EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSFHEG00000001701 (Gene tree)
Gene ID: 105934672
Gene Symbol: hdlbpb
Alias: fa07b03|sb:eu532|si:dkey-38p12.2|wu:fa07b03
Full Name: vigilin-like
Gene Type: protein_coding
Species: Fundulus_heteroclitus
Status: putative
Strand: Minus strand
Length: 18991 bases
Position: chrKN811435.1:949164-968154
Accession: 105934672
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSFHEP00000000942	KH_1	PF00013.29	1.5e-172	1	13
ENSFHEP00000000942	KH_1	PF00013.29	1.5e-172	2	13
ENSFHEP00000000942	KH_1	PF00013.29	1.5e-172	3	13
ENSFHEP00000000942	KH_1	PF00013.29	1.5e-172	4	13
ENSFHEP00000000942	KH_1	PF00013.29	1.5e-172	5	13
ENSFHEP00000000942	KH_1	PF00013.29	1.5e-172	6	13
ENSFHEP00000000942	KH_1	PF00013.29	1.5e-172	7	13
ENSFHEP00000000942	KH_1	PF00013.29	1.5e-172	8	13
ENSFHEP00000000942	KH_1	PF00013.29	1.5e-172	9	13
ENSFHEP00000000942	KH_1	PF00013.29	1.5e-172	10	13
ENSFHEP00000000942	KH_1	PF00013.29	1.5e-172	11	13
ENSFHEP00000000942	KH_1	PF00013.29	1.5e-172	12	13
ENSFHEP00000000942	KH_1	PF00013.29	1.5e-172	13	13

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSFHET00000014698	-	3681	XM_021322679	ENSFHEP00000000942	1226 (aa)	XP_021178354	-

Gene Model

Click here to download ENSFHEG00000001701's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSFHEG00000001701's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSFHEG00000001701	hdlbpb	100	90.615	ENSAPOG00000006904	hdlbpb	100	82.691	Acanthochromis_polyacanthus
ENSFHEG00000001701	hdlbpb	100	84.906	ENSACIG00000016154	hdlbpb	100	85.535	Amphilophus_citrinellus
ENSFHEG00000001701	hdlbpb	100	91.325	ENSAOCG00000004083	hdlbpb	88	34.404	Amphiprion_ocellaris
ENSFHEG00000001701	hdlbpb	100	91.246	ENSAPEG00000012270	hdlbpb	87	34.713	Amphiprion_percula
ENSFHEG00000001701	hdlbpb	100	90.379	ENSATEG00000019877	hdlbpb	88	34.322	Anabas_testudineus
ENSFHEG00000001701	hdlbpb	100	77.111	ENSACAG00000003606	-	100	76.953	Anolis_carolinensis
ENSFHEG00000001701	hdlbpb	100	90.536	ENSACLG00000006618	hdlbpb	100	84.322	Astatotilapia_calliptera
ENSFHEG00000001701	hdlbpb	100	72.813	ENSAMXG00000019946	hdlbpb	100	63.475	Astyanax_mexicanus
ENSFHEG00000001701	hdlbpb	100	89.748	ENSCSEG00000000955	hdlbpb	87	34.122	Cynoglossus_semilaevis
ENSFHEG00000001701	hdlbpb	100	92.508	ENSCVAG00000005345	hdlbpb	100	34.769	Cyprinodon_variegatus
ENSFHEG00000001701	hdlbpb	99	80.727	ENSDARG00000061864	hdlbpb	99	80.727	Danio_rerio
ENSFHEG00000001701	hdlbpb	92	65.668	ENSEBUG00000005304	hdlbpb	94	66.376	Eptatretus_burgeri
ENSFHEG00000001701	hdlbpb	86	62.263	ENSELUG00000019925	hdlbpb	100	46.845	Esox_lucius
ENSFHEG00000001701	hdlbpb	95	79.310	ENSGMOG00000004522	hdlbpb	78	79.310	Gadus_morhua
ENSFHEG00000001701	hdlbpb	100	92.508	ENSGAFG00000005278	hdlbpb	87	34.870	Gambusia_affinis
ENSFHEG00000001701	hdlbpb	99	86.740	ENSGACG00000019361	hdlbpb	87	33.108	Gasterosteus_aculeatus
ENSFHEG00000001701	hdlbpb	100	90.379	ENSHBUG00000018434	hdlbpb	87	34.291	Haplochromis_burtoni
ENSFHEG00000001701	hdlbpb	100	80.536	ENSIPUG00000003291	HDLBP	96	34.034	Ictalurus_punctatus
ENSFHEG00000001701	hdlbpb	100	91.798	ENSKMAG00000016562	hdlbpb	100	83.562	Kryptolebias_marmoratus
ENSFHEG00000001701	hdlbpb	100	89.984	ENSLBEG00000027855	hdlbpb	87	34.459	Labrus_bergylta
ENSFHEG00000001701	hdlbpb	100	67.261	ENSLACG00000007661	hdlbpb	100	67.261	Latimeria_chalumnae
ENSFHEG00000001701	hdlbpb	100	77.681	ENSLOCG00000013909	hdlbpb	100	58.865	Lepisosteus_oculatus
ENSFHEG00000001701	hdlbpb	100	91.325	ENSMAMG00000003035	hdlbpb	88	34.204	Mastacembelus_armatus
ENSFHEG00000001701	hdlbpb	100	90.536	ENSMZEG00005021465	hdlbpb	100	84.322	Maylandia_zebra
ENSFHEG00000001701	hdlbpb	100	89.100	ENSMMOG00000012525	hdlbpb	87	35.210	Mola_mola
ENSFHEG00000001701	hdlbpb	100	88.486	ENSMALG00000008938	hdlbpb	87	33.897	Monopterus_albus
ENSFHEG00000001701	hdlbpb	100	90.615	ENSNBRG00000002236	hdlbpb	87	34.375	Neolamprologus_brichardi
ENSFHEG00000001701	hdlbpb	100	90.221	ENSONIG00000009211	hdlbpb	87	34.375	Oreochromis_niloticus
ENSFHEG00000001701	hdlbpb	100	89.669	ENSORLG00000006581	hdlbpb	100	32.473	Oryzias_latipes
ENSFHEG00000001701	hdlbpb	100	89.905	ENSORLG00020010012	hdlbpb	87	33.726	Oryzias_latipes_hni
ENSFHEG00000001701	hdlbpb	100	90.063	ENSORLG00015006863	hdlbpb	93	73.149	Oryzias_latipes_hsok
ENSFHEG00000001701	hdlbpb	100	90.063	ENSOMEG00000011131	hdlbpb	88	34.206	Oryzias_melastigma
ENSFHEG00000001701	hdlbpb	100	83.662	ENSPKIG00000005966	hdlbpb	87	33.726	Paramormyrops_kingsleyae
ENSFHEG00000001701	hdlbpb	86	77.500	ENSPMGG00000019853	hdlbpb	98	54.701	Periophthalmus_magnuspinnatus
ENSFHEG00000001701	hdlbpb	94	69.298	ENSPMAG00000002131	hdlbpb	100	69.298	Petromyzon_marinus
ENSFHEG00000001701	hdlbpb	85	64.238	ENSPMAG00000000249	-	99	64.103	Petromyzon_marinus
ENSFHEG00000001701	hdlbpb	100	91.732	ENSPFOG00000008755	hdlbpb	87	34.365	Poecilia_formosa
ENSFHEG00000001701	hdlbpb	100	92.744	ENSPLAG00000007055	hdlbpb	87	34.768	Poecilia_latipinna
ENSFHEG00000001701	hdlbpb	100	92.823	ENSPMEG00000001952	hdlbpb	87	34.768	Poecilia_mexicana
ENSFHEG00000001701	hdlbpb	100	92.587	ENSPREG00000012848	hdlbpb	87	34.515	Poecilia_reticulata
ENSFHEG00000001701	hdlbpb	100	90.600	ENSPNYG00000022467	hdlbpb	88	34.375	Pundamilia_nyererei
ENSFHEG00000001701	hdlbpb	100	82.715	ENSPNAG00000011104	hdlbpb	87	34.315	Pygocentrus_nattereri
ENSFHEG00000001701	hdlbpb	100	82.794	ENSSFOG00015023199	hdlbpb	87	33.473	Scleropages_formosus
ENSFHEG00000001701	hdlbpb	100	90.300	ENSSMAG00000008790	hdlbpb	87	34.375	Scophthalmus_maximus
ENSFHEG00000001701	hdlbpb	100	91.239	ENSSDUG00000020694	hdlbpb	87	34.658	Seriola_dumerili
ENSFHEG00000001701	hdlbpb	100	90.995	ENSSLDG00000020807	hdlbpb	87	34.775	Seriola_lalandi_dorsalis
ENSFHEG00000001701	hdlbpb	100	77.664	ENSSPUG00000018688	-	88	33.667	Sphenodon_punctatus
ENSFHEG00000001701	hdlbpb	100	91.325	ENSSPAG00000016969	hdlbpb	87	34.768	Stegastes_partitus
ENSFHEG00000001701	hdlbpb	98	87.015	ENSTRUG00000012888	hdlbpb	87	34.428	Takifugu_rubripes
ENSFHEG00000001701	hdlbpb	99	88.645	ENSTNIG00000002555	hdlbpb	87	33.724	Tetraodon_nigroviridis
ENSFHEG00000001701	hdlbpb	100	58.153	ENSXCOG00000001797	hdlbpb	100	58.153	Xiphophorus_couchianus
ENSFHEG00000001701	hdlbpb	100	91.956	ENSXMAG00000015633	hdlbpb	87	34.768	Xiphophorus_maculatus