EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSFHEG00000002553 (Gene tree)
Gene ID: -
Gene Symbol: blm
Alias: -
Full Name: BLM RecQ like helicase
Gene Type: protein_coding
Species: Fundulus_heteroclitus
Status: putative
Strand: Plus strand
Length: 17521 bases
Position: chrKN811387.1:287492-305012
Accession: ZDB-GENE-070702-5
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSFHEP00000022279	HRDC	PF00570.23	8.2e-14	1	1
ENSFHEP00000001801	HRDC	PF00570.23	8.4e-14	1	1
ENSFHEP00000022279	BDHCT	PF08072.11	8.5e-18	1	1
ENSFHEP00000001801	BDHCT	PF08072.11	8.8e-18	1	1
ENSFHEP00000022279	DEAD	PF00270.29	7.5e-17	1	1
ENSFHEP00000001801	DEAD	PF00270.29	7.8e-17	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSFHET00000013275	-	7557	-	ENSFHEP00000001801	1405 (aa)	-	A0A146ZYQ1
ENSFHET00000013286	-	7467	-	ENSFHEP00000022279	1375 (aa)	-	UPI00064512BC

Gene Model

Click here to download ENSFHEG00000002553's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSFHEG00000002553's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSFHEG00000002553	blm	57	64.796	ENSG00000197299	BLM	69	61.432	Homo_sapiens
ENSFHEG00000002553	blm	100	71.299	ENSAPOG00000017966	blm	100	71.409	Acanthochromis_polyacanthus
ENSFHEG00000002553	blm	100	70.886	ENSACIG00000023762	blm	100	70.675	Amphilophus_citrinellus
ENSFHEG00000002553	blm	100	71.235	ENSAOCG00000003318	blm	100	71.663	Amphiprion_ocellaris
ENSFHEG00000002553	blm	100	71.209	ENSAPEG00000018105	blm	100	71.698	Amphiprion_percula
ENSFHEG00000002553	blm	99	69.617	ENSATEG00000006421	blm	100	70.077	Anabas_testudineus
ENSFHEG00000002553	blm	81	51.351	ENSAPLG00000006878	BLM	69	62.262	Anas_platyrhynchos
ENSFHEG00000002553	blm	57	65.355	ENSACAG00000014275	BLM	55	64.892	Anolis_carolinensis
ENSFHEG00000002553	blm	61	60.652	ENSANAG00000038415	BLM	56	64.757	Aotus_nancymaae
ENSFHEG00000002553	blm	100	70.857	ENSACLG00000020354	blm	100	70.646	Astatotilapia_calliptera
ENSFHEG00000002553	blm	99	55.997	ENSAMXG00000016970	blm	99	56.546	Astyanax_mexicanus
ENSFHEG00000002553	blm	58	71.795	ENSBTAG00000020301	BLM	66	69.556	Bos_taurus
ENSFHEG00000002553	blm	75	53.625	ENSCJAG00000009803	BLM	57	66.373	Callithrix_jacchus
ENSFHEG00000002553	blm	99	45.106	ENSCAFG00000012385	BLM	99	45.430	Canis_familiaris
ENSFHEG00000002553	blm	99	45.168	ENSCAFG00020016111	BLM	87	66.712	Canis_lupus_dingo
ENSFHEG00000002553	blm	60	62.382	ENSCHIG00000010329	BLM	61	60.809	Capra_hircus
ENSFHEG00000002553	blm	60	65.057	ENSTSYG00000012368	BLM	62	66.081	Carlito_syrichta
ENSFHEG00000002553	blm	63	69.527	ENSCAPG00000017976	BLM	77	69.527	Cavia_aperea
ENSFHEG00000002553	blm	60	61.429	ENSCPOG00000001761	BLM	59	61.429	Cavia_porcellus
ENSFHEG00000002553	blm	57	64.758	ENSCCAG00000023069	BLM	57	66.197	Cebus_capucinus
ENSFHEG00000002553	blm	57	64.668	ENSCATG00000040609	BLM	75	76.393	Cercocebus_atys
ENSFHEG00000002553	blm	99	46.101	ENSCLAG00000012111	BLM	99	45.224	Chinchilla_lanigera
ENSFHEG00000002553	blm	60	64.541	ENSCSAG00000017040	BLM	65	61.040	Chlorocebus_sabaeus
ENSFHEG00000002553	blm	73	53.306	ENSCHOG00000006255	BLM	56	53.306	Choloepus_hoffmanni
ENSFHEG00000002553	blm	86	49.068	ENSCPBG00000025000	BLM	97	51.724	Chrysemys_picta_bellii
ENSFHEG00000002553	blm	63	59.444	ENSCANG00000034808	BLM	51	61.915	Colobus_angolensis_palliatus
ENSFHEG00000002553	blm	75	54.751	ENSCGRG00001024897	Blm	59	62.843	Cricetulus_griseus_chok1gshd
ENSFHEG00000002553	blm	95	64.366	ENSCSEG00000013483	blm	99	64.891	Cynoglossus_semilaevis
ENSFHEG00000002553	blm	77	78.541	ENSCVAG00000017583	blm	97	75.635	Cyprinodon_variegatus
ENSFHEG00000002553	blm	99	56.814	ENSDARG00000077089	blm	100	56.305	Danio_rerio
ENSFHEG00000002553	blm	59	63.209	ENSDORG00000011033	Blm	82	61.583	Dipodomys_ordii
ENSFHEG00000002553	blm	53	41.809	FBgn0002906	Blm	56	39.302	Drosophila_melanogaster
ENSFHEG00000002553	blm	60	59.286	ENSEASG00005006727	BLM	60	58.488	Equus_asinus_asinus
ENSFHEG00000002553	blm	60	61.967	ENSECAG00000011405	BLM	60	60.950	Equus_caballus
ENSFHEG00000002553	blm	60	61.782	ENSEEUG00000001434	BLM	61	61.430	Erinaceus_europaeus
ENSFHEG00000002553	blm	99	57.940	ENSELUG00000019098	blm	99	57.324	Esox_lucius
ENSFHEG00000002553	blm	57	64.930	ENSFCAG00000006087	BLM	51	72.802	Felis_catus
ENSFHEG00000002553	blm	94	59.074	ENSFDAG00000012658	BLM	55	66.355	Fukomys_damarensis
ENSFHEG00000002553	blm	99	58.985	ENSGMOG00000016431	blm	98	69.873	Gadus_morhua
ENSFHEG00000002553	blm	100	79.251	ENSGAFG00000001117	blm	100	79.971	Gambusia_affinis
ENSFHEG00000002553	blm	99	67.129	ENSGACG00000010863	blm	100	86.742	Gasterosteus_aculeatus
ENSFHEG00000002553	blm	66	53.734	ENSGAGG00000005383	BLM	95	53.711	Gopherus_agassizii
ENSFHEG00000002553	blm	75	53.088	ENSGGOG00000007710	BLM	75	76.066	Gorilla_gorilla
ENSFHEG00000002553	blm	100	70.516	ENSHBUG00000015943	blm	100	70.681	Haplochromis_burtoni
ENSFHEG00000002553	blm	76	53.430	ENSHGLG00000013231	BLM	82	64.259	Heterocephalus_glaber_female
ENSFHEG00000002553	blm	75	68.840	ENSHCOG00000011455	blm	100	69.032	Hippocampus_comes
ENSFHEG00000002553	blm	75	63.188	ENSIPUG00000000529	blm	77	70.694	Ictalurus_punctatus
ENSFHEG00000002553	blm	63	65.146	ENSSTOG00000005000	BLM	64	64.803	Ictidomys_tridecemlineatus
ENSFHEG00000002553	blm	75	49.906	ENSJJAG00000016322	Blm	99	48.885	Jaculus_jaculus
ENSFHEG00000002553	blm	100	75.126	ENSKMAG00000016608	blm	100	74.623	Kryptolebias_marmoratus
ENSFHEG00000002553	blm	60	78.469	ENSLBEG00000018729	blm	97	78.110	Labrus_bergylta
ENSFHEG00000002553	blm	66	66.229	ENSLACG00000006490	BLM	67	64.598	Latimeria_chalumnae
ENSFHEG00000002553	blm	99	51.839	ENSLOCG00000014302	blm	90	69.357	Lepisosteus_oculatus
ENSFHEG00000002553	blm	57	64.796	ENSMFAG00000042982	BLM	75	76.393	Macaca_fascicularis
ENSFHEG00000002553	blm	57	64.668	ENSMMUG00000019526	BLM	75	76.393	Macaca_mulatta
ENSFHEG00000002553	blm	57	64.541	ENSMNEG00000031251	BLM	75	76.066	Macaca_nemestrina
ENSFHEG00000002553	blm	57	60.969	ENSMLEG00000032934	BLM	54	60.969	Mandrillus_leucophaeus
ENSFHEG00000002553	blm	100	70.288	ENSMAMG00000008726	blm	100	70.043	Mastacembelus_armatus
ENSFHEG00000002553	blm	100	69.923	ENSMZEG00005022323	blm	100	70.063	Maylandia_zebra
ENSFHEG00000002553	blm	87	62.515	ENSMAUG00000008953	Blm	59	62.515	Mesocricetus_auratus
ENSFHEG00000002553	blm	87	51.941	ENSMICG00000034442	BLM	59	72.951	Microcebus_murinus
ENSFHEG00000002553	blm	87	63.913	ENSMOCG00000016367	Blm	58	64.156	Microtus_ochrogaster
ENSFHEG00000002553	blm	100	68.786	ENSMMOG00000006959	blm	100	68.643	Mola_mola
ENSFHEG00000002553	blm	80	50.847	ENSMODG00000019449	BLM	57	62.081	Monodelphis_domestica
ENSFHEG00000002553	blm	100	71.235	ENSMALG00000007323	blm	100	71.184	Monopterus_albus
ENSFHEG00000002553	blm	60	62.127	MGP_CAROLIEiJ_G0029907	Blm	59	62.127	Mus_caroli
ENSFHEG00000002553	blm	57	64.910	ENSMUSG00000030528	Blm	54	64.910	Mus_musculus
ENSFHEG00000002553	blm	60	62.633	MGP_PahariEiJ_G0013129	Blm	59	62.633	Mus_pahari
ENSFHEG00000002553	blm	57	65.013	MGP_SPRETEiJ_G0031009	Blm	55	65.013	Mus_spretus
ENSFHEG00000002553	blm	86	51.245	ENSMLUG00000014697	BLM	70	60.710	Myotis_lucifugus
ENSFHEG00000002553	blm	59	62.696	ENSNGAG00000001275	Blm	59	61.871	Nannospalax_galili
ENSFHEG00000002553	blm	100	69.361	ENSNBRG00000019702	blm	100	69.642	Neolamprologus_brichardi
ENSFHEG00000002553	blm	75	51.610	ENSNLEG00000012087	BLM	82	57.652	Nomascus_leucogenys
ENSFHEG00000002553	blm	81	47.304	ENSMEUG00000007253	BLM	59	56.667	Notamacropus_eugenii
ENSFHEG00000002553	blm	52	65.193	ENSOPRG00000011667	BLM	51	64.617	Ochotona_princeps
ENSFHEG00000002553	blm	75	51.287	ENSODEG00000015373	BLM	99	50.190	Octodon_degus
ENSFHEG00000002553	blm	100	67.354	ENSONIG00000015193	blm	100	67.906	Oreochromis_niloticus
ENSFHEG00000002553	blm	55	65.083	ENSOANG00000009316	-	100	64.691	Ornithorhynchus_anatinus
ENSFHEG00000002553	blm	84	64.962	ENSOCUG00000013969	BLM	70	64.834	Oryctolagus_cuniculus
ENSFHEG00000002553	blm	100	73.042	ENSORLG00000008110	blm	100	73.042	Oryzias_latipes
ENSFHEG00000002553	blm	100	72.819	ENSORLG00020004812	blm	100	72.830	Oryzias_latipes_hni
ENSFHEG00000002553	blm	100	73.042	ENSORLG00015018640	blm	100	75.121	Oryzias_latipes_hsok
ENSFHEG00000002553	blm	100	72.590	ENSOMEG00000023545	blm	100	72.426	Oryzias_melastigma
ENSFHEG00000002553	blm	88	62.397	ENSOARG00000012875	BLM	89	60.970	Ovis_aries
ENSFHEG00000002553	blm	75	53.137	ENSPPAG00000032173	BLM	57	66.549	Pan_paniscus
ENSFHEG00000002553	blm	57	64.803	ENSPPRG00000002471	BLM	51	72.802	Panthera_pardus
ENSFHEG00000002553	blm	57	64.168	ENSPTIG00000016168	BLM	50	72.561	Panthera_tigris_altaica
ENSFHEG00000002553	blm	75	52.860	ENSPTRG00000007460	BLM	57	66.197	Pan_troglodytes
ENSFHEG00000002553	blm	57	64.668	ENSPANG00000018572	BLM	75	76.393	Papio_anubis
ENSFHEG00000002553	blm	99	54.736	ENSPKIG00000008954	blm	99	54.847	Paramormyrops_kingsleyae
ENSFHEG00000002553	blm	71	68.592	ENSPMGG00000006629	blm	100	68.896	Periophthalmus_magnuspinnatus
ENSFHEG00000002553	blm	60	62.619	ENSPEMG00000017348	Blm	59	62.619	Peromyscus_maniculatus_bairdii
ENSFHEG00000002553	blm	99	44.174	ENSPCIG00000006609	BLM	87	60.419	Phascolarctos_cinereus
ENSFHEG00000002553	blm	100	79.035	ENSPFOG00000005059	blm	100	79.598	Poecilia_formosa
ENSFHEG00000002553	blm	100	79.035	ENSPLAG00000017344	blm	100	79.755	Poecilia_latipinna
ENSFHEG00000002553	blm	100	79.126	ENSPMEG00000000321	blm	100	79.677	Poecilia_mexicana
ENSFHEG00000002553	blm	100	78.929	ENSPREG00000007715	blm	100	79.507	Poecilia_reticulata
ENSFHEG00000002553	blm	57	63.776	ENSPPYG00000006784	BLM	79	50.513	Pongo_abelii
ENSFHEG00000002553	blm	60	59.976	ENSPCAG00000008960	BLM	61	59.148	Procavia_capensis
ENSFHEG00000002553	blm	83	58.140	ENSPCOG00000000439	BLM	81	58.140	Propithecus_coquereli
ENSFHEG00000002553	blm	70	76.744	ENSPVAG00000011642	BLM	50	76.744	Pteropus_vampyrus
ENSFHEG00000002553	blm	100	63.305	ENSPNYG00000010956	blm	100	63.121	Pundamilia_nyererei
ENSFHEG00000002553	blm	100	57.917	ENSPNAG00000011714	blm	100	57.876	Pygocentrus_nattereri
ENSFHEG00000002553	blm	99	45.722	ENSRNOG00000011213	Blm	60	61.979	Rattus_norvegicus
ENSFHEG00000002553	blm	83	51.971	ENSRBIG00000029656	BLM	91	67.663	Rhinopithecus_bieti
ENSFHEG00000002553	blm	79	51.127	ENSRROG00000037871	BLM	91	67.663	Rhinopithecus_roxellana
ENSFHEG00000002553	blm	51	67.701	ENSSBOG00000030957	BLM	57	66.021	Saimiri_boliviensis_boliviensis
ENSFHEG00000002553	blm	99	44.393	ENSSHAG00000007988	BLM	81	51.997	Sarcophilus_harrisii
ENSFHEG00000002553	blm	76	63.198	ENSSFOG00015015462	blm	80	61.589	Scleropages_formosus
ENSFHEG00000002553	blm	100	69.550	ENSSMAG00000001120	blm	100	69.099	Scophthalmus_maximus
ENSFHEG00000002553	blm	100	71.306	ENSSDUG00000010955	blm	100	71.378	Seriola_dumerili
ENSFHEG00000002553	blm	100	70.735	ENSSLDG00000000634	blm	100	70.664	Seriola_lalandi_dorsalis
ENSFHEG00000002553	blm	60	60.332	ENSSARG00000006398	BLM	62	59.949	Sorex_araneus
ENSFHEG00000002553	blm	63	57.989	ENSSPUG00000000013	BLM	76	59.332	Sphenodon_punctatus
ENSFHEG00000002553	blm	99	72.740	ENSSPAG00000013999	blm	99	72.740	Stegastes_partitus
ENSFHEG00000002553	blm	61	65.527	ENSSSCG00000001816	BLM	62	65.116	Sus_scrofa
ENSFHEG00000002553	blm	80	47.079	ENSTGUG00000009959	-	72	55.136	Taeniopygia_guttata
ENSFHEG00000002553	blm	99	64.573	ENSTRUG00000019860	blm	99	65.363	Takifugu_rubripes
ENSFHEG00000002553	blm	99	64.466	ENSTNIG00000019246	blm	99	64.607	Tetraodon_nigroviridis
ENSFHEG00000002553	blm	56	65.816	ENSTTRG00000016386	BLM	55	65.128	Tursiops_truncatus
ENSFHEG00000002553	blm	76	73.156	ENSUMAG00000009105	BLM	94	68.163	Ursus_maritimus
ENSFHEG00000002553	blm	80	50.216	ENSVPAG00000000085	BLM	59	59.150	Vicugna_pacos
ENSFHEG00000002553	blm	83	63.896	ENSVVUG00000006402	BLM	85	63.760	Vulpes_vulpes
ENSFHEG00000002553	blm	100	77.135	ENSXCOG00000020227	blm	100	77.982	Xiphophorus_couchianus
ENSFHEG00000002553	blm	100	79.760	ENSXMAG00000002951	blm	100	79.760	Xiphophorus_maculatus