EuRBPDB

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  • Description
  • RBDs
  • Transcripts
  • Gene Model
  • PPI
  • Paralogs
  • Orthologs
Description
Ensembl ID
ENSFHEG00000001768 (Gene tree)
Gene ID
105934649
Gene Symbol
polr2a
Alias
im:7136071
Full Name
RNA polymerase II subunit A
Gene Type
protein_coding
Species
Fundulus_heteroclitus
Status
putative
Strand
Minus strand
Length
18118 bases
Position
chrKN811435.1:824943-843060
Accession
105934649
RBP type
canonical RBP
Summary
-
RNA binding domains(RBDs)
Protein IDDomain Pfam IDE-value Domain number Total number
ENSFHEP00000021794RNA_pol_Rpb1_5PF04998.172.7e-10111
ENSFHEP00000021794RNA_pol_Rpb1_RPF05001.131.3e-25131
ENSFHEP00000021794RNA_pol_Rpb1_RPF05001.131.3e-25231
ENSFHEP00000021794RNA_pol_Rpb1_RPF05001.131.3e-25331
ENSFHEP00000021794RNA_pol_Rpb1_RPF05001.131.3e-25431
ENSFHEP00000021794RNA_pol_Rpb1_RPF05001.131.3e-25531
ENSFHEP00000021794RNA_pol_Rpb1_RPF05001.131.3e-25631
ENSFHEP00000021794RNA_pol_Rpb1_RPF05001.131.3e-25731
ENSFHEP00000021794RNA_pol_Rpb1_RPF05001.131.3e-25831
ENSFHEP00000021794RNA_pol_Rpb1_RPF05001.131.3e-25931
ENSFHEP00000021794RNA_pol_Rpb1_RPF05001.131.3e-251031
ENSFHEP00000021794RNA_pol_Rpb1_RPF05001.131.3e-251131
ENSFHEP00000021794RNA_pol_Rpb1_RPF05001.131.3e-251231
ENSFHEP00000021794RNA_pol_Rpb1_RPF05001.131.3e-251331
ENSFHEP00000021794RNA_pol_Rpb1_RPF05001.131.3e-251431
ENSFHEP00000021794RNA_pol_Rpb1_RPF05001.131.3e-251531
ENSFHEP00000021794RNA_pol_Rpb1_RPF05001.131.3e-251631
ENSFHEP00000021794RNA_pol_Rpb1_RPF05001.131.3e-251731
ENSFHEP00000021794RNA_pol_Rpb1_RPF05001.131.3e-251831
ENSFHEP00000021794RNA_pol_Rpb1_RPF05001.131.3e-251931
ENSFHEP00000021794RNA_pol_Rpb1_RPF05001.131.3e-252031
ENSFHEP00000021794RNA_pol_Rpb1_RPF05001.131.3e-252131
ENSFHEP00000021794RNA_pol_Rpb1_RPF05001.131.3e-252231
ENSFHEP00000021794RNA_pol_Rpb1_RPF05001.131.3e-252331
ENSFHEP00000021794RNA_pol_Rpb1_RPF05001.131.3e-252431
ENSFHEP00000021794RNA_pol_Rpb1_RPF05001.131.3e-252531
ENSFHEP00000021794RNA_pol_Rpb1_RPF05001.131.3e-252631
ENSFHEP00000021794RNA_pol_Rpb1_RPF05001.131.3e-252731
ENSFHEP00000021794RNA_pol_Rpb1_RPF05001.131.3e-252831
ENSFHEP00000021794RNA_pol_Rpb1_RPF05001.131.3e-252931
ENSFHEP00000021794RNA_pol_Rpb1_RPF05001.131.3e-253031
ENSFHEP00000021794RNA_pol_Rpb1_RPF05001.131.3e-253131
ENSFHEP00000021794RNA_pol_Rpb1_4PF05000.171.3e-3711
ENSFHEP00000021794RNA_pol_Rpb1_2PF00623.206e-7511
ENSFHEP00000021794RNA_pol_Rpb1_3PF04983.182.8e-5011
ENSFHEP00000021794RNA_pol_Rpb1_1PF04997.121.2e-10811
ENSFHEP00000021794RNA_pol_Rpb1_7PF04990.124.9e-5511
ENSFHEP00000021794RNA_pol_Rpb1_6PF04992.146.4e-6711
Transcripts
Transcript IDNameLengthRefSeq ID Protein IDLengthRefSeq IDUniportKB ID
ENSFHET00000014557-6215XM_012874740ENSFHEP000000217941916 (aa)XP_012730194-
Gene Model
Click here to download ENSFHEG00000001768's gene model file
Protein-Protein Interaction (PPI)

Clik here to download ENSFHEG00000001768's network
Paralogs
Ensembl IDGene SymbolCoverageIdentiy ParalogGene SymbolCoverageIdentiy
ENSFHEG00000001768polr2a5831.926ENSFHEG00000005996polr1a7031.857
ENSFHEG00000001768polr2a6243.704ENSFHEG00000011922polr3a8743.704
Orthologs
Ensembl IDGene SymbolCoverageIdentiy OrthologGene SymbolCoverageIdentiy Species
ENSFHEG00000001768polr2a8498.387ENSAPOG00000006552polr2a8298.387Acanthochromis_polyacanthus
ENSFHEG00000001768polr2a9894.300ENSAMEG00000016265-8594.307Ailuropoda_melanoleuca
ENSFHEG00000001768polr2a9995.161ENSACIG00000015982polr2a9996.294Amphilophus_citrinellus
ENSFHEG00000001768polr2a9198.511ENSAOCG00000004255polr2a9994.565Amphiprion_ocellaris
ENSFHEG00000001768polr2a10098.591ENSAPEG00000012623polr2a9998.591Amphiprion_percula
ENSFHEG00000001768polr2a10098.121ENSATEG00000019644polr2a9998.121Anabas_testudineus
ENSFHEG00000001768polr2a9794.720ENSACAG00000014561POLR2A8594.727Anolis_carolinensis
ENSFHEG00000001768polr2a9894.662ENSANAG00000020093-9192.498Aotus_nancymaae
ENSFHEG00000001768polr2a10097.704ENSACLG00000006735polr2a9997.704Astatotilapia_calliptera
ENSFHEG00000001768polr2a10097.704ENSAMXG00000020046polr2a9997.704Astyanax_mexicanus
ENSFHEG00000001768polr2a9894.662ENSBTAG00000046765POLR2A8594.668Bos_taurus
ENSFHEG00000001768polr2a9970.202WBGene00000123ama-19676.389Caenorhabditis_elegans
ENSFHEG00000001768polr2a9594.600ENSCAFG00000016532POLR2A9894.606Canis_familiaris
ENSFHEG00000001768polr2a9993.734ENSCAFG00020007929-9191.754Canis_lupus_dingo
ENSFHEG00000001768polr2a9894.662ENSCHIG00000027173-8594.668Capra_hircus
ENSFHEG00000001768polr2a9992.117ENSTSYG00000012803-9990.048Carlito_syrichta
ENSFHEG00000001768polr2a9891.106ENSCAPG00000001882-9993.679Cavia_aperea
ENSFHEG00000001768polr2a10091.093ENSCPOG00000014812-9993.490Cavia_porcellus
ENSFHEG00000001768polr2a9894.662ENSCCAG00000020938-9192.498Cebus_capucinus
ENSFHEG00000001768polr2a9994.662ENSCATG00000013680-9191.816Cercocebus_atys
ENSFHEG00000001768polr2a9894.538ENSCLAG00000012196-9192.374Chinchilla_lanigera
ENSFHEG00000001768polr2a9985.873ENSCSAG00000011644-8585.890Chlorocebus_sabaeus
ENSFHEG00000001768polr2a9591.056ENSCPBG00000012697POLR2A9983.774Chrysemys_picta_bellii
ENSFHEG00000001768polr2a9279.630ENSCSAVG00000008334-9981.347Ciona_savignyi
ENSFHEG00000001768polr2a9893.979ENSCANG00000010622-9190.976Colobus_angolensis_palliatus
ENSFHEG00000001768polr2a9688.261ENSCGRG00001003538Polr2a9287.500Cricetulus_griseus_chok1gshd
ENSFHEG00000001768polr2a8490.965ENSCGRG00000012105Polr2a9090.748Cricetulus_griseus_crigri
ENSFHEG00000001768polr2a10097.338ENSCSEG00000002635polr2a9997.338Cynoglossus_semilaevis
ENSFHEG00000001768polr2a10099.426ENSCVAG00000005156polr2a9999.426Cyprinodon_variegatus
ENSFHEG00000001768polr2a10097.183ENSDARG00000099966polr2a9997.183Danio_rerio
ENSFHEG00000001768polr2a9991.744ENSDNOG00000016482-8591.754Dasypus_novemcinctus
ENSFHEG00000001768polr2a9894.662ENSDORG00000008667Polr2a9192.498Dipodomys_ordii
ENSFHEG00000001768polr2a9970.681FBgn0003277RpII2159175.217Drosophila_melanogaster
ENSFHEG00000001768polr2a9490.569ENSETEG00000002540-8891.695Echinops_telfairi
ENSFHEG00000001768polr2a8487.399ENSEBUG00000013967polr2a8987.383Eptatretus_burgeri
ENSFHEG00000001768polr2a9990.130ENSEASG00005019114-9092.684Equus_asinus_asinus
ENSFHEG00000001768polr2a9894.662ENSECAG00000018485POLR2A8594.668Equus_caballus
ENSFHEG00000001768polr2a8594.526ENSEEUG00000001154-9594.526Erinaceus_europaeus
ENSFHEG00000001768polr2a9492.478ENSELUG00000014284polr2a9093.157Esox_lucius
ENSFHEG00000001768polr2a9894.600ENSFDAG00000008287-8594.606Fukomys_damarensis
ENSFHEG00000001768polr2a9693.193ENSGMOG00000007725polr2a10093.160Gadus_morhua
ENSFHEG00000001768polr2a10094.216ENSGAFG00000005389polr2a9994.772Gambusia_affinis
ENSFHEG00000001768polr2a9993.894ENSGACG00000019366polr2a10093.670Gasterosteus_aculeatus
ENSFHEG00000001768polr2a9892.570ENSGGOG00000014800-9693.096Gorilla_gorilla
ENSFHEG00000001768polr2a9997.744ENSHBUG00000018937polr2a10097.744Haplochromis_burtoni
ENSFHEG00000001768polr2a9894.600ENSHGLG00000012381POLR2A9192.436Heterocephalus_glaber_female
ENSFHEG00000001768polr2a9894.600ENSHGLG00100014843POLR2A9192.436Heterocephalus_glaber_male
ENSFHEG00000001768polr2a10097.599ENSHCOG00000011874polr2a9997.599Hippocampus_comes
ENSFHEG00000001768polr2a10097.077ENSIPUG00000002613Polr2a9997.077Ictalurus_punctatus
ENSFHEG00000001768polr2a9894.662ENSSTOG00000001304-9192.498Ictidomys_tridecemlineatus
ENSFHEG00000001768polr2a9894.662ENSJJAG00000013049Polr2a9192.498Jaculus_jaculus
ENSFHEG00000001768polr2a8377.902ENSKMAG00000016343polr2a8578.026Kryptolebias_marmoratus
ENSFHEG00000001768polr2a10098.017ENSLBEG00000027652polr2a9998.017Labrus_bergylta
ENSFHEG00000001768polr2a9385.262ENSLACG00000012071POLR2A8885.335Latimeria_chalumnae
ENSFHEG00000001768polr2a9897.290ENSLOCG00000013863polr2a9093.298Lepisosteus_oculatus
ENSFHEG00000001768polr2a9894.662ENSLAFG00000008626-9294.668Loxodonta_africana
ENSFHEG00000001768polr2a5193.361ENSMFAG00000007042-9993.361Macaca_fascicularis
ENSFHEG00000001768polr2a9994.662ENSMMUG00000023620-8994.668Macaca_mulatta
ENSFHEG00000001768polr2a9894.227ENSMNEG00000040407-9192.064Macaca_nemestrina
ENSFHEG00000001768polr2a9887.595ENSMLEG00000030263-9993.361Mandrillus_leucophaeus
ENSFHEG00000001768polr2a10098.225ENSMAMG00000003351polr2a9998.225Mastacembelus_armatus
ENSFHEG00000001768polr2a10097.704ENSMZEG00005021429polr2a9997.704Maylandia_zebra
ENSFHEG00000001768polr2a5194.190ENSMAUG00000021055-9994.190Mesocricetus_auratus
ENSFHEG00000001768polr2a9894.600ENSMICG00000013372-9893.756Microcebus_murinus
ENSFHEG00000001768polr2a10090.087ENSMOCG00000018279Polr2a9990.297Microtus_ochrogaster
ENSFHEG00000001768polr2a9897.667ENSMMOG00000012515polr2a9697.667Mola_mola
ENSFHEG00000001768polr2a9894.413ENSMODG00000007009-8594.420Monodelphis_domestica
ENSFHEG00000001768polr2a9997.585ENSMALG00000008716polr2a9797.585Monopterus_albus
ENSFHEG00000001768polr2a9894.662MGP_CAROLIEiJ_G0016587Polr2a9192.498Mus_caroli
ENSFHEG00000001768polr2a9894.662ENSMUSG00000005198Polr2a9192.498Mus_musculus
ENSFHEG00000001768polr2a9992.522MGP_PahariEiJ_G0017718Polr2a8592.531Mus_pahari
ENSFHEG00000001768polr2a9894.662MGP_SPRETEiJ_G0017423Polr2a9192.498Mus_spretus
ENSFHEG00000001768polr2a9894.538ENSMPUG00000009648-8594.544Mustela_putorius_furo
ENSFHEG00000001768polr2a9994.048ENSMLUG00000009088-8594.056Myotis_lucifugus
ENSFHEG00000001768polr2a9894.662ENSNGAG00000002543Polr2a9192.498Nannospalax_galili
ENSFHEG00000001768polr2a9994.727ENSNBRG00000002005polr2a9995.877Neolamprologus_brichardi
ENSFHEG00000001768polr2a9992.117ENSNLEG00000009460-9192.498Nomascus_leucogenys
ENSFHEG00000001768polr2a9395.207ENSMEUG00000008611-9686.775Notamacropus_eugenii
ENSFHEG00000001768polr2a8394.378ENSOPRG00000015116-9994.378Ochotona_princeps
ENSFHEG00000001768polr2a8794.522ENSODEG00000017674-9889.975Octodon_degus
ENSFHEG00000001768polr2a10097.965ENSONIG00000009231polr2a9997.965Oreochromis_niloticus
ENSFHEG00000001768polr2a9993.440ENSOCUG00000017929-9994.544Oryctolagus_cuniculus
ENSFHEG00000001768polr2a10098.225ENSORLG00000006431polr2a9998.225Oryzias_latipes
ENSFHEG00000001768polr2a10098.225ENSORLG00020010235polr2a9998.225Oryzias_latipes_hni
ENSFHEG00000001768polr2a10098.121ENSORLG00015007075polr2a9998.121Oryzias_latipes_hsok
ENSFHEG00000001768polr2a9498.009ENSOMEG00000010713polr2a10098.009Oryzias_melastigma
ENSFHEG00000001768polr2a9894.662ENSOGAG00000033608-8594.668Otolemur_garnettii
ENSFHEG00000001768polr2a8994.662ENSOARG00000013874-8594.668Ovis_aries
ENSFHEG00000001768polr2a9892.005ENSPPAG00000043734-8992.002Pan_paniscus
ENSFHEG00000001768polr2a9992.117ENSPTRG00000008691POLR2A9192.498Pan_troglodytes
ENSFHEG00000001768polr2a9893.979ENSPANG00000024099-9191.816Papio_anubis
ENSFHEG00000001768polr2a7995.656ENSPKIG00000005727polr2a8595.656Paramormyrops_kingsleyae
ENSFHEG00000001768polr2a9992.892ENSPSIG00000014006POLR2A10092.813Pelodiscus_sinensis
ENSFHEG00000001768polr2a10097.567ENSPMGG00000019734polr2a9997.567Periophthalmus_magnuspinnatus
ENSFHEG00000001768polr2a9894.662ENSPEMG00000012521Polr2a9192.498Peromyscus_maniculatus_bairdii
ENSFHEG00000001768polr2a8894.417ENSPCIG00000028851-8294.417Phascolarctos_cinereus
ENSFHEG00000001768polr2a9999.472ENSPFOG00000007890polr2a9999.472Poecilia_formosa
ENSFHEG00000001768polr2a9999.472ENSPLAG00000007399polr2a9999.472Poecilia_latipinna
ENSFHEG00000001768polr2a9999.472ENSPMEG00000002071polr2a9999.472Poecilia_mexicana
ENSFHEG00000001768polr2a10099.269ENSPREG00000013122polr2a9999.269Poecilia_reticulata
ENSFHEG00000001768polr2a9594.662ENSPPYG00000007924-8294.668Pongo_abelii
ENSFHEG00000001768polr2a9094.737ENSPCAG00000006951-7794.737Procavia_capensis
ENSFHEG00000001768polr2a9893.358ENSPCOG00000025260-9192.498Propithecus_coquereli
ENSFHEG00000001768polr2a9894.351ENSPVAG00000005069-8594.358Pteropus_vampyrus
ENSFHEG00000001768polr2a10097.756ENSPNYG00000022340polr2a9997.756Pundamilia_nyererei
ENSFHEG00000001768polr2a10097.808ENSPNAG00000011237polr2a9997.808Pygocentrus_nattereri
ENSFHEG00000001768polr2a9894.600ENSRNOG00000028834Polr2a8594.606Rattus_norvegicus
ENSFHEG00000001768polr2a9892.117ENSRBIG00000002471-8692.498Rhinopithecus_bieti
ENSFHEG00000001768polr2a9494.662ENSRROG00000029583-9193.800Rhinopithecus_roxellana
ENSFHEG00000001768polr2a8549.787YDL140CRPO219876.712Saccharomyces_cerevisiae
ENSFHEG00000001768polr2a9894.662ENSSBOG00000000808-9192.498Saimiri_boliviensis_boliviensis
ENSFHEG00000001768polr2a9494.413ENSSHAG00000002858-8494.420Sarcophilus_harrisii
ENSFHEG00000001768polr2a10097.547ENSSFOG00015023275polr2a9997.547Scleropages_formosus
ENSFHEG00000001768polr2a9497.519ENSSMAG00000009137polr2a8597.519Scophthalmus_maximus
ENSFHEG00000001768polr2a10098.434ENSSDUG00000020466polr2a9998.434Seriola_dumerili
ENSFHEG00000001768polr2a10098.382ENSSLDG00000020613polr2a9998.382Seriola_lalandi_dorsalis
ENSFHEG00000001768polr2a9890.191ENSSARG00000005875-9991.016Sorex_araneus
ENSFHEG00000001768polr2a10098.451ENSSPAG00000016741polr2a9498.451Stegastes_partitus
ENSFHEG00000001768polr2a9993.731ENSSSCG00000028278-8593.738Sus_scrofa
ENSFHEG00000001768polr2a9992.250ENSTRUG00000012320polr2a8192.250Takifugu_rubripes
ENSFHEG00000001768polr2a9996.526ENSTNIG00000010136polr2a10096.526Tetraodon_nigroviridis
ENSFHEG00000001768polr2a7494.744ENSTBEG00000013294-5894.744Tupaia_belangeri
ENSFHEG00000001768polr2a9892.986ENSTTRG00000014273-8592.994Tursiops_truncatus
ENSFHEG00000001768polr2a9091.703ENSUAMG00000014866-9991.713Ursus_americanus
ENSFHEG00000001768polr2a9192.146ENSUMAG00000015732-9189.385Ursus_maritimus
ENSFHEG00000001768polr2a6598.370ENSVPAG00000008842-7698.370Vicugna_pacos
ENSFHEG00000001768polr2a9594.600ENSVVUG00000027878-8994.606Vulpes_vulpes
ENSFHEG00000001768polr2a9594.021ENSXETG00000012465polr2a8594.029Xenopus_tropicalis
ENSFHEG00000001768polr2a9895.921ENSXCOG00000001804polr2a9996.472Xiphophorus_couchianus
ENSFHEG00000001768polr2a10099.217ENSXMAG00000015687polr2a9999.217Xiphophorus_maculatus

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