EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSFHEG00000002233 (Gene tree)
Gene ID: -
Gene Symbol: zgc:171482
Alias: -
Full Name: zinc finger matrin-type protein 4-like
Gene Type: protein_coding
Species: Fundulus_heteroclitus
Status: putative
Strand: Plus strand
Length: 99117 bases
Position: chrKN811547.1:1821510-1920626
Accession: 105938763
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSFHEP00000001479	zf-met	PF12874.7	2.4e-27	1	4
ENSFHEP00000001479	zf-met	PF12874.7	2.4e-27	2	4
ENSFHEP00000001479	zf-met	PF12874.7	2.4e-27	3	4
ENSFHEP00000001479	zf-met	PF12874.7	2.4e-27	4	4
ENSFHEP00000001485	zf-met	PF12874.7	7.5e-15	1	2
ENSFHEP00000001485	zf-met	PF12874.7	7.5e-15	2	2
ENSFHEP00000001479	zf-C2H2_jaz	PF12171.8	1.1e-20	1	2
ENSFHEP00000001479	zf-C2H2_jaz	PF12171.8	1.1e-20	2	2
ENSFHEP00000001485	zf-C2H2_jaz	PF12171.8	2.8e-10	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSFHET00000013800	-	620	-	ENSFHEP00000001485	140 (aa)	-	-
ENSFHET00000013814	-	684	XM_012880649	ENSFHEP00000001479	227 (aa)	XP_012736103	-

Gene Model

Click here to download ENSFHEG00000002233's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSFHEG00000002233's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSFHEG00000002233	zgc:171482	100	64.317	ENSFHEG00000022872	zmat4b	100	64.317
ENSFHEG00000002233	zgc:171482	96	43.779	ENSFHEG00000020328	znf346	70	43.779

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSFHEG00000002233	zgc:171482	100	88.546	ENSAPOG00000019970	zgc:171482	100	88.546	Acanthochromis_polyacanthus
ENSFHEG00000002233	zgc:171482	86	96.667	ENSACIG00000021512	zgc:171482	90	96.667	Amphilophus_citrinellus
ENSFHEG00000002233	zgc:171482	96	91.791	ENSAOCG00000000751	zgc:171482	96	91.791	Amphiprion_ocellaris
ENSFHEG00000002233	zgc:171482	91	96.094	ENSAPEG00000014154	zgc:171482	92	96.094	Amphiprion_percula
ENSFHEG00000002233	zgc:171482	90	97.391	ENSATEG00000001371	zgc:171482	100	87.225	Anabas_testudineus
ENSFHEG00000002233	zgc:171482	90	95.238	ENSACLG00000010511	zgc:171482	88	95.238	Astatotilapia_calliptera
ENSFHEG00000002233	zgc:171482	95	92.793	ENSAMXG00000002299	zgc:171482	97	86.822	Astyanax_mexicanus
ENSFHEG00000002233	zgc:171482	100	91.935	ENSCSEG00000006509	zgc:171482	78	95.000	Cynoglossus_semilaevis
ENSFHEG00000002233	zgc:171482	100	88.987	ENSCVAG00000013606	zgc:171482	100	88.987	Cyprinodon_variegatus
ENSFHEG00000002233	zgc:171482	99	81.416	ENSDARG00000074415	zgc:171482	99	93.333	Danio_rerio
ENSFHEG00000002233	zgc:171482	81	73.684	ENSELUG00000017517	-	60	85.393	Esox_lucius
ENSFHEG00000002233	zgc:171482	92	89.922	ENSELUG00000021817	zgc:171482	93	89.922	Esox_lucius
ENSFHEG00000002233	zgc:171482	100	84.141	ENSGMOG00000010508	zgc:171482	100	84.141	Gadus_morhua
ENSFHEG00000002233	zgc:171482	100	95.082	ENSGAFG00000009398	zgc:171482	78	98.333	Gambusia_affinis
ENSFHEG00000002233	zgc:171482	100	86.207	ENSGACG00000007680	zgc:171482	100	85.043	Gasterosteus_aculeatus
ENSFHEG00000002233	zgc:171482	91	95.312	ENSHBUG00000023289	zgc:171482	96	95.312	Haplochromis_burtoni
ENSFHEG00000002233	zgc:171482	89	88.889	ENSHCOG00000018086	zgc:171482	94	88.889	Hippocampus_comes
ENSFHEG00000002233	zgc:171482	92	86.822	ENSIPUG00000000361	zgc:171482	85	93.162	Ictalurus_punctatus
ENSFHEG00000002233	zgc:171482	89	96.000	ENSKMAG00000005077	zgc:171482	76	96.000	Kryptolebias_marmoratus
ENSFHEG00000002233	zgc:171482	92	93.798	ENSLBEG00000023823	zgc:171482	92	93.798	Labrus_bergylta
ENSFHEG00000002233	zgc:171482	100	81.498	ENSLOCG00000008863	zgc:171482	97	82.018	Lepisosteus_oculatus
ENSFHEG00000002233	zgc:171482	99	95.868	ENSMAMG00000001031	zgc:171482	82	96.154	Mastacembelus_armatus
ENSFHEG00000002233	zgc:171482	100	85.463	ENSMZEG00005027721	zgc:171482	100	85.463	Maylandia_zebra
ENSFHEG00000002233	zgc:171482	94	93.893	ENSMMOG00000010523	zgc:171482	100	93.893	Mola_mola
ENSFHEG00000002233	zgc:171482	100	87.336	ENSMALG00000017883	zgc:171482	100	86.522	Monopterus_albus
ENSFHEG00000002233	zgc:171482	81	99.115	ENSNBRG00000021035	zgc:171482	84	99.115	Neolamprologus_brichardi
ENSFHEG00000002233	zgc:171482	99	87.611	ENSONIG00000018365	zgc:171482	98	87.611	Oreochromis_niloticus
ENSFHEG00000002233	zgc:171482	95	98.291	ENSORLG00000007607	zgc:171482	92	95.385	Oryzias_latipes
ENSFHEG00000002233	zgc:171482	95	93.220	ENSORLG00020003563	zgc:171482	92	94.615	Oryzias_latipes_hni
ENSFHEG00000002233	zgc:171482	95	98.291	ENSORLG00015008552	zgc:171482	92	95.385	Oryzias_latipes_hsok
ENSFHEG00000002233	zgc:171482	93	95.385	ENSOMEG00000003526	zgc:171482	92	95.385	Oryzias_melastigma
ENSFHEG00000002233	zgc:171482	86	94.783	ENSPKIG00000015911	-	84	94.783	Paramormyrops_kingsleyae
ENSFHEG00000002233	zgc:171482	94	72.917	ENSPKIG00000016244	zgc:171482	98	78.832	Paramormyrops_kingsleyae
ENSFHEG00000002233	zgc:171482	89	94.400	ENSPMGG00000020230	zgc:171482	100	82.845	Periophthalmus_magnuspinnatus
ENSFHEG00000002233	zgc:171482	91	97.638	ENSPFOG00000001974	zgc:171482	88	97.638	Poecilia_formosa
ENSFHEG00000002233	zgc:171482	100	87.665	ENSPLAG00000003327	zgc:171482	100	87.665	Poecilia_latipinna
ENSFHEG00000002233	zgc:171482	99	95.041	ENSPMEG00000004988	zgc:171482	100	82.456	Poecilia_mexicana
ENSFHEG00000002233	zgc:171482	98	93.431	ENSPREG00000019241	zgc:171482	99	93.431	Poecilia_reticulata
ENSFHEG00000002233	zgc:171482	90	95.238	ENSPNYG00000007773	zgc:171482	88	95.238	Pundamilia_nyererei
ENSFHEG00000002233	zgc:171482	99	81.223	ENSPNAG00000007619	zgc:171482	97	81.223	Pygocentrus_nattereri
ENSFHEG00000002233	zgc:171482	82	89.565	ENSSFOG00015021238	zgc:171482	78	89.565	Scleropages_formosus
ENSFHEG00000002233	zgc:171482	90	83.333	ENSSFOG00015016149	zgc:171482	96	85.833	Scleropages_formosus
ENSFHEG00000002233	zgc:171482	91	95.312	ENSSMAG00000002715	zgc:171482	82	95.312	Scophthalmus_maximus
ENSFHEG00000002233	zgc:171482	90	96.825	ENSSDUG00000008773	zgc:171482	89	96.825	Seriola_dumerili
ENSFHEG00000002233	zgc:171482	90	96.825	ENSSLDG00000019510	zgc:171482	89	96.825	Seriola_lalandi_dorsalis
ENSFHEG00000002233	zgc:171482	89	96.774	ENSSPAG00000013724	zgc:171482	98	96.774	Stegastes_partitus
ENSFHEG00000002233	zgc:171482	90	92.063	ENSTRUG00000005705	zgc:171482	74	92.063	Takifugu_rubripes
ENSFHEG00000002233	zgc:171482	100	77.193	ENSTNIG00000008679	zgc:171482	100	77.193	Tetraodon_nigroviridis
ENSFHEG00000002233	zgc:171482	78	76.786	ENSXETG00000013525	zmat4	76	76.786	Xenopus_tropicalis
ENSFHEG00000002233	zgc:171482	100	86.179	ENSXMAG00000002641	zgc:171482	78	89.256	Xiphophorus_maculatus