EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSFHEG00000003162 (Gene tree)
Gene ID: 105936301
Gene Symbol: trmu
Alias: zgc:110555
Full Name: tRNA 5-methylaminomethyl-2-thiouridylate methyltransferase
Gene Type: protein_coding
Species: Fundulus_heteroclitus
Status: putative
Strand: Plus strand
Length: 6614 bases
Position: chrKN811479.1:1258966-1265579
Accession: 105936301
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSFHEP00000002334	tRNA_Me_trans	PF03054.16	3e-135	1	1
ENSFHEP00000002350	tRNA_Me_trans	PF03054.16	1.3e-126	1	1
ENSFHEP00000002326	tRNA_Me_trans	PF03054.16	3.2e-119	1	1
ENSFHEP00000002353	tRNA_Me_trans	PF03054.16	1.6e-117	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSFHET00000012370	-	4210	-	ENSFHEP00000002353	481 (aa)	-	-
ENSFHET00000012396	-	4029	XM_012877059	ENSFHEP00000002334	416 (aa)	XP_012732513	A0A146ZQU8
ENSFHET00000012384	-	4128	-	ENSFHEP00000002350	375 (aa)	-	-
ENSFHET00000012408	-	1197	-	ENSFHEP00000002326	398 (aa)	-	-

Gene Model

Click here to download ENSFHEG00000003162's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSFHEG00000003162's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSFHEG00000003162	trmu	98	72.207	ENSG00000100416	TRMU	96	76.730	Homo_sapiens
ENSFHEG00000003162	trmu	100	87.050	ENSAPOG00000014458	trmu	100	87.050	Acanthochromis_polyacanthus
ENSFHEG00000003162	trmu	97	73.554	ENSAMEG00000003319	TRMU	96	72.932	Ailuropoda_melanoleuca
ENSFHEG00000003162	trmu	98	88.556	ENSACIG00000002101	trmu	100	86.538	Amphilophus_citrinellus
ENSFHEG00000003162	trmu	100	88.010	ENSAOCG00000013155	trmu	100	88.010	Amphiprion_ocellaris
ENSFHEG00000003162	trmu	100	87.770	ENSAPEG00000013350	trmu	100	87.770	Amphiprion_percula
ENSFHEG00000003162	trmu	98	86.921	ENSATEG00000007814	trmu	100	84.615	Anabas_testudineus
ENSFHEG00000003162	trmu	94	73.265	ENSAPLG00000016380	TRMU	99	73.265	Anas_platyrhynchos
ENSFHEG00000003162	trmu	97	73.278	ENSACAG00000007720	TRMU	99	71.186	Anolis_carolinensis
ENSFHEG00000003162	trmu	98	71.662	ENSANAG00000038053	TRMU	98	70.290	Aotus_nancymaae
ENSFHEG00000003162	trmu	100	87.260	ENSACLG00000005395	trmu	100	87.260	Astatotilapia_calliptera
ENSFHEG00000003162	trmu	98	78.474	ENSAMXG00000005282	trmu	99	76.829	Astyanax_mexicanus
ENSFHEG00000003162	trmu	98	72.207	ENSBTAG00000005595	TRMU	99	70.913	Bos_taurus
ENSFHEG00000003162	trmu	97	40.214	WBGene00007114	mttu-1	99	40.051	Caenorhabditis_elegans
ENSFHEG00000003162	trmu	98	70.300	ENSCJAG00000000198	TRMU	99	68.675	Callithrix_jacchus
ENSFHEG00000003162	trmu	98	73.025	ENSCAFG00000000779	TRMU	98	70.983	Canis_familiaris
ENSFHEG00000003162	trmu	98	73.025	ENSCAFG00020009184	TRMU	98	70.983	Canis_lupus_dingo
ENSFHEG00000003162	trmu	100	70.743	ENSCHIG00000017074	TRMU	100	70.743	Capra_hircus
ENSFHEG00000003162	trmu	97	73.554	ENSTSYG00000003853	TRMU	95	72.682	Carlito_syrichta
ENSFHEG00000003162	trmu	96	66.348	ENSCAPG00000013034	TRMU	98	66.348	Cavia_aperea
ENSFHEG00000003162	trmu	98	71.662	ENSCPOG00000020780	TRMU	99	70.361	Cavia_porcellus
ENSFHEG00000003162	trmu	98	71.390	ENSCCAG00000021641	TRMU	99	69.639	Cebus_capucinus
ENSFHEG00000003162	trmu	98	71.117	ENSCATG00000032800	TRMU	99	69.712	Cercocebus_atys
ENSFHEG00000003162	trmu	98	72.207	ENSCLAG00000017269	TRMU	95	72.682	Chinchilla_lanigera
ENSFHEG00000003162	trmu	98	71.117	ENSCSAG00000005279	TRMU	99	69.952	Chlorocebus_sabaeus
ENSFHEG00000003162	trmu	91	73.235	ENSCPBG00000011621	TRMU	97	70.951	Chrysemys_picta_bellii
ENSFHEG00000003162	trmu	98	47.044	ENSCING00000019371	-	98	47.044	Ciona_intestinalis
ENSFHEG00000003162	trmu	98	70.572	ENSCANG00000041645	TRMU	99	68.990	Colobus_angolensis_palliatus
ENSFHEG00000003162	trmu	98	70.300	ENSCGRG00001001739	Trmu	99	68.916	Cricetulus_griseus_chok1gshd
ENSFHEG00000003162	trmu	99	64.096	ENSCGRG00000002781	Trmu	99	64.096	Cricetulus_griseus_crigri
ENSFHEG00000003162	trmu	99	80.798	ENSCSEG00000012382	trmu	99	80.798	Cynoglossus_semilaevis
ENSFHEG00000003162	trmu	100	92.067	ENSCVAG00000001366	trmu	100	92.067	Cyprinodon_variegatus
ENSFHEG00000003162	trmu	98	76.839	ENSDARG00000043734	trmu	100	74.038	Danio_rerio
ENSFHEG00000003162	trmu	62	58.621	ENSDNOG00000047245	-	96	57.143	Dasypus_novemcinctus
ENSFHEG00000003162	trmu	98	71.935	ENSDORG00000007455	Trmu	97	72.180	Dipodomys_ordii
ENSFHEG00000003162	trmu	97	43.836	FBgn0040337	CG3021	95	43.782	Drosophila_melanogaster
ENSFHEG00000003162	trmu	51	76.271	ENSETEG00000009394	-	66	76.271	Echinops_telfairi
ENSFHEG00000003162	trmu	97	55.556	ENSEBUG00000007454	trmu	100	55.620	Eptatretus_burgeri
ENSFHEG00000003162	trmu	98	73.025	ENSEASG00005021725	TRMU	99	71.463	Equus_asinus_asinus
ENSFHEG00000003162	trmu	98	73.025	ENSECAG00000000467	TRMU	99	71.463	Equus_caballus
ENSFHEG00000003162	trmu	56	67.500	ENSEEUG00000000074	-	71	52.013	Erinaceus_europaeus
ENSFHEG00000003162	trmu	100	78.657	ENSELUG00000009464	trmu	99	80.435	Esox_lucius
ENSFHEG00000003162	trmu	98	73.569	ENSFCAG00000006533	TRMU	99	71.154	Felis_catus
ENSFHEG00000003162	trmu	94	71.537	ENSFALG00000010035	TRMU	100	71.537	Ficedula_albicollis
ENSFHEG00000003162	trmu	93	68.814	ENSFDAG00000017472	TRMU	99	68.814	Fukomys_damarensis
ENSFHEG00000003162	trmu	98	71.429	ENSGMOG00000001323	trmu	100	71.253	Gadus_morhua
ENSFHEG00000003162	trmu	97	74.933	ENSGALG00000031922	TRMU	99	72.619	Gallus_gallus
ENSFHEG00000003162	trmu	98	93.188	ENSGAFG00000013331	trmu	98	91.687	Gambusia_affinis
ENSFHEG00000003162	trmu	100	82.033	ENSGACG00000019024	trmu	100	82.033	Gasterosteus_aculeatus
ENSFHEG00000003162	trmu	98	71.935	ENSGGOG00000000203	TRMU	99	70.192	Gorilla_gorilla
ENSFHEG00000003162	trmu	100	86.779	ENSHBUG00000023421	trmu	100	86.779	Haplochromis_burtoni
ENSFHEG00000003162	trmu	98	69.755	ENSHGLG00000009278	TRMU	99	68.510	Heterocephalus_glaber_female
ENSFHEG00000003162	trmu	98	69.755	ENSHGLG00100018863	TRMU	99	68.510	Heterocephalus_glaber_male
ENSFHEG00000003162	trmu	98	86.376	ENSHCOG00000013459	trmu	99	84.096	Hippocampus_comes
ENSFHEG00000003162	trmu	98	80.109	ENSIPUG00000009785	trmu	98	80.451	Ictalurus_punctatus
ENSFHEG00000003162	trmu	98	71.117	ENSSTOG00000010993	TRMU	99	69.712	Ictidomys_tridecemlineatus
ENSFHEG00000003162	trmu	98	70.572	ENSJJAG00000000667	Trmu	99	69.157	Jaculus_jaculus
ENSFHEG00000003162	trmu	100	85.817	ENSKMAG00000008516	trmu	100	85.817	Kryptolebias_marmoratus
ENSFHEG00000003162	trmu	100	84.135	ENSLBEG00000018831	trmu	100	84.135	Labrus_bergylta
ENSFHEG00000003162	trmu	97	76.986	ENSLACG00000013713	TRMU	99	74.279	Latimeria_chalumnae
ENSFHEG00000003162	trmu	98	80.109	ENSLOCG00000016066	trmu	96	80.000	Lepisosteus_oculatus
ENSFHEG00000003162	trmu	99	62.035	ENSLAFG00000005129	TRMU	99	62.035	Loxodonta_africana
ENSFHEG00000003162	trmu	98	71.390	ENSMFAG00000039767	TRMU	99	70.192	Macaca_fascicularis
ENSFHEG00000003162	trmu	98	71.390	ENSMMUG00000000807	TRMU	99	70.192	Macaca_mulatta
ENSFHEG00000003162	trmu	98	71.390	ENSMNEG00000028164	TRMU	99	70.192	Macaca_nemestrina
ENSFHEG00000003162	trmu	98	71.117	ENSMLEG00000033884	TRMU	99	69.712	Mandrillus_leucophaeus
ENSFHEG00000003162	trmu	98	86.413	ENSMAMG00000004717	trmu	100	83.894	Mastacembelus_armatus
ENSFHEG00000003162	trmu	100	87.260	ENSMZEG00005015797	trmu	100	87.260	Maylandia_zebra
ENSFHEG00000003162	trmu	81	70.845	ENSMGAG00000007550	TRMU	100	70.845	Meleagris_gallopavo
ENSFHEG00000003162	trmu	98	70.572	ENSMAUG00000022282	Trmu	100	68.585	Mesocricetus_auratus
ENSFHEG00000003162	trmu	97	72.452	ENSMICG00000029046	TRMU	99	70.316	Microcebus_murinus
ENSFHEG00000003162	trmu	98	70.300	ENSMOCG00000014641	Trmu	100	68.585	Microtus_ochrogaster
ENSFHEG00000003162	trmu	100	82.692	ENSMMOG00000007229	trmu	100	82.692	Mola_mola
ENSFHEG00000003162	trmu	97	68.767	ENSMODG00000007433	TRMU	93	68.672	Monodelphis_domestica
ENSFHEG00000003162	trmu	98	85.286	ENSMALG00000007721	trmu	100	82.933	Monopterus_albus
ENSFHEG00000003162	trmu	100	68.345	MGP_CAROLIEiJ_G0020134	Trmu	100	68.345	Mus_caroli
ENSFHEG00000003162	trmu	100	68.825	ENSMUSG00000022386	Trmu	100	68.825	Mus_musculus
ENSFHEG00000003162	trmu	100	68.585	MGP_PahariEiJ_G0020139	Trmu	100	68.585	Mus_pahari
ENSFHEG00000003162	trmu	100	68.825	MGP_SPRETEiJ_G0021031	Trmu	100	68.825	Mus_spretus
ENSFHEG00000003162	trmu	98	73.025	ENSMPUG00000002523	TRMU	99	70.673	Mustela_putorius_furo
ENSFHEG00000003162	trmu	98	71.117	ENSNGAG00000005132	Trmu	99	69.807	Nannospalax_galili
ENSFHEG00000003162	trmu	100	87.260	ENSNBRG00000022690	trmu	99	88.500	Neolamprologus_brichardi
ENSFHEG00000003162	trmu	98	71.935	ENSNLEG00000015773	TRMU	99	69.952	Nomascus_leucogenys
ENSFHEG00000003162	trmu	87	59.633	ENSMEUG00000000216	TRMU	99	59.633	Notamacropus_eugenii
ENSFHEG00000003162	trmu	98	71.117	ENSODEG00000014745	TRMU	100	69.544	Octodon_degus
ENSFHEG00000003162	trmu	100	87.019	ENSONIG00000009821	trmu	100	87.019	Oreochromis_niloticus
ENSFHEG00000003162	trmu	91	69.591	ENSOANG00000001891	TRMU	94	69.892	Ornithorhynchus_anatinus
ENSFHEG00000003162	trmu	93	70.000	ENSOCUG00000003664	TRMU	98	68.873	Oryctolagus_cuniculus
ENSFHEG00000003162	trmu	99	82.410	ENSORLG00000019015	trmu	99	82.410	Oryzias_latipes
ENSFHEG00000003162	trmu	98	83.651	ENSORLG00020006830	trmu	99	82.651	Oryzias_latipes_hni
ENSFHEG00000003162	trmu	98	83.651	ENSORLG00015003907	trmu	99	82.651	Oryzias_latipes_hsok
ENSFHEG00000003162	trmu	61	81.818	ENSOMEG00000015541	trmu	90	81.818	Oryzias_melastigma
ENSFHEG00000003162	trmu	98	71.935	ENSOGAG00000008096	TRMU	99	69.952	Otolemur_garnettii
ENSFHEG00000003162	trmu	98	70.652	ENSOARG00000019475	TRMU	100	65.468	Ovis_aries
ENSFHEG00000003162	trmu	98	71.935	ENSPPAG00000033944	TRMU	99	70.192	Pan_paniscus
ENSFHEG00000003162	trmu	98	73.569	ENSPPRG00000004197	TRMU	99	71.154	Panthera_pardus
ENSFHEG00000003162	trmu	74	73.285	ENSPTIG00000014122	TRMU	97	75.000	Panthera_tigris_altaica
ENSFHEG00000003162	trmu	98	71.935	ENSPTRG00000014510	TRMU	99	70.192	Pan_troglodytes
ENSFHEG00000003162	trmu	98	71.117	ENSPANG00000023074	TRMU	97	69.041	Papio_anubis
ENSFHEG00000003162	trmu	100	76.316	ENSPKIG00000002849	trmu	100	76.316	Paramormyrops_kingsleyae
ENSFHEG00000003162	trmu	89	73.795	ENSPSIG00000013020	TRMU	99	71.466	Pelodiscus_sinensis
ENSFHEG00000003162	trmu	100	81.731	ENSPMGG00000004083	trmu	100	81.731	Periophthalmus_magnuspinnatus
ENSFHEG00000003162	trmu	98	70.300	ENSPEMG00000014007	Trmu	100	68.585	Peromyscus_maniculatus_bairdii
ENSFHEG00000003162	trmu	96	67.131	ENSPCIG00000009923	TRMU	97	65.060	Phascolarctos_cinereus
ENSFHEG00000003162	trmu	97	87.160	ENSPFOG00000008197	trmu	91	87.160	Poecilia_formosa
ENSFHEG00000003162	trmu	98	91.826	ENSPLAG00000008414	trmu	99	90.602	Poecilia_latipinna
ENSFHEG00000003162	trmu	100	90.865	ENSPMEG00000004326	trmu	100	90.865	Poecilia_mexicana
ENSFHEG00000003162	trmu	99	91.084	ENSPREG00000007980	trmu	99	91.084	Poecilia_reticulata
ENSFHEG00000003162	trmu	98	72.207	ENSPPYG00000011949	TRMU	99	70.673	Pongo_abelii
ENSFHEG00000003162	trmu	93	62.887	ENSPCAG00000013462	TRMU	99	62.887	Procavia_capensis
ENSFHEG00000003162	trmu	97	71.625	ENSPCOG00000016539	TRMU	99	68.990	Propithecus_coquereli
ENSFHEG00000003162	trmu	98	66.757	ENSPVAG00000013202	TRMU	99	65.625	Pteropus_vampyrus
ENSFHEG00000003162	trmu	100	86.779	ENSPNYG00000005629	trmu	100	86.779	Pundamilia_nyererei
ENSFHEG00000003162	trmu	98	79.837	ENSPNAG00000006339	trmu	95	78.922	Pygocentrus_nattereri
ENSFHEG00000003162	trmu	100	68.585	ENSRNOG00000016465	Trmu	100	68.585	Rattus_norvegicus
ENSFHEG00000003162	trmu	98	70.572	ENSRBIG00000038973	TRMU	99	68.990	Rhinopithecus_bieti
ENSFHEG00000003162	trmu	98	70.845	ENSRROG00000004267	TRMU	99	69.231	Rhinopithecus_roxellana
ENSFHEG00000003162	trmu	97	33.420	YDL033C	SLM3	91	34.243	Saccharomyces_cerevisiae
ENSFHEG00000003162	trmu	98	70.572	ENSSBOG00000030184	TRMU	99	69.398	Saimiri_boliviensis_boliviensis
ENSFHEG00000003162	trmu	90	76.203	ENSSFOG00015020664	trmu	98	76.203	Scleropages_formosus
ENSFHEG00000003162	trmu	100	83.173	ENSSMAG00000019450	trmu	100	83.173	Scophthalmus_maximus
ENSFHEG00000003162	trmu	100	86.779	ENSSDUG00000011913	trmu	100	86.779	Seriola_dumerili
ENSFHEG00000003162	trmu	100	86.538	ENSSLDG00000011684	trmu	100	86.538	Seriola_lalandi_dorsalis
ENSFHEG00000003162	trmu	99	64.141	ENSSPUG00000017123	TRMU	98	64.141	Sphenodon_punctatus
ENSFHEG00000003162	trmu	100	85.096	ENSSPAG00000021875	trmu	100	85.096	Stegastes_partitus
ENSFHEG00000003162	trmu	98	71.117	ENSSSCG00000000007	TRMU	99	69.451	Sus_scrofa
ENSFHEG00000003162	trmu	91	75.367	ENSTGUG00000003663	-	100	74.799	Taeniopygia_guttata
ENSFHEG00000003162	trmu	98	85.286	ENSTRUG00000001231	trmu	100	83.535	Takifugu_rubripes
ENSFHEG00000003162	trmu	98	85.908	ENSTNIG00000010484	trmu	98	84.173	Tetraodon_nigroviridis
ENSFHEG00000003162	trmu	77	54.622	ENSTBEG00000011276	-	81	54.622	Tupaia_belangeri
ENSFHEG00000003162	trmu	97	73.278	ENSTTRG00000004160	TRMU	94	73.418	Tursiops_truncatus
ENSFHEG00000003162	trmu	78	74.914	ENSUAMG00000024825	TRMU	97	74.914	Ursus_americanus
ENSFHEG00000003162	trmu	97	61.055	ENSUMAG00000019079	TRMU	97	74.319	Ursus_maritimus
ENSFHEG00000003162	trmu	58	62.100	ENSVPAG00000000685	-	100	62.100	Vicugna_pacos
ENSFHEG00000003162	trmu	98	72.207	ENSVVUG00000024963	TRMU	99	69.952	Vulpes_vulpes
ENSFHEG00000003162	trmu	98	75.272	ENSXETG00000023304	trmu	96	73.415	Xenopus_tropicalis
ENSFHEG00000003162	trmu	98	90.811	ENSXCOG00000015105	trmu	99	89.713	Xiphophorus_couchianus
ENSFHEG00000003162	trmu	98	93.460	ENSXMAG00000006697	trmu	99	92.048	Xiphophorus_maculatus