EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSFHEG00000002419 (Gene tree)
Gene ID: 105928701
Gene Symbol: rnaseh2c
Alias: fc08g11|im:5617510|si:dkey-147f20.5|wu:fc08g11
Full Name: ribonuclease H2 subunit C
Gene Type: protein_coding
Species: Fundulus_heteroclitus
Status: putative
Strand: Minus strand
Length: 8916 bases
Position: chrKN811327.1:2287202-2296117
Accession: 105928701
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSFHEP00000022199	RNase_H2_suC	PF08615.11	8.2e-19	1	1
ENSFHEP00000022196	RNase_H2_suC	PF08615.11	1.7e-18	1	1
ENSFHEP00000022213	RNase_H2_suC	PF08615.11	2e-18	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSFHET00000013513	-	871	XM_012866123	ENSFHEP00000022199	137 (aa)	XP_012721577	-
ENSFHET00000013510	-	868	-	ENSFHEP00000022196	141 (aa)	-	-
ENSFHET00000013500	-	728	XM_021318303	ENSFHEP00000022213	146 (aa)	XP_021173978	-

Gene Model

Click here to download ENSFHEG00000002419's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSFHEG00000002419's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSFHEG00000002419	rnaseh2c	95	83.846	ENSAPOG00000012901	rnaseh2c	95	83.846	Acanthochromis_polyacanthus
ENSFHEG00000002419	rnaseh2c	96	78.626	ENSACIG00000022433	rnaseh2c	96	77.692	Amphilophus_citrinellus
ENSFHEG00000002419	rnaseh2c	95	83.077	ENSAOCG00000016855	rnaseh2c	96	83.077	Amphiprion_ocellaris
ENSFHEG00000002419	rnaseh2c	95	83.846	ENSAPEG00000009850	rnaseh2c	96	83.846	Amphiprion_percula
ENSFHEG00000002419	rnaseh2c	95	80.769	ENSATEG00000014395	rnaseh2c	96	80.769	Anabas_testudineus
ENSFHEG00000002419	rnaseh2c	95	78.462	ENSACLG00000016950	rnaseh2c	96	78.462	Astatotilapia_calliptera
ENSFHEG00000002419	rnaseh2c	95	69.231	ENSAMXG00000001210	rnaseh2c	95	70.312	Astyanax_mexicanus
ENSFHEG00000002419	rnaseh2c	95	53.846	ENSCPBG00000023408	-	94	53.846	Chrysemys_picta_bellii
ENSFHEG00000002419	rnaseh2c	95	77.692	ENSCSEG00000005808	rnaseh2c	94	78.462	Cynoglossus_semilaevis
ENSFHEG00000002419	rnaseh2c	95	92.308	ENSCVAG00000006337	rnaseh2c	96	92.308	Cyprinodon_variegatus
ENSFHEG00000002419	rnaseh2c	95	66.154	ENSDARG00000089637	rnaseh2c	95	66.154	Danio_rerio
ENSFHEG00000002419	rnaseh2c	80	53.043	ENSEBUG00000014939	rnaseh2c	74	53.043	Eptatretus_burgeri
ENSFHEG00000002419	rnaseh2c	94	68.217	ENSELUG00000007345	rnaseh2c	95	67.692	Esox_lucius
ENSFHEG00000002419	rnaseh2c	65	71.910	ENSGMOG00000008727	rnaseh2c	99	71.910	Gadus_morhua
ENSFHEG00000002419	rnaseh2c	95	93.846	ENSGAFG00000016755	rnaseh2c	79	94.574	Gambusia_affinis
ENSFHEG00000002419	rnaseh2c	95	53.846	ENSGAGG00000008193	-	94	53.846	Gopherus_agassizii
ENSFHEG00000002419	rnaseh2c	95	79.231	ENSHBUG00000012806	rnaseh2c	96	79.231	Haplochromis_burtoni
ENSFHEG00000002419	rnaseh2c	98	70.149	ENSHCOG00000007177	rnaseh2c	96	71.538	Hippocampus_comes
ENSFHEG00000002419	rnaseh2c	98	64.179	ENSIPUG00000018044	rnaseh2c	94	65.625	Ictalurus_punctatus
ENSFHEG00000002419	rnaseh2c	95	80.769	ENSKMAG00000004184	rnaseh2c	96	80.769	Kryptolebias_marmoratus
ENSFHEG00000002419	rnaseh2c	95	80.153	ENSLBEG00000005742	rnaseh2c	96	79.389	Labrus_bergylta
ENSFHEG00000002419	rnaseh2c	91	58.065	ENSLACG00000010120	-	89	57.937	Latimeria_chalumnae
ENSFHEG00000002419	rnaseh2c	95	76.154	ENSMAMG00000021610	rnaseh2c	96	76.154	Mastacembelus_armatus
ENSFHEG00000002419	rnaseh2c	95	79.231	ENSMZEG00005004796	rnaseh2c	96	79.231	Maylandia_zebra
ENSFHEG00000002419	rnaseh2c	99	77.778	ENSMMOG00000002869	rnaseh2c	96	78.462	Mola_mola
ENSFHEG00000002419	rnaseh2c	95	81.679	ENSMALG00000012198	rnaseh2c	96	81.679	Monopterus_albus
ENSFHEG00000002419	rnaseh2c	95	79.231	ENSNBRG00000001462	rnaseh2c	96	79.231	Neolamprologus_brichardi
ENSFHEG00000002419	rnaseh2c	95	78.462	ENSONIG00000005338	rnaseh2c	95	78.462	Oreochromis_niloticus
ENSFHEG00000002419	rnaseh2c	95	74.615	ENSORLG00000023473	rnaseh2c	96	74.615	Oryzias_latipes
ENSFHEG00000002419	rnaseh2c	95	74.615	ENSORLG00020019053	rnaseh2c	87	75.194	Oryzias_latipes_hni
ENSFHEG00000002419	rnaseh2c	95	76.923	ENSORLG00015017067	rnaseh2c	87	77.519	Oryzias_latipes_hsok
ENSFHEG00000002419	rnaseh2c	95	73.846	ENSOMEG00000018607	rnaseh2c	96	73.846	Oryzias_melastigma
ENSFHEG00000002419	rnaseh2c	96	58.779	ENSPKIG00000019331	rnaseh2c	96	57.692	Paramormyrops_kingsleyae
ENSFHEG00000002419	rnaseh2c	95	90.000	ENSPFOG00000009415	rnaseh2c	96	90.000	Poecilia_formosa
ENSFHEG00000002419	rnaseh2c	95	90.769	ENSPLAG00000023330	rnaseh2c	96	90.769	Poecilia_latipinna
ENSFHEG00000002419	rnaseh2c	95	90.000	ENSPMEG00000003696	rnaseh2c	96	90.000	Poecilia_mexicana
ENSFHEG00000002419	rnaseh2c	95	83.688	ENSPREG00000015384	rnaseh2c	70	83.688	Poecilia_reticulata
ENSFHEG00000002419	rnaseh2c	95	79.231	ENSPNYG00000014766	rnaseh2c	96	79.231	Pundamilia_nyererei
ENSFHEG00000002419	rnaseh2c	96	67.939	ENSPNAG00000019111	rnaseh2c	96	66.923	Pygocentrus_nattereri
ENSFHEG00000002419	rnaseh2c	96	68.702	ENSSFOG00015005760	rnaseh2c	98	68.702	Scleropages_formosus
ENSFHEG00000002419	rnaseh2c	98	78.358	ENSSMAG00000017738	rnaseh2c	96	79.231	Scophthalmus_maximus
ENSFHEG00000002419	rnaseh2c	95	80.769	ENSSDUG00000017285	rnaseh2c	96	80.769	Seriola_dumerili
ENSFHEG00000002419	rnaseh2c	95	82.308	ENSSLDG00000016030	rnaseh2c	96	82.308	Seriola_lalandi_dorsalis
ENSFHEG00000002419	rnaseh2c	91	53.543	ENSSPUG00000000842	-	86	52.308	Sphenodon_punctatus
ENSFHEG00000002419	rnaseh2c	95	78.462	ENSSPAG00000007536	rnaseh2c	96	78.462	Stegastes_partitus
ENSFHEG00000002419	rnaseh2c	96	70.992	ENSTRUG00000021845	rnaseh2c	96	70.000	Takifugu_rubripes
ENSFHEG00000002419	rnaseh2c	95	75.385	ENSTNIG00000000431	rnaseh2c	96	75.385	Tetraodon_nigroviridis
ENSFHEG00000002419	rnaseh2c	94	46.512	ENSXETG00000032466	-	94	46.512	Xenopus_tropicalis
ENSFHEG00000002419	rnaseh2c	95	91.538	ENSXCOG00000001611	rnaseh2c	96	91.538	Xiphophorus_couchianus
ENSFHEG00000002419	rnaseh2c	95	94.615	ENSXMAG00000003147	rnaseh2c	79	95.349	Xiphophorus_maculatus