EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSFHEG00000002861 (Gene tree)
Gene ID: 105934589
Gene Symbol: prpf38b
Alias: wu:fc43b05|zgc:63496
Full Name: pre-mRNA processing factor 38B
Gene Type: protein_coding
Species: Fundulus_heteroclitus
Status: putative
Strand: Minus strand
Length: 7429 bases
Position: chrKN811434.1:271306-278734
Accession: 105934589
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSFHEP00000002077	PRP38	PF03371.15	2e-55	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSFHET00000012824	-	2481	XM_012874665	ENSFHEP00000002077	462 (aa)	XP_012730119	UPI000645166E

Gene Model

Click here to download ENSFHEG00000002861's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSFHEG00000002861's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSFHEG00000002861	prpf38b	62	93.056	ENSAPOG00000012791	-	100	85.075	Acanthochromis_polyacanthus
ENSFHEG00000002861	prpf38b	62	93.056	ENSAPOG00000005297	prpf38b	100	85.075	Acanthochromis_polyacanthus
ENSFHEG00000002861	prpf38b	62	93.056	ENSAOCG00000012675	prpf38b	91	85.288	Amphiprion_ocellaris
ENSFHEG00000002861	prpf38b	62	92.708	ENSAPEG00000010974	prpf38b	94	95.122	Amphiprion_percula
ENSFHEG00000002861	prpf38b	98	85.683	ENSACLG00000001712	prpf38b	98	85.683	Astatotilapia_calliptera
ENSFHEG00000002861	prpf38b	97	65.988	ENSDARG00000053101	prpf38b	95	89.634	Danio_rerio
ENSFHEG00000002861	prpf38b	100	79.579	ENSGACG00000015154	prpf38b	100	76.891	Gasterosteus_aculeatus
ENSFHEG00000002861	prpf38b	98	85.903	ENSHBUG00000022496	prpf38b	98	85.903	Haplochromis_burtoni
ENSFHEG00000002861	prpf38b	95	67.325	ENSIPUG00000014942	prpf38b	96	65.714	Ictalurus_punctatus
ENSFHEG00000002861	prpf38b	100	81.585	ENSLBEG00000024500	prpf38b	89	93.902	Labrus_bergylta
ENSFHEG00000002861	prpf38b	100	84.222	ENSMAMG00000010641	prpf38b	100	82.942	Mastacembelus_armatus
ENSFHEG00000002861	prpf38b	98	85.683	ENSMZEG00005025536	prpf38b	98	85.683	Maylandia_zebra
ENSFHEG00000002861	prpf38b	98	85.903	ENSPNYG00000007625	prpf38b	98	85.903	Pundamilia_nyererei
ENSFHEG00000002861	prpf38b	62	93.750	ENSSPAG00000023160	-	100	85.043	Stegastes_partitus