EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSFHEG00000002936 (Gene tree)
Gene ID: 105933034
Gene Symbol: tnrc6c1
Alias: fj17e06|si:dkey-54k13.1|unm_sa1472|wu:fj17e06
Full Name: trinucleotide repeat-containing gene 6C protein-like
Gene Type: protein_coding
Species: Fundulus_heteroclitus
Status: putative
Strand: Minus strand
Length: 52640 bases
Position: chrKN811399.1:100005-152644
Accession: 105933034
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSFHEP00000002159	Ago_hook	PF10427.9	4.4e-07	1	1
ENSFHEP00000002146	Ago_hook	PF10427.9	5.5e-07	1	1
ENSFHEP00000002146	RRM_1	PF00076.22	0.00021	1	1
ENSFHEP00000022502	RRM_1	PF00076.22	0.00022	1	1
ENSFHEP00000002159	RRM_1	PF00076.22	0.00023	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSFHET00000012693	-	5831	XM_021321403	ENSFHEP00000002159	1877 (aa)	XP_021177078	UPI000B3A53F7
ENSFHET00000012707	-	5720	-	ENSFHEP00000022502	1840 (aa)	-	-
ENSFHET00000012713	-	5199	XM_021321404	ENSFHEP00000002146	1732 (aa)	XP_021177079	UPI000B3895E0

Gene Model

Click here to download ENSFHEG00000002936's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSFHEG00000002936's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSFHEG00000002936	tnrc6c1	99	52.821	ENSFHEG00000003901	tnrc6c2	98	52.598

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSFHEG00000002936	tnrc6c1	99	45.760	ENSG00000078687	TNRC6C	89	71.005	Homo_sapiens
ENSFHEG00000002936	tnrc6c1	100	83.832	ENSAPOG00000019749	tnrc6c1	99	86.085	Acanthochromis_polyacanthus
ENSFHEG00000002936	tnrc6c1	99	47.278	ENSAMEG00000013756	TNRC6C	95	65.842	Ailuropoda_melanoleuca
ENSFHEG00000002936	tnrc6c1	100	73.639	ENSACIG00000008075	tnrc6c1	99	74.531	Amphilophus_citrinellus
ENSFHEG00000002936	tnrc6c1	100	85.279	ENSAOCG00000023968	tnrc6c1	100	85.796	Amphiprion_ocellaris
ENSFHEG00000002936	tnrc6c1	100	85.279	ENSAPEG00000009020	tnrc6c1	100	85.796	Amphiprion_percula
ENSFHEG00000002936	tnrc6c1	99	46.752	ENSAPLG00000005456	TNRC6C	98	48.243	Anas_platyrhynchos
ENSFHEG00000002936	tnrc6c1	99	49.431	ENSACAG00000016198	TNRC6C	59	39.669	Anolis_carolinensis
ENSFHEG00000002936	tnrc6c1	99	45.812	ENSANAG00000021554	TNRC6C	89	70.511	Aotus_nancymaae
ENSFHEG00000002936	tnrc6c1	99	73.003	ENSACLG00000000424	tnrc6c1	99	73.874	Astatotilapia_calliptera
ENSFHEG00000002936	tnrc6c1	99	53.010	ENSBTAG00000018658	TNRC6C	99	44.998	Bos_taurus
ENSFHEG00000002936	tnrc6c1	99	45.713	ENSCJAG00000019431	TNRC6C	97	46.849	Callithrix_jacchus
ENSFHEG00000002936	tnrc6c1	99	48.158	ENSCAFG00000005224	TNRC6C	96	47.109	Canis_familiaris
ENSFHEG00000002936	tnrc6c1	99	46.584	ENSCAFG00020006661	TNRC6C	100	46.802	Canis_lupus_dingo
ENSFHEG00000002936	tnrc6c1	99	47.464	ENSCHIG00000026004	TNRC6C	94	50.948	Capra_hircus
ENSFHEG00000002936	tnrc6c1	92	50.726	ENSTSYG00000005403	TNRC6C	100	48.152	Carlito_syrichta
ENSFHEG00000002936	tnrc6c1	99	43.004	ENSCAPG00000007307	TNRC6C	71	47.675	Cavia_aperea
ENSFHEG00000002936	tnrc6c1	99	46.859	ENSCPOG00000000467	TNRC6C	78	51.771	Cavia_porcellus
ENSFHEG00000002936	tnrc6c1	99	48.924	ENSCCAG00000030524	TNRC6C	89	70.675	Cebus_capucinus
ENSFHEG00000002936	tnrc6c1	99	45.943	ENSCATG00000033135	TNRC6C	89	70.675	Cercocebus_atys
ENSFHEG00000002936	tnrc6c1	99	48.037	ENSCLAG00000011139	TNRC6C	71	52.696	Chinchilla_lanigera
ENSFHEG00000002936	tnrc6c1	99	48.287	ENSCSAG00000005167	TNRC6C	67	69.505	Chlorocebus_sabaeus
ENSFHEG00000002936	tnrc6c1	99	48.312	ENSCPBG00000027960	TNRC6C	100	47.963	Chrysemys_picta_bellii
ENSFHEG00000002936	tnrc6c1	99	45.891	ENSCANG00000041771	TNRC6C	89	70.675	Colobus_angolensis_palliatus
ENSFHEG00000002936	tnrc6c1	99	47.247	ENSCGRG00001022686	Tnrc6c	94	45.985	Cricetulus_griseus_chok1gshd
ENSFHEG00000002936	tnrc6c1	99	47.535	ENSCGRG00000018041	Tnrc6c	94	45.985	Cricetulus_griseus_crigri
ENSFHEG00000002936	tnrc6c1	99	74.942	ENSCSEG00000012744	tnrc6c1	100	74.849	Cynoglossus_semilaevis
ENSFHEG00000002936	tnrc6c1	93	72.841	ENSDARG00000076847	tnrc6c1	100	59.790	Danio_rerio
ENSFHEG00000002936	tnrc6c1	100	48.889	ENSDNOG00000003247	TNRC6C	94	70.233	Dasypus_novemcinctus
ENSFHEG00000002936	tnrc6c1	99	44.651	ENSDORG00000004558	Tnrc6c	94	44.316	Dipodomys_ordii
ENSFHEG00000002936	tnrc6c1	88	52.927	ENSETEG00000005527	TNRC6C	76	61.275	Echinops_telfairi
ENSFHEG00000002936	tnrc6c1	80	50.914	ENSEASG00005004799	TNRC6C	94	48.699	Equus_asinus_asinus
ENSFHEG00000002936	tnrc6c1	80	51.956	ENSECAG00000012486	TNRC6C	99	46.751	Equus_caballus
ENSFHEG00000002936	tnrc6c1	95	51.830	ENSEEUG00000010008	TNRC6C	88	62.541	Erinaceus_europaeus
ENSFHEG00000002936	tnrc6c1	99	45.788	ENSFCAG00000028358	TNRC6C	100	46.957	Felis_catus
ENSFHEG00000002936	tnrc6c1	92	49.534	ENSFALG00000000848	TNRC6C	94	49.548	Ficedula_albicollis
ENSFHEG00000002936	tnrc6c1	97	48.068	ENSFDAG00000010368	TNRC6C	78	51.801	Fukomys_damarensis
ENSFHEG00000002936	tnrc6c1	100	49.306	ENSGALG00000001725	TNRC6C	80	56.713	Gallus_gallus
ENSFHEG00000002936	tnrc6c1	99	93.006	ENSGAFG00000019019	tnrc6c1	100	92.875	Gambusia_affinis
ENSFHEG00000002936	tnrc6c1	100	73.319	ENSGACG00000012320	tnrc6c1	99	72.317	Gasterosteus_aculeatus
ENSFHEG00000002936	tnrc6c1	100	49.709	ENSGAGG00000022043	TNRC6C	100	49.101	Gopherus_agassizii
ENSFHEG00000002936	tnrc6c1	99	45.863	ENSGGOG00000011304	TNRC6C	99	46.080	Gorilla_gorilla
ENSFHEG00000002936	tnrc6c1	100	78.506	ENSHBUG00000010846	tnrc6c1	100	80.275	Haplochromis_burtoni
ENSFHEG00000002936	tnrc6c1	99	47.925	ENSHGLG00000004809	TNRC6C	93	51.935	Heterocephalus_glaber_female
ENSFHEG00000002936	tnrc6c1	99	46.202	ENSHGLG00100012597	TNRC6C	93	50.169	Heterocephalus_glaber_male
ENSFHEG00000002936	tnrc6c1	99	59.347	ENSIPUG00000000818	tnrc6c1	99	59.454	Ictalurus_punctatus
ENSFHEG00000002936	tnrc6c1	79	52.432	ENSSTOG00000009101	TNRC6C	99	51.657	Ictidomys_tridecemlineatus
ENSFHEG00000002936	tnrc6c1	99	46.985	ENSJJAG00000017055	Tnrc6c	96	45.623	Jaculus_jaculus
ENSFHEG00000002936	tnrc6c1	98	81.342	ENSKMAG00000021023	tnrc6c1	100	80.386	Kryptolebias_marmoratus
ENSFHEG00000002936	tnrc6c1	90	62.827	ENSLACG00000015283	TNRC6C	71	62.304	Latimeria_chalumnae
ENSFHEG00000002936	tnrc6c1	99	78.863	ENSLOCG00000013377	tnrc6c1	93	80.811	Lepisosteus_oculatus
ENSFHEG00000002936	tnrc6c1	99	48.162	ENSLAFG00000011122	TNRC6C	95	65.785	Loxodonta_africana
ENSFHEG00000002936	tnrc6c1	99	45.943	ENSMFAG00000043943	TNRC6C	89	70.675	Macaca_fascicularis
ENSFHEG00000002936	tnrc6c1	99	48.390	ENSMMUG00000011924	TNRC6C	89	70.675	Macaca_mulatta
ENSFHEG00000002936	tnrc6c1	99	46.719	ENSMNEG00000030405	TNRC6C	89	70.675	Macaca_nemestrina
ENSFHEG00000002936	tnrc6c1	99	45.943	ENSMLEG00000033436	TNRC6C	89	70.675	Mandrillus_leucophaeus
ENSFHEG00000002936	tnrc6c1	99	81.745	ENSMAMG00000023613	tnrc6c1	99	82.172	Mastacembelus_armatus
ENSFHEG00000002936	tnrc6c1	100	79.931	ENSMZEG00005010920	tnrc6c1	100	80.161	Maylandia_zebra
ENSFHEG00000002936	tnrc6c1	99	44.959	ENSMGAG00000003906	TNRC6C	98	44.632	Meleagris_gallopavo
ENSFHEG00000002936	tnrc6c1	92	48.517	ENSMAUG00000021618	Tnrc6c	94	46.920	Mesocricetus_auratus
ENSFHEG00000002936	tnrc6c1	99	46.587	ENSMICG00000003952	TNRC6C	95	66.770	Microcebus_murinus
ENSFHEG00000002936	tnrc6c1	99	46.736	ENSMOCG00000015879	Tnrc6c	99	47.594	Microtus_ochrogaster
ENSFHEG00000002936	tnrc6c1	94	76.891	ENSMMOG00000005203	tnrc6c1	100	78.589	Mola_mola
ENSFHEG00000002936	tnrc6c1	99	46.416	ENSMODG00000001785	TNRC6C	96	46.238	Monodelphis_domestica
ENSFHEG00000002936	tnrc6c1	99	46.553	MGP_CAROLIEiJ_G0017465	Tnrc6c	99	47.121	Mus_caroli
ENSFHEG00000002936	tnrc6c1	99	46.508	ENSMUSG00000025571	Tnrc6c	99	47.071	Mus_musculus
ENSFHEG00000002936	tnrc6c1	99	46.812	MGP_PahariEiJ_G0018593	Tnrc6c	99	47.302	Mus_pahari
ENSFHEG00000002936	tnrc6c1	99	46.353	MGP_SPRETEiJ_G0018309	Tnrc6c	99	46.934	Mus_spretus
ENSFHEG00000002936	tnrc6c1	99	47.819	ENSMPUG00000013348	TNRC6C	58	43.302	Mustela_putorius_furo
ENSFHEG00000002936	tnrc6c1	99	45.688	ENSMLUG00000014431	TNRC6C	94	65.008	Myotis_lucifugus
ENSFHEG00000002936	tnrc6c1	99	47.153	ENSNGAG00000012203	Tnrc6c	99	45.236	Nannospalax_galili
ENSFHEG00000002936	tnrc6c1	100	78.378	ENSNBRG00000005344	tnrc6c1	99	80.613	Neolamprologus_brichardi
ENSFHEG00000002936	tnrc6c1	99	44.375	ENSNLEG00000000047	TNRC6C	96	44.184	Nomascus_leucogenys
ENSFHEG00000002936	tnrc6c1	83	74.468	ENSMEUG00000005104	TNRC6C	92	75.401	Notamacropus_eugenii
ENSFHEG00000002936	tnrc6c1	94	48.644	ENSODEG00000012499	TNRC6C	75	66.096	Octodon_degus
ENSFHEG00000002936	tnrc6c1	94	79.365	ENSONIG00000002210	tnrc6c1	100	81.199	Oreochromis_niloticus
ENSFHEG00000002936	tnrc6c1	70	100.000	ENSOANG00000009758	-	68	100.000	Ornithorhynchus_anatinus
ENSFHEG00000002936	tnrc6c1	100	75.688	ENSORLG00000009837	tnrc6c1	100	84.672	Oryzias_latipes
ENSFHEG00000002936	tnrc6c1	100	77.351	ENSORLG00020016510	tnrc6c1	100	78.311	Oryzias_latipes_hni
ENSFHEG00000002936	tnrc6c1	78	74.063	ENSORLG00015000171	tnrc6c1	99	74.578	Oryzias_latipes_hsok
ENSFHEG00000002936	tnrc6c1	100	78.784	ENSOMEG00000000357	tnrc6c1	100	79.014	Oryzias_melastigma
ENSFHEG00000002936	tnrc6c1	92	49.301	ENSOGAG00000007197	TNRC6C	89	66.719	Otolemur_garnettii
ENSFHEG00000002936	tnrc6c1	95	46.521	ENSOARG00000006041	TNRC6C	99	46.950	Ovis_aries
ENSFHEG00000002936	tnrc6c1	99	45.812	ENSPPAG00000027160	TNRC6C	89	70.840	Pan_paniscus
ENSFHEG00000002936	tnrc6c1	99	45.883	ENSPPRG00000018881	TNRC6C	95	64.852	Panthera_pardus
ENSFHEG00000002936	tnrc6c1	85	55.319	ENSPTIG00000008791	TNRC6C	67	59.770	Panthera_tigris_altaica
ENSFHEG00000002936	tnrc6c1	99	45.863	ENSPTRG00000009699	TNRC6C	89	71.005	Pan_troglodytes
ENSFHEG00000002936	tnrc6c1	99	45.943	ENSPANG00000019994	TNRC6C	89	70.675	Papio_anubis
ENSFHEG00000002936	tnrc6c1	91	57.356	ENSPKIG00000005428	tnrc6c1	100	57.258	Paramormyrops_kingsleyae
ENSFHEG00000002936	tnrc6c1	97	47.833	ENSPSIG00000018069	TNRC6C	99	47.541	Pelodiscus_sinensis
ENSFHEG00000002936	tnrc6c1	93	73.529	ENSPMGG00000022911	tnrc6c1	98	78.947	Periophthalmus_magnuspinnatus
ENSFHEG00000002936	tnrc6c1	99	47.211	ENSPEMG00000009785	Tnrc6c	96	46.119	Peromyscus_maniculatus_bairdii
ENSFHEG00000002936	tnrc6c1	50	38.818	ENSPCIG00000017421	-	89	38.624	Phascolarctos_cinereus
ENSFHEG00000002936	tnrc6c1	100	93.240	ENSPFOG00000012560	tnrc6c1	99	93.053	Poecilia_formosa
ENSFHEG00000002936	tnrc6c1	94	90.970	ENSPLAG00000021055	tnrc6c1	100	93.071	Poecilia_latipinna
ENSFHEG00000002936	tnrc6c1	99	48.364	ENSPPYG00000008679	TNRC6C	93	69.659	Pongo_abelii
ENSFHEG00000002936	tnrc6c1	68	60.870	ENSPCAG00000012510	TNRC6C	63	97.619	Procavia_capensis
ENSFHEG00000002936	tnrc6c1	92	49.721	ENSPCOG00000021451	TNRC6C	89	66.770	Propithecus_coquereli
ENSFHEG00000002936	tnrc6c1	70	61.538	ENSPVAG00000002008	TNRC6C	95	60.769	Pteropus_vampyrus
ENSFHEG00000002936	tnrc6c1	100	79.988	ENSPNYG00000014477	tnrc6c1	100	80.647	Pundamilia_nyererei
ENSFHEG00000002936	tnrc6c1	92	47.741	ENSRNOG00000022395	Tnrc6c	80	51.595	Rattus_norvegicus
ENSFHEG00000002936	tnrc6c1	99	45.788	ENSRBIG00000027777	TNRC6C	89	70.675	Rhinopithecus_bieti
ENSFHEG00000002936	tnrc6c1	99	45.736	ENSRROG00000042912	TNRC6C	89	70.675	Rhinopithecus_roxellana
ENSFHEG00000002936	tnrc6c1	99	45.722	ENSSBOG00000023981	TNRC6C	89	69.659	Saimiri_boliviensis_boliviensis
ENSFHEG00000002936	tnrc6c1	51	63.494	ENSSHAG00000018330	-	91	66.615	Sarcophilus_harrisii
ENSFHEG00000002936	tnrc6c1	84	61.538	ENSSFOG00015004735	-	99	66.244	Scleropages_formosus
ENSFHEG00000002936	tnrc6c1	99	58.151	ENSSFOG00015006475	tnrc6c1	96	57.722	Scleropages_formosus
ENSFHEG00000002936	tnrc6c1	100	79.689	ENSSMAG00000012761	tnrc6c1	100	81.597	Scophthalmus_maximus
ENSFHEG00000002936	tnrc6c1	99	82.619	ENSSDUG00000002366	tnrc6c1	98	84.369	Seriola_dumerili
ENSFHEG00000002936	tnrc6c1	94	82.529	ENSSLDG00000025613	tnrc6c1	100	84.375	Seriola_lalandi_dorsalis
ENSFHEG00000002936	tnrc6c1	66	61.832	ENSSARG00000006816	TNRC6C	86	93.750	Sorex_araneus
ENSFHEG00000002936	tnrc6c1	75	86.486	ENSSPUG00000007341	TNRC6C	90	100.000	Sphenodon_punctatus
ENSFHEG00000002936	tnrc6c1	98	84.548	ENSSPAG00000014977	tnrc6c1	98	85.128	Stegastes_partitus
ENSFHEG00000002936	tnrc6c1	92	46.128	ENSSSCG00000034373	TNRC6C	80	52.879	Sus_scrofa
ENSFHEG00000002936	tnrc6c1	90	48.907	ENSTGUG00000007733	TNRC6C	99	49.116	Taeniopygia_guttata
ENSFHEG00000002936	tnrc6c1	99	74.233	ENSTRUG00000011685	tnrc6c1	100	72.892	Takifugu_rubripes
ENSFHEG00000002936	tnrc6c1	99	69.465	ENSTNIG00000005273	tnrc6c1	100	75.532	Tetraodon_nigroviridis
ENSFHEG00000002936	tnrc6c1	65	48.485	ENSTBEG00000005046	TNRC6C	100	49.013	Tupaia_belangeri
ENSFHEG00000002936	tnrc6c1	97	47.861	ENSTTRG00000010828	TNRC6C	99	47.617	Tursiops_truncatus
ENSFHEG00000002936	tnrc6c1	99	46.792	ENSUMAG00000013614	TNRC6C	97	46.243	Ursus_maritimus
ENSFHEG00000002936	tnrc6c1	92	50.778	ENSVVUG00000015268	TNRC6C	100	50.365	Vulpes_vulpes
ENSFHEG00000002936	tnrc6c1	92	48.258	ENSXETG00000019470	tnrc6c	80	50.949	Xenopus_tropicalis
ENSFHEG00000002936	tnrc6c1	99	92.814	ENSXMAG00000025971	tnrc6c1	100	92.750	Xiphophorus_maculatus