EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSFHEG00000002502 (Gene tree)
Gene ID: 105919610
Gene Symbol: si:dkey-13a21.4
Alias: zgc:110195
Full Name: ras-related protein rab7-like
Gene Type: protein_coding
Species: Fundulus_heteroclitus
Status: putative
Strand: Minus strand
Length: 4972 bases
Position: chrKN805982.1:108128-113099
Accession: 105919610
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSFHEP00000001736	MMR_HSR1	PF01926.23	1.2e-05	1	1
ENSFHEP00000001744	MMR_HSR1	PF01926.23	1.9e-05	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSFHET00000013371	-	3644	XM_021311988	ENSFHEP00000001736	205 (aa)	XP_021167663	UPI000644F156
ENSFHET00000013366	-	3735	-	ENSFHEP00000001744	254 (aa)	-	A0A146NY92

Gene Model

Click here to download ENSFHEG00000002502's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSFHEG00000002502's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSFHEG00000002502	si:dkey-13a21.4	97	35.610	ENSFHEG00000011483	zgc:101559	86	35.610
ENSFHEG00000002502	si:dkey-13a21.4	61	30.380	ENSFHEG00000004875	si:ch73-116o1.2	85	31.111
ENSFHEG00000002502	si:dkey-13a21.4	97	32.195	ENSFHEG00000022524	rab6bb	96	32.195
ENSFHEG00000002502	si:dkey-13a21.4	88	36.066	ENSFHEG00000013691	rab34a	69	36.066
ENSFHEG00000002502	si:dkey-13a21.4	92	33.000	ENSFHEG00000014087	RAB15	99	31.925
ENSFHEG00000002502	si:dkey-13a21.4	87	36.872	ENSFHEG00000023069	rab23	75	35.135
ENSFHEG00000002502	si:dkey-13a21.4	79	34.356	ENSFHEG00000015268	-	72	34.356
ENSFHEG00000002502	si:dkey-13a21.4	77	36.646	ENSFHEG00000012041	si:dkey-34d22.5	71	36.646
ENSFHEG00000002502	si:dkey-13a21.4	79	36.196	ENSFHEG00000014070	rab5aa	74	36.196
ENSFHEG00000002502	si:dkey-13a21.4	72	38.667	ENSFHEG00000006820	rab33ba	61	38.667
ENSFHEG00000002502	si:dkey-13a21.4	85	33.708	ENSFHEG00000006551	rab36	64	33.708
ENSFHEG00000002502	si:dkey-13a21.4	80	50.000	ENSFHEG00000021111	rab9a	82	50.000
ENSFHEG00000002502	si:dkey-13a21.4	66	32.353	ENSFHEG00000010055	hrasb	76	34.014
ENSFHEG00000002502	si:dkey-13a21.4	97	33.333	ENSFHEG00000015996	RAB41	94	33.333
ENSFHEG00000002502	si:dkey-13a21.4	75	34.839	ENSFHEG00000015993	RAB29	76	34.839
ENSFHEG00000002502	si:dkey-13a21.4	80	35.758	ENSFHEG00000014414	-	80	35.758
ENSFHEG00000002502	si:dkey-13a21.4	77	30.061	ENSFHEG00000018971	nkiras1	82	30.061
ENSFHEG00000002502	si:dkey-13a21.4	77	32.500	ENSFHEG00000022642	rab11ba	71	32.500
ENSFHEG00000002502	si:dkey-13a21.4	77	36.478	ENSFHEG00000002885	-	89	33.500
ENSFHEG00000002502	si:dkey-13a21.4	79	35.976	ENSFHEG00000004319	rab12	64	36.646
ENSFHEG00000002502	si:dkey-13a21.4	73	32.450	ENSFHEG00000008212	rhebl1	79	32.450
ENSFHEG00000002502	si:dkey-13a21.4	83	40.351	ENSFHEG00000004891	rab35b	89	39.130
ENSFHEG00000002502	si:dkey-13a21.4	77	33.544	ENSFHEG00000019668	rab11a	72	33.544
ENSFHEG00000002502	si:dkey-13a21.4	81	35.119	ENSFHEG00000001296	rab2a	77	35.119
ENSFHEG00000002502	si:dkey-13a21.4	96	49.254	ENSFHEG00000005588	RAB7A	86	49.254
ENSFHEG00000002502	si:dkey-13a21.4	77	33.125	ENSFHEG00000000832	rab11al	74	33.125
ENSFHEG00000002502	si:dkey-13a21.4	79	35.583	ENSFHEG00000012117	rab5c	72	35.583
ENSFHEG00000002502	si:dkey-13a21.4	81	49.701	ENSFHEG00000018764	RAB9A	78	49.701
ENSFHEG00000002502	si:dkey-13a21.4	77	36.250	ENSFHEG00000020877	RAB39B	74	36.250
ENSFHEG00000002502	si:dkey-13a21.4	73	40.268	ENSFHEG00000020035	rab18b	71	40.268
ENSFHEG00000002502	si:dkey-13a21.4	79	37.037	ENSFHEG00000021221	rab13	86	37.037
ENSFHEG00000002502	si:dkey-13a21.4	77	38.994	ENSFHEG00000012702	rab22a	80	38.994
ENSFHEG00000002502	si:dkey-13a21.4	86	34.637	ENSFHEG00000004532	rab34b	71	35.326
ENSFHEG00000002502	si:dkey-13a21.4	77	30.380	ENSFHEG00000016504	si:cabz01085950.1	76	30.380
ENSFHEG00000002502	si:dkey-13a21.4	77	30.189	ENSFHEG00000003385	rasd4	79	31.977
ENSFHEG00000002502	si:dkey-13a21.4	77	32.500	ENSFHEG00000018353	rab11bb	71	32.500
ENSFHEG00000002502	si:dkey-13a21.4	77	32.911	ENSFHEG00000014186	rab25a	73	32.911
ENSFHEG00000002502	si:dkey-13a21.4	76	30.120	ENSFHEG00000019684	rasl11a	63	30.120
ENSFHEG00000002502	si:dkey-13a21.4	76	30.675	ENSFHEG00000019106	rasl11b	64	30.675
ENSFHEG00000002502	si:dkey-13a21.4	80	34.337	ENSFHEG00000001477	-	64	34.337
ENSFHEG00000002502	si:dkey-13a21.4	77	32.500	ENSFHEG00000022676	-	71	32.500
ENSFHEG00000002502	si:dkey-13a21.4	85	32.571	ENSFHEG00000000695	-	80	32.571
ENSFHEG00000002502	si:dkey-13a21.4	86	52.809	ENSFHEG00000007101	RAB7A	86	52.809
ENSFHEG00000002502	si:dkey-13a21.4	86	34.831	ENSFHEG00000009378	rab15	82	34.831
ENSFHEG00000002502	si:dkey-13a21.4	81	33.929	ENSFHEG00000003018	rab25b	84	33.929
ENSFHEG00000002502	si:dkey-13a21.4	85	32.571	ENSFHEG00000010509	rab4a	83	32.222
ENSFHEG00000002502	si:dkey-13a21.4	68	32.857	ENSFHEG00000018450	RAB14	69	32.857
ENSFHEG00000002502	si:dkey-13a21.4	77	37.736	ENSFHEG00000013106	rab42a	72	37.736
ENSFHEG00000002502	si:dkey-13a21.4	73	38.926	ENSFHEG00000019455	rab18a	72	38.926
ENSFHEG00000002502	si:dkey-13a21.4	79	37.037	ENSFHEG00000022176	zgc:171927	74	37.037
ENSFHEG00000002502	si:dkey-13a21.4	73	31.788	ENSFHEG00000003799	rheb	80	31.788
ENSFHEG00000002502	si:dkey-13a21.4	85	39.205	ENSFHEG00000013918	rab30	85	39.205
ENSFHEG00000002502	si:dkey-13a21.4	80	35.152	ENSFHEG00000022985	rab1ab	79	35.152
ENSFHEG00000002502	si:dkey-13a21.4	80	33.939	ENSFHEG00000014924	rab1ba	80	33.939
ENSFHEG00000002502	si:dkey-13a21.4	81	50.000	ENSFHEG00000009417	rab9b	76	50.000
ENSFHEG00000002502	si:dkey-13a21.4	71	30.345	ENSFHEG00000009108	kras	81	32.051
ENSFHEG00000002502	si:dkey-13a21.4	95	36.765	ENSFHEG00000022141	rab33a	83	36.765

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSFHEG00000002502	si:dkey-13a21.4	100	83.902	ENSACIG00000011024	si:dkey-13a21.4	100	83.902	Amphilophus_citrinellus
ENSFHEG00000002502	si:dkey-13a21.4	100	82.927	ENSAOCG00000020491	si:dkey-13a21.4	100	82.927	Amphiprion_ocellaris
ENSFHEG00000002502	si:dkey-13a21.4	100	82.927	ENSAPEG00000023338	si:dkey-13a21.4	92	82.927	Amphiprion_percula
ENSFHEG00000002502	si:dkey-13a21.4	100	81.951	ENSATEG00000014958	si:dkey-13a21.4	100	81.951	Anabas_testudineus
ENSFHEG00000002502	si:dkey-13a21.4	95	51.795	ENSACAG00000012345	-	97	51.795	Anolis_carolinensis
ENSFHEG00000002502	si:dkey-13a21.4	100	82.927	ENSACLG00000021109	si:dkey-13a21.4	99	82.927	Astatotilapia_calliptera
ENSFHEG00000002502	si:dkey-13a21.4	100	52.358	ENSAMXG00000032663	si:dkey-13a21.4	97	52.358	Astyanax_mexicanus
ENSFHEG00000002502	si:dkey-13a21.4	87	54.144	WBGene00004271	rab-7	99	49.275	Caenorhabditis_elegans
ENSFHEG00000002502	si:dkey-13a21.4	100	91.707	ENSCVAG00000001150	si:dkey-13a21.4	100	91.707	Cyprinodon_variegatus
ENSFHEG00000002502	si:dkey-13a21.4	95	63.590	ENSDARG00000026098	si:dkey-13a21.4	95	63.590	Danio_rerio
ENSFHEG00000002502	si:dkey-13a21.4	90	50.267	ENSDNOG00000043559	-	98	47.805	Dasypus_novemcinctus
ENSFHEG00000002502	si:dkey-13a21.4	100	86.829	ENSGAFG00000020102	si:dkey-13a21.4	100	86.829	Gambusia_affinis
ENSFHEG00000002502	si:dkey-13a21.4	100	83.415	ENSHBUG00000014023	si:dkey-13a21.4	99	83.415	Haplochromis_burtoni
ENSFHEG00000002502	si:dkey-13a21.4	86	81.921	ENSKMAG00000021039	si:dkey-13a21.4	79	77.202	Kryptolebias_marmoratus
ENSFHEG00000002502	si:dkey-13a21.4	100	80.976	ENSLBEG00000018180	si:dkey-13a21.4	100	80.976	Labrus_bergylta
ENSFHEG00000002502	si:dkey-13a21.4	100	59.903	ENSLOCG00000014749	si:dkey-13a21.4	100	59.903	Lepisosteus_oculatus
ENSFHEG00000002502	si:dkey-13a21.4	88	54.444	ENSLAFG00000028984	-	86	54.444	Loxodonta_africana
ENSFHEG00000002502	si:dkey-13a21.4	100	81.951	ENSMAMG00000021095	si:dkey-13a21.4	100	81.951	Mastacembelus_armatus
ENSFHEG00000002502	si:dkey-13a21.4	100	82.927	ENSMZEG00005010220	si:dkey-13a21.4	99	82.927	Maylandia_zebra
ENSFHEG00000002502	si:dkey-13a21.4	99	82.843	ENSNBRG00000023214	si:dkey-13a21.4	99	82.843	Neolamprologus_brichardi
ENSFHEG00000002502	si:dkey-13a21.4	100	82.927	ENSONIG00000020296	si:dkey-13a21.4	100	82.927	Oreochromis_niloticus
ENSFHEG00000002502	si:dkey-13a21.4	100	79.512	ENSORLG00000025098	si:dkey-13a21.4	100	79.512	Oryzias_latipes
ENSFHEG00000002502	si:dkey-13a21.4	100	79.512	ENSORLG00020019465	si:dkey-13a21.4	100	79.512	Oryzias_latipes_hni
ENSFHEG00000002502	si:dkey-13a21.4	100	80.000	ENSORLG00015015121	si:dkey-13a21.4	100	80.000	Oryzias_latipes_hsok
ENSFHEG00000002502	si:dkey-13a21.4	95	63.452	ENSPKIG00000008691	si:dkey-13a21.4	96	63.452	Paramormyrops_kingsleyae
ENSFHEG00000002502	si:dkey-13a21.4	92	78.307	ENSPMGG00000023170	si:dkey-13a21.4	95	76.119	Periophthalmus_magnuspinnatus
ENSFHEG00000002502	si:dkey-13a21.4	100	88.293	ENSPFOG00000015409	si:dkey-13a21.4	100	88.293	Poecilia_formosa
ENSFHEG00000002502	si:dkey-13a21.4	100	88.293	ENSPLAG00000019688	si:dkey-13a21.4	100	88.293	Poecilia_latipinna
ENSFHEG00000002502	si:dkey-13a21.4	100	88.293	ENSPMEG00000019159	si:dkey-13a21.4	100	88.293	Poecilia_mexicana
ENSFHEG00000002502	si:dkey-13a21.4	100	86.341	ENSPREG00000022241	si:dkey-13a21.4	100	86.341	Poecilia_reticulata
ENSFHEG00000002502	si:dkey-13a21.4	100	82.927	ENSPNYG00000018613	si:dkey-13a21.4	99	82.927	Pundamilia_nyererei
ENSFHEG00000002502	si:dkey-13a21.4	95	44.279	YML001W	YPT7	96	44.279	Saccharomyces_cerevisiae
ENSFHEG00000002502	si:dkey-13a21.4	95	62.245	ENSSFOG00015009566	si:dkey-13a21.4	96	62.245	Scleropages_formosus
ENSFHEG00000002502	si:dkey-13a21.4	100	79.126	ENSSMAG00000013945	si:dkey-13a21.4	100	79.126	Scophthalmus_maximus
ENSFHEG00000002502	si:dkey-13a21.4	100	83.902	ENSSDUG00000019738	si:dkey-13a21.4	100	83.902	Seriola_dumerili
ENSFHEG00000002502	si:dkey-13a21.4	100	83.902	ENSSLDG00000011597	si:dkey-13a21.4	100	83.902	Seriola_lalandi_dorsalis
ENSFHEG00000002502	si:dkey-13a21.4	95	53.333	ENSXETG00000014257	mgc75872	97	53.333	Xenopus_tropicalis