001300	prpf4	99	76.298	ENSFALG00000005423	PRPF4	85	76.298	Ficedula_albicollis
ENSFHEG00000001300	prpf4	99	76.190	ENSFDAG00000005839	PRPF4	96	76.190	Fukomys_damarensis
ENSFHEG00000001300	prpf4	99	76.726	ENSGALG00000008857	PRPF4	94	76.726	Gallus_gallus
ENSFHEG00000001300	prpf4	94	90.274	ENSGAFG00000012164	prpf4	69	90.274	Gambusia_affinis
ENSFHEG00000001300	prpf4	100	80.859	ENSGACG00000015476	prpf4	100	80.664	Gasterosteus_aculeatus
ENSFHEG00000001300	prpf4	99	75.937	ENSGAGG00000025029	PRPF4	94	75.937	Gopherus_agassizii
ENSFHEG00000001300	prpf4	99	76.190	ENSGGOG00000006943	PRPF4	96	76.190	Gorilla_gorilla
ENSFHEG00000001300	prpf4	100	92.745	ENSHBUG00000000562	prpf4	100	92.745	Haplochromis_burtoni
ENSFHEG00000001300	prpf4	99	61.905	ENSHGLG00000003838	-	96	61.905	Heterocephalus_glaber_female
ENSFHEG00000001300	prpf4	95	65.644	ENSHGLG00000016628	-	95	65.849	Heterocephalus_glaber_female
ENSFHEG00000001300	prpf4	99	75.992	ENSHGLG00000015191	PRPF4	96	75.992	Heterocephalus_glaber_female
ENSFHEG00000001300	prpf4	99	61.905	ENSHGLG00100005571	-	96	61.905	Heterocephalus_glaber_male
ENSFHEG00000001300	prpf4	100	78.516	ENSIPUG00000017956	PRPF4	100	78.516	Ictalurus_punctatus
ENSFHEG00000001300	prpf4	99	76.190	ENSSTOG00000027833	PRPF4	96	76.190	Ictidomys_tridecemlineatus
ENSFHEG00000001300	prpf4	99	76.190	ENSJJAG00000008838	Prpf4	96	76.190	Jaculus_jaculus
ENSFHEG00000001300	prpf4	100	92.549	ENSKMAG00000013236	prpf4	100	92.549	Kryptolebias_marmoratus
ENSFHEG00000001300	prpf4	100	91.569	ENSLBEG00000020611	prpf4	100	91.569	Labrus_bergylta
ENSFHEG00000001300	prpf4	100	71.484	ENSLACG00000016317	PRPF4	97	71.484	Latimeria_chalumnae
ENSFHEG00000001300	prpf4	100	81.569	ENSLOCG00000000581	prpf4	100	81.569	Lepisosteus_oculatus
ENSFHEG00000001300	prpf4	99	76.190	ENSLAFG00000018225	PRPF4	96	76.190	Loxodonta_africana
ENSFHEG00000001300	prpf4	99	75.992	ENSMFAG00000039397	PRPF4	96	75.992	Macaca_fascicularis
ENSFHEG00000001300	prpf4	99	76.190	ENSMMUG00000005844	PRPF4	96	76.190	Macaca_mulatta
ENSFHEG00000001300	prpf4	99	67.460	ENSMNEG00000033737	PRPF4	96	67.460	Macaca_nemestrina
ENSFHEG00000001300	prpf4	99	76.190	ENSMLEG00000040284	PRPF4	96	76.190	Mandrillus_leucophaeus
ENSFHEG00000001300	prpf4	100	90.000	ENSMAMG00000020141	prpf4	100	90.000	Mastacembelus_armatus
ENSFHEG00000001300	prpf4	100	92.549	ENSMZEG00005023205	prpf4	100	92.549	Maylandia_zebra
ENSFHEG00000001300	prpf4	99	76.134	ENSMGAG00000001796	PRPF4	94	76.134	Meleagris_gallopavo
ENSFHEG00000001300	prpf4	99	76.190	ENSMAUG00000018022	Prpf4	96	76.190	Mesocricetus_auratus
ENSFHEG00000001300	prpf4	99	75.639	ENSMICG00000015022	PRPF4	97	75.639	Microcebus_murinus
ENSFHEG00000001300	prpf4	99	76.190	ENSMOCG00000018273	Prpf4	96	76.190	Microtus_ochrogaster
ENSFHEG00000001300	prpf4	100	89.020	ENSMMOG00000021177	prpf4	100	89.020	Mola_mola
ENSFHEG00000001300	prpf4	99	74.753	ENSMODG00000004444	-	97	74.753	Monodelphis_domestica
ENSFHEG00000001300	prpf4	99	74.359	ENSMODG00000025096	-	94	74.359	Monodelphis_domestica
ENSFHEG00000001300	prpf4	100	90.980	ENSMALG00000013624	prpf4	100	90.980	Monopterus_albus
ENSFHEG00000001300	prpf4	99	76.190	MGP_CAROLIEiJ_G0026078	Prpf4	96	76.190	Mus_caroli
ENSFHEG00000001300	prpf4	99	76.190	ENSMUSG00000066148	Prpf4	96	76.190	Mus_musculus
ENSFHEG00000001300	prpf4	99	76.389	MGP_PahariEiJ_G0028413	Prpf4	96	76.389	Mus_pahari
ENSFHEG00000001300	prpf4	99	76.190	MGP_SPRETEiJ_G0027042	Prpf4	96	76.190	Mus_spretus
ENSFHEG00000001300	prpf4	99	76.190	ENSMPUG00000007883	PRPF4	96	76.190	Mustela_putorius_furo
ENSFHEG00000001300	prpf4	99	75.992	ENSMLUG00000015309	-	93	75.992	Myotis_lucifugus
ENSFHEG00000001300	prpf4	99	74.603	ENSMLUG00000008626	-	94	74.603	Myotis_lucifugus
ENSFHEG00000001300	prpf4	99	71.032	ENSNGAG00000000468	Prpf4	96	71.032	Nannospalax_galili
ENSFHEG00000001300	prpf4	100	92.745	ENSNBRG00000007972	prpf4	100	92.745	Neolamprologus_brichardi
ENSFHEG00000001300	prpf4	99	76.190	ENSNLEG00000016647	PRPF4	96	76.190	Nomascus_leucogenys
ENSFHEG00000001300	prpf4	99	74.556	ENSMEUG00000013256	PRPF4	98	74.556	Notamacropus_eugenii
ENSFHEG00000001300	prpf4	99	76.587	ENSOPRG00000005302	PRPF4	96	76.587	Ochotona_princeps
ENSFHEG00000001300	prpf4	99	76.190	ENSODEG00000018147	PRPF4	96	76.190	Octodon_degus
ENSFHEG00000001300	prpf4	100	92.549	ENSONIG00000012671	prpf4	100	92.549	Oreochromis_niloticus
ENSFHEG00000001300	prpf4	99	76.389	ENSOCUG00000005046	PRPF4	96	76.389	Oryctolagus_cuniculus
ENSFHEG00000001300	prpf4	100	90.000	ENSORLG00000019641	prpf4	100	90.000	Oryzias_latipes
ENSFHEG00000001300	prpf4	100	90.000	ENSORLG00020019438	prpf4	100	90.000	Oryzias_latipes_hni
ENSFHEG00000001300	prpf4	100	89.216	ENSOMEG00000020941	prpf4	100	89.855	Oryzias_melastigma
ENSFHEG00000001300	prpf4	99	72.024	ENSOGAG00000007802	PRPF4	94	72.024	Otolemur_garnettii
ENSFHEG00000001300	prpf4	99	76.190	ENSOARG00000006319	PRPF4	93	76.190	Ovis_aries
ENSFHEG00000001300	prpf4	99	76.190	ENSPPAG00000041797	PRPF4	96	76.190	Pan_paniscus
ENSFHEG00000001300	prpf4	99	76.190	ENSPPRG00000014360	PRPF4	96	76.190	Panthera_pardus
ENSFHEG00000001300	prpf4	99	76.190	ENSPTIG00000009574	PRPF4	96	76.190	Panthera_tigris_altaica
ENSFHEG00000001300	prpf4	99	76.190	ENSPTRG00000021274	PRPF4	96	76.190	Pan_troglodytes
ENSFHEG00000001300	prpf4	99	76.389	ENSPANG00000025776	PRPF4	92	76.389	Papio_anubis
ENSFHEG00000001300	prpf4	100	80.980	ENSPKIG00000017259	prpf4	100	80.980	Paramormyrops_kingsleyae
ENSFHEG00000001300	prpf4	100	76.078	ENSPSIG00000010713	PRPF4	89	76.331	Pelodiscus_sinensis
ENSFHEG00000001300	prpf4	100	64.457	ENSPMGG00000000997	prpf4	98	65.930	Periophthalmus_magnuspinnatus
ENSFHEG00000001300	prpf4	99	76.190	ENSPEMG00000024115	Prpf4	96	76.190	Peromyscus_maniculatus_bairdii
ENSFHEG00000001300	prpf4	99	74.753	ENSPCIG00000003821	PRPF4	98	74.753	Phascolarctos_cinereus
ENSFHEG00000001300	prpf4	100	85.019	ENSPFOG00000013524	prpf4	99	89.058	Poecilia_formosa
ENSFHEG00000001300	prpf4	84	87.888	ENSPLAG00000011620	prpf4	99	85.106	Poecilia_latipinna
ENSFHEG00000001300	prpf4	99	89.381	ENSPMEG00000006813	prpf4	100	89.381	Poecilia_mexicana
ENSFHEG00000001300	prpf4	99	75.794	ENSPCAG00000002561	PRPF4	98	75.794	Procavia_capensis
ENSFHEG00000001300	prpf4	99	75.992	ENSPCOG00000011975	PRPF4	96	75.992	Propithecus_coquereli
ENSFHEG00000001300	prpf4	99	73.016	ENSPVAG00000004708	PRPF4	96	73.016	Pteropus_vampyrus
ENSFHEG00000001300	prpf4	100	92.549	ENSPNYG00000008013	prpf4	100	92.549	Pundamilia_nyererei
ENSFHEG00000001300	prpf4	100	78.824	ENSPNAG00000000697	prpf4	100	78.824	Pygocentrus_nattereri
ENSFHEG00000001300	prpf4	99	76.190	ENSRNOG00000014777	Prpf4	96	76.190	Rattus_norvegicus
ENSFHEG00000001300	prpf4	99	76.190	ENSRBIG00000040221	PRPF4	96	76.190	Rhinopithecus_bieti
ENSFHEG00000001300	prpf4	99	76.190	ENSRROG00000040240	PRPF4	96	76.190	Rhinopithecus_roxellana
ENSFHEG00000001300	prpf4	99	74.753	ENSSHAG00000017658	PRPF4	97	74.753	Sarcophilus_harrisii
ENSFHEG00000001300	prpf4	100	80.980	ENSSFOG00015008963	prpf4	100	80.980	Scleropages_formosus
ENSFHEG00000001300	prpf4	100	90.392	ENSSMAG00000008889	prpf4	100	90.392	Scophthalmus_maximus
ENSFHEG00000001300	prpf4	99	91.097	ENSSDUG00000022083	prpf4	94	91.097	Seriola_dumerili
ENSFHEG00000001300	prpf4	99	91.097	ENSSLDG00000008115	prpf4	94	91.097	Seriola_lalandi_dorsalis
ENSFHEG00000001300	prpf4	99	76.228	ENSSPUG00000015582	PRPF4	97	76.228	Sphenodon_punctatus
ENSFHEG00000001300	prpf4	100	84.016	ENSSPAG00000011286	prpf4	100	84.016	Stegastes_partitus
ENSFHEG00000001300	prpf4	99	76.190	ENSSSCG00000024648	PRPF4	96	76.190	Sus_scrofa
ENSFHEG00000001300	prpf4	97	77.778	ENSTGUG00000002623	PRPF4	100	78.004	Taeniopygia_guttata
ENSFHEG00000001300	prpf4	100	87.059	ENSTRUG00000008853	prpf4	100	87.059	Takifugu_rubripes
ENSFHEG00000001300	prpf4	100	87.059	ENSTNIG00000013250	prpf4	100	87.280	Tetraodon_nigroviridis
ENSFHEG00000001300	prpf4	99	69.048	ENSTBEG00000000821	PRPF4	96	69.048	Tupaia_belangeri
ENSFHEG00000001300	prpf4	89	78.188	ENSTTRG00000003246	PRPF4	85	78.188	Tursiops_truncatus
ENSFHEG00000001300	prpf4	61	72.168	ENSUAMG00000018288	PRPF4	88	72.168	Ursus_americanus
ENSFHEG00000001300	prpf4	99	75.595	ENSUMAG00000019375	PRPF4	96	75.595	Ursus_maritimus
ENSFHEG00000001300	prpf4	99	75.794	ENSVPAG00000005281	PRPF4	96	75.794	Vicugna_pacos
ENSFHEG00000001300	prpf4	99	75.394	ENSVVUG00000002476	PRPF4	99	75.394	Vulpes_vulpes
ENSFHEG00000001300	prpf4	70	67.308	ENSXCOG00000006101	prpf4	93	69.417	Xiphophorus_couchianus
ENSFHEG00000001300	prpf4	91	78.495	ENSXMAG00000002750	prpf4	100	79.142	Xiphophorus_maculatus