EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSFHEG00000002868 (Gene tree)
Gene ID: -
Gene Symbol: rtca
Alias: cb158|rtcd1|sb:cb158|wu:fc62c03
Full Name: RNA 3'-terminal phosphate cyclase
Gene Type: protein_coding
Species: Fundulus_heteroclitus
Status: putative
Strand: Plus strand
Length: 10179 bases
Position: chrKN811603.1:71870-82048
Accession: ZDB-GENE-030131-9687
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSFHEP00000001998	RTC	PF01137.21	7e-31	1	1
ENSFHEP00000002011	RTC	PF01137.21	9.9e-31	1	1
ENSFHEP00000022428	RTC	PF01137.21	1.2e-30	1	1
ENSFHEP00000022428	RTC_insert	PF05189.13	2.6e-23	1	1
ENSFHEP00000001998	RTC_insert	PF05189.13	3.3e-23	1	1
ENSFHEP00000002011	RTC_insert	PF05189.13	3.4e-23	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSFHET00000012932	-	783	-	ENSFHEP00000002011	260 (aa)	-	-
ENSFHET00000012907	-	696	-	ENSFHEP00000022428	231 (aa)	-	-
ENSFHET00000012949	-	798	-	ENSFHEP00000001998	265 (aa)	-	-

Gene Model

Click here to download ENSFHEG00000002868's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSFHEG00000002868's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSFHEG00000002868	rtca	90	71.154	ENSG00000137996	RTCA	72	60.687	Homo_sapiens
ENSFHEG00000002868	rtca	91	84.977	ENSAPOG00000001345	rtca	70	75.875	Acanthochromis_polyacanthus
ENSFHEG00000002868	rtca	96	69.469	ENSAMEG00000008855	RTCA	80	71.163	Ailuropoda_melanoleuca
ENSFHEG00000002868	rtca	92	82.791	ENSACIG00000019643	rtca	58	85.849	Amphilophus_citrinellus
ENSFHEG00000002868	rtca	91	85.446	ENSAOCG00000014979	rtca	70	76.265	Amphiprion_ocellaris
ENSFHEG00000002868	rtca	91	85.446	ENSAPEG00000006945	rtca	70	76.265	Amphiprion_percula
ENSFHEG00000002868	rtca	92	86.047	ENSATEG00000006315	rtca	71	77.432	Anabas_testudineus
ENSFHEG00000002868	rtca	93	64.840	ENSAPLG00000015430	RTCA	58	67.980	Anas_platyrhynchos
ENSFHEG00000002868	rtca	97	67.982	ENSANAG00000025446	RTCA	72	61.832	Aotus_nancymaae
ENSFHEG00000002868	rtca	92	83.256	ENSACLG00000020770	rtca	55	88.500	Astatotilapia_calliptera
ENSFHEG00000002868	rtca	93	79.817	ENSAMXG00000043271	rtca	55	85.500	Astyanax_mexicanus
ENSFHEG00000002868	rtca	96	69.027	ENSBTAG00000006321	RTCA	72	62.595	Bos_taurus
ENSFHEG00000002868	rtca	80	33.679	WBGene00022852	ZK1127.5	54	31.100	Caenorhabditis_elegans
ENSFHEG00000002868	rtca	96	68.142	ENSCJAG00000003398	RTCA	72	61.450	Callithrix_jacchus
ENSFHEG00000002868	rtca	96	69.027	ENSCHIG00000018937	RTCA	72	62.595	Capra_hircus
ENSFHEG00000002868	rtca	90	70.192	ENSTSYG00000011305	RTCA	72	60.687	Carlito_syrichta
ENSFHEG00000002868	rtca	96	66.814	ENSCCAG00000021844	RTCA	74	61.943	Cebus_capucinus
ENSFHEG00000002868	rtca	96	68.142	ENSCATG00000019364	RTCA	70	70.233	Cercocebus_atys
ENSFHEG00000002868	rtca	92	69.585	ENSCLAG00000006125	RTCA	62	74.872	Chinchilla_lanigera
ENSFHEG00000002868	rtca	96	68.142	ENSCSAG00000001509	RTCA	68	62.249	Chlorocebus_sabaeus
ENSFHEG00000002868	rtca	96	67.257	ENSCHOG00000005211	RTCA	59	69.302	Choloepus_hoffmanni
ENSFHEG00000002868	rtca	92	64.516	ENSCPBG00000026658	RTCA	57	69.036	Chrysemys_picta_bellii
ENSFHEG00000002868	rtca	93	52.752	ENSCING00000007875	-	55	55.721	Ciona_intestinalis
ENSFHEG00000002868	rtca	93	53.211	ENSCSAVG00000007269	-	55	55.721	Ciona_savignyi
ENSFHEG00000002868	rtca	96	68.142	ENSCANG00000040106	RTCA	59	70.233	Colobus_angolensis_palliatus
ENSFHEG00000002868	rtca	90	70.476	ENSCGRG00001013163	Rtca	68	70.233	Cricetulus_griseus_chok1gshd
ENSFHEG00000002868	rtca	90	84.211	ENSCSEG00000000530	rtca	67	74.797	Cynoglossus_semilaevis
ENSFHEG00000002868	rtca	93	88.426	ENSCVAG00000021809	rtca	63	92.166	Cyprinodon_variegatus
ENSFHEG00000002868	rtca	93	78.802	ENSDARG00000002215	rtca	56	82.673	Danio_rerio
ENSFHEG00000002868	rtca	96	68.142	ENSDNOG00000000456	RTCA	59	70.233	Dasypus_novemcinctus
ENSFHEG00000002868	rtca	93	68.182	ENSDORG00000005448	Rtca	72	60.687	Dipodomys_ordii
ENSFHEG00000002868	rtca	89	38.350	FBgn0025630	Rtca	57	38.350	Drosophila_melanogaster
ENSFHEG00000002868	rtca	78	32.447	ENSEBUG00000016621	-	50	32.447	Eptatretus_burgeri
ENSFHEG00000002868	rtca	90	43.096	ENSEBUG00000008556	rtca	60	43.096	Eptatretus_burgeri
ENSFHEG00000002868	rtca	96	68.584	ENSEASG00005015926	RTCA	55	74.000	Equus_asinus_asinus
ENSFHEG00000002868	rtca	96	68.584	ENSECAG00000019831	RTCA	55	74.000	Equus_caballus
ENSFHEG00000002868	rtca	85	65.482	ENSEEUG00000001165	RTCA	58	64.824	Erinaceus_europaeus
ENSFHEG00000002868	rtca	93	75.229	ENSELUG00000003741	rtca	56	79.208	Esox_lucius
ENSFHEG00000002868	rtca	90	72.596	ENSFCAG00000024460	RTCA	70	62.500	Felis_catus
ENSFHEG00000002868	rtca	92	65.728	ENSFALG00000002443	RTCA	54	69.000	Ficedula_albicollis
ENSFHEG00000002868	rtca	92	52.273	ENSFDAG00000016084	-	70	46.970	Fukomys_damarensis
ENSFHEG00000002868	rtca	96	67.257	ENSFDAG00000012070	-	68	61.446	Fukomys_damarensis
ENSFHEG00000002868	rtca	77	30.319	ENSGMOG00000004677	rcl1	50	30.319	Gadus_morhua
ENSFHEG00000002868	rtca	90	79.621	ENSGMOG00000013264	rtca	59	78.037	Gadus_morhua
ENSFHEG00000002868	rtca	92	64.516	ENSGALG00000005277	RTCA	55	67.662	Gallus_gallus
ENSFHEG00000002868	rtca	92	83.721	ENSGAFG00000011853	rtca	70	75.486	Gambusia_affinis
ENSFHEG00000002868	rtca	87	89.109	ENSGACG00000013497	rtca	68	78.049	Gasterosteus_aculeatus
ENSFHEG00000002868	rtca	67	67.742	ENSGAGG00000023306	RTCA	53	67.742	Gopherus_agassizii
ENSFHEG00000002868	rtca	90	69.712	ENSGGOG00000044018	-	69	59.073	Gorilla_gorilla
ENSFHEG00000002868	rtca	90	70.673	ENSGGOG00000009546	-	70	69.302	Gorilla_gorilla
ENSFHEG00000002868	rtca	92	83.256	ENSHBUG00000002114	rtca	55	87.624	Haplochromis_burtoni
ENSFHEG00000002868	rtca	96	67.699	ENSHGLG00000002617	RTCA	69	60.618	Heterocephalus_glaber_female
ENSFHEG00000002868	rtca	96	67.699	ENSHGLG00100006056	RTCA	69	60.618	Heterocephalus_glaber_male
ENSFHEG00000002868	rtca	94	70.968	ENSHCOG00000020628	rtca	50	74.752	Hippocampus_comes
ENSFHEG00000002868	rtca	93	79.817	ENSIPUG00000024803	rtca	54	86.735	Ictalurus_punctatus
ENSFHEG00000002868	rtca	88	63.415	ENSSTOG00000033099	-	55	62.679	Ictidomys_tridecemlineatus
ENSFHEG00000002868	rtca	90	71.635	ENSSTOG00000013528	-	73	62.903	Ictidomys_tridecemlineatus
ENSFHEG00000002868	rtca	89	53.883	ENSJJAG00000016178	Rtca	62	53.456	Jaculus_jaculus
ENSFHEG00000002868	rtca	92	86.977	ENSKMAG00000006651	rtca	58	90.521	Kryptolebias_marmoratus
ENSFHEG00000002868	rtca	92	81.395	ENSLBEG00000002448	-	80	73.930	Labrus_bergylta
ENSFHEG00000002868	rtca	92	81.395	ENSLBEG00000028971	rtca	71	73.930	Labrus_bergylta
ENSFHEG00000002868	rtca	97	63.274	ENSLACG00000013666	RTCA	56	67.488	Latimeria_chalumnae
ENSFHEG00000002868	rtca	97	70.925	ENSLOCG00000000093	rtca	55	77.612	Lepisosteus_oculatus
ENSFHEG00000002868	rtca	90	70.192	ENSLAFG00000001473	RTCA	55	72.500	Loxodonta_africana
ENSFHEG00000002868	rtca	96	68.142	ENSMFAG00000034132	RTCA	68	62.249	Macaca_fascicularis
ENSFHEG00000002868	rtca	96	68.142	ENSMMUG00000019105	RTCA	68	62.500	Macaca_mulatta
ENSFHEG00000002868	rtca	96	68.142	ENSMNEG00000037163	RTCA	70	70.233	Macaca_nemestrina
ENSFHEG00000002868	rtca	69	75.625	ENSMLEG00000042151	RTCA	54	75.625	Mandrillus_leucophaeus
ENSFHEG00000002868	rtca	97	83.556	ENSMAMG00000016536	rtca	71	77.821	Mastacembelus_armatus
ENSFHEG00000002868	rtca	92	83.256	ENSMZEG00005017945	rtca	55	88.500	Maylandia_zebra
ENSFHEG00000002868	rtca	93	64.384	ENSMGAG00000006892	RTCA	64	67.488	Meleagris_gallopavo
ENSFHEG00000002868	rtca	90	70.952	ENSMAUG00000008488	Rtca	72	61.450	Mesocricetus_auratus
ENSFHEG00000002868	rtca	96	68.584	ENSMICG00000008643	RTCA	70	70.698	Microcebus_murinus
ENSFHEG00000002868	rtca	90	69.524	ENSMOCG00000016660	Rtca	72	60.305	Microtus_ochrogaster
ENSFHEG00000002868	rtca	91	85.446	ENSMMOG00000007750	rtca	76	80.252	Mola_mola
ENSFHEG00000002868	rtca	90	69.048	ENSMODG00000003557	RTCA	57	69.378	Monodelphis_domestica
ENSFHEG00000002868	rtca	97	82.667	ENSMALG00000020844	rtca	71	77.432	Monopterus_albus
ENSFHEG00000002868	rtca	90	69.048	MGP_CAROLIEiJ_G0025565	Rtca	79	68.750	Mus_caroli
ENSFHEG00000002868	rtca	90	69.048	ENSMUSG00000000339	Rtca	79	68.750	Mus_musculus
ENSFHEG00000002868	rtca	90	69.048	MGP_PahariEiJ_G0027011	Rtca	79	68.750	Mus_pahari
ENSFHEG00000002868	rtca	90	69.048	MGP_SPRETEiJ_G0026515	Rtca	79	68.750	Mus_spretus
ENSFHEG00000002868	rtca	96	69.469	ENSMPUG00000012119	RTCA	72	61.832	Mustela_putorius_furo
ENSFHEG00000002868	rtca	96	65.044	ENSMLUG00000009922	RTCA	59	66.977	Myotis_lucifugus
ENSFHEG00000002868	rtca	77	30.319	ENSNGAG00000015327	Rcl1	50	30.319	Nannospalax_galili
ENSFHEG00000002868	rtca	93	67.273	ENSNGAG00000011540	Rtca	63	68.837	Nannospalax_galili
ENSFHEG00000002868	rtca	92	82.791	ENSNBRG00000003062	rtca	55	88.000	Neolamprologus_brichardi
ENSFHEG00000002868	rtca	90	70.673	ENSNLEG00000031426	RTCA	68	61.847	Nomascus_leucogenys
ENSFHEG00000002868	rtca	90	64.762	ENSOPRG00000012092	RTCA	57	64.651	Ochotona_princeps
ENSFHEG00000002868	rtca	96	68.142	ENSODEG00000006990	RTCA	59	70.233	Octodon_degus
ENSFHEG00000002868	rtca	92	82.326	ENSONIG00000007753	rtca	55	87.500	Oreochromis_niloticus
ENSFHEG00000002868	rtca	90	68.269	ENSOANG00000012055	RTCA	66	67.907	Ornithorhynchus_anatinus
ENSFHEG00000002868	rtca	90	71.154	ENSOCUG00000014247	RTCA	72	61.069	Oryctolagus_cuniculus
ENSFHEG00000002868	rtca	97	81.778	ENSORLG00000013605	rtca	58	91.500	Oryzias_latipes
ENSFHEG00000002868	rtca	97	82.222	ENSORLG00020001904	rtca	57	92.000	Oryzias_latipes_hni
ENSFHEG00000002868	rtca	97	82.222	ENSORLG00015021064	rtca	55	91.500	Oryzias_latipes_hsok
ENSFHEG00000002868	rtca	92	84.651	ENSOMEG00000000756	rtca	55	90.500	Oryzias_melastigma
ENSFHEG00000002868	rtca	90	72.115	ENSOGAG00000005627	RTCA	55	74.500	Otolemur_garnettii
ENSFHEG00000002868	rtca	96	68.584	ENSOARG00000018122	RTCA	82	62.214	Ovis_aries
ENSFHEG00000002868	rtca	90	70.192	ENSPPAG00000035119	RTCA	68	70.142	Pan_paniscus
ENSFHEG00000002868	rtca	90	72.596	ENSPPRG00000000350	RTCA	55	75.000	Panthera_pardus
ENSFHEG00000002868	rtca	90	72.115	ENSPTIG00000012816	RTCA	70	62.109	Panthera_tigris_altaica
ENSFHEG00000002868	rtca	90	70.673	ENSPTRG00000001004	RTCA	68	70.616	Pan_troglodytes
ENSFHEG00000002868	rtca	96	68.142	ENSPANG00000000346	RTCA	68	62.500	Papio_anubis
ENSFHEG00000002868	rtca	87	84.158	ENSPKIG00000001653	rtca	55	84.158	Paramormyrops_kingsleyae
ENSFHEG00000002868	rtca	92	64.977	ENSPSIG00000011408	RTCA	55	68.159	Pelodiscus_sinensis
ENSFHEG00000002868	rtca	90	70.476	ENSPEMG00000018582	Rtca	72	61.450	Peromyscus_maniculatus_bairdii
ENSFHEG00000002868	rtca	92	51.818	ENSPMAG00000009110	rtca	55	53.922	Petromyzon_marinus
ENSFHEG00000002868	rtca	90	69.524	ENSPCIG00000007684	RTCA	55	72.139	Phascolarctos_cinereus
ENSFHEG00000002868	rtca	92	84.186	ENSPFOG00000004824	rtca	70	75.875	Poecilia_formosa
ENSFHEG00000002868	rtca	92	84.186	ENSPLAG00000011753	rtca	70	75.875	Poecilia_latipinna
ENSFHEG00000002868	rtca	92	84.186	ENSPMEG00000020469	rtca	70	75.875	Poecilia_mexicana
ENSFHEG00000002868	rtca	92	85.116	ENSPREG00000001365	rtca	70	76.265	Poecilia_reticulata
ENSFHEG00000002868	rtca	90	71.154	ENSPPYG00000001115	RTCA	68	62.249	Pongo_abelii
ENSFHEG00000002868	rtca	96	64.159	ENSPCAG00000005076	RTCA	59	65.116	Procavia_capensis
ENSFHEG00000002868	rtca	96	69.027	ENSPCOG00000005603	RTCA	72	61.832	Propithecus_coquereli
ENSFHEG00000002868	rtca	96	68.142	ENSPVAG00000009478	RTCA	53	72.906	Pteropus_vampyrus
ENSFHEG00000002868	rtca	92	83.256	ENSPNYG00000004722	rtca	55	88.500	Pundamilia_nyererei
ENSFHEG00000002868	rtca	93	77.982	ENSPNAG00000022270	rtca	54	84.694	Pygocentrus_nattereri
ENSFHEG00000002868	rtca	90	68.095	ENSRNOG00000014575	Rtca	72	59.542	Rattus_norvegicus
ENSFHEG00000002868	rtca	96	67.699	ENSRBIG00000041180	RTCA	70	69.767	Rhinopithecus_bieti
ENSFHEG00000002868	rtca	96	67.699	ENSRROG00000024929	RTCA	59	69.767	Rhinopithecus_roxellana
ENSFHEG00000002868	rtca	96	67.699	ENSSBOG00000028626	RTCA	72	61.069	Saimiri_boliviensis_boliviensis
ENSFHEG00000002868	rtca	90	68.571	ENSSHAG00000001758	RTCA	67	61.538	Sarcophilus_harrisii
ENSFHEG00000002868	rtca	92	82.791	ENSSMAG00000014680	rtca	55	87.129	Scophthalmus_maximus
ENSFHEG00000002868	rtca	97	84.071	ENSSDUG00000015585	rtca	69	78.210	Seriola_dumerili
ENSFHEG00000002868	rtca	97	83.628	ENSSLDG00000018985	rtca	70	77.821	Seriola_lalandi_dorsalis
ENSFHEG00000002868	rtca	98	61.304	ENSSARG00000013993	RTCA	73	60.759	Sorex_araneus
ENSFHEG00000002868	rtca	61	61.644	ENSSPUG00000016255	-	81	68.254	Sphenodon_punctatus
ENSFHEG00000002868	rtca	92	83.721	ENSSPAG00000011938	rtca	70	75.486	Stegastes_partitus
ENSFHEG00000002868	rtca	96	68.142	ENSSSCG00000006865	RTCA	59	70.233	Sus_scrofa
ENSFHEG00000002868	rtca	92	66.359	ENSTGUG00000005154	RTCA	55	69.154	Taeniopygia_guttata
ENSFHEG00000002868	rtca	97	80.444	ENSTRUG00000008799	rtca	68	76.829	Takifugu_rubripes
ENSFHEG00000002868	rtca	97	78.667	ENSTNIG00000004725	rtca	68	75.203	Tetraodon_nigroviridis
ENSFHEG00000002868	rtca	96	68.584	ENSTTRG00000015327	RTCA	69	62.214	Tursiops_truncatus
ENSFHEG00000002868	rtca	86	74.000	ENSUAMG00000017265	RTCA	70	63.710	Ursus_americanus
ENSFHEG00000002868	rtca	96	69.027	ENSUMAG00000007881	RTCA	70	62.109	Ursus_maritimus
ENSFHEG00000002868	rtca	96	57.522	ENSVPAG00000001039	RTCA	66	52.823	Vicugna_pacos
ENSFHEG00000002868	rtca	84	53.535	ENSXETG00000031661	RTCA	50	56.593	Xenopus_tropicalis
ENSFHEG00000002868	rtca	92	63.721	ENSXCOG00000008002	rtca	69	58.755	Xiphophorus_couchianus
ENSFHEG00000002868	rtca	92	83.721	ENSXMAG00000005482	rtca	70	75.486	Xiphophorus_maculatus