EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSFHEG00000003362 (Gene tree)
Gene ID: -
Gene Symbol: LSM14B (1 of many)
Alias: C20orf40|FAM61B|FLJ25473|FT005|LSM13|RAP55B|bA11M20.3
Full Name: protein LSM14 homolog B-like
Gene Type: protein_coding
Species: Fundulus_heteroclitus
Status: putative
Strand: Plus strand
Length: 3173 bases
Position: chrKN811386.1:728897-732069
Accession: 105932271
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSFHEP00000002573	LSM14	PF12701.7	1e-26	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSFHET00000012004	LSM14B (1 of many)-201	2474	XM_021320919	ENSFHEP00000002573	391 (aa)	XP_021176594	-

Gene Model

Click here to download ENSFHEG00000003362's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSFHEG00000003362's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSFHEG00000003362	LSM14B	75	45.574	ENSFHEG00000006237	lsm14b	77	45.574
ENSFHEG00000003362	LSM14B	73	39.394	ENSFHEG00000021882	lsm14ab	62	39.041

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSFHEG00000003362	LSM14B	76	45.066	ENSG00000149657	LSM14B	96	39.677	Homo_sapiens
ENSFHEG00000003362	LSM14B	70	51.237	ENSAPOG00000001780	lsm14b	71	51.273	Acanthochromis_polyacanthus
ENSFHEG00000003362	LSM14B	80	38.950	ENSAMEG00000013430	LSM14B	82	36.290	Ailuropoda_melanoleuca
ENSFHEG00000003362	LSM14B	72	48.789	ENSACIG00000012266	lsm14b	71	47.101	Amphilophus_citrinellus
ENSFHEG00000003362	LSM14B	82	65.231	ENSAOCG00000006667	LSM14B	81	65.831	Amphiprion_ocellaris
ENSFHEG00000003362	LSM14B	70	50.530	ENSAOCG00000012380	lsm14b	71	50.725	Amphiprion_ocellaris
ENSFHEG00000003362	LSM14B	70	46.595	ENSAPEG00000023633	lsm14b	69	44.803	Amphiprion_percula
ENSFHEG00000003362	LSM14B	57	47.222	ENSATEG00000015895	LSM14B	77	48.810	Anabas_testudineus
ENSFHEG00000003362	LSM14B	77	49.026	ENSATEG00000016603	lsm14b	69	50.725	Anabas_testudineus
ENSFHEG00000003362	LSM14B	73	33.807	ENSAPLG00000013203	LSM14B	78	35.671	Anas_platyrhynchos
ENSFHEG00000003362	LSM14B	82	43.605	ENSACAG00000016195	LSM14B	78	42.262	Anolis_carolinensis
ENSFHEG00000003362	LSM14B	76	45.902	ENSANAG00000037915	LSM14B	74	42.006	Aotus_nancymaae
ENSFHEG00000003362	LSM14B	69	50.182	ENSACLG00000019663	lsm14b	72	50.182	Astatotilapia_calliptera
ENSFHEG00000003362	LSM14B	82	50.592	ENSAMXG00000002865	lsm14b	81	52.294	Astyanax_mexicanus
ENSFHEG00000003362	LSM14B	80	38.950	ENSBTAG00000021558	LSM14B	81	39.560	Bos_taurus
ENSFHEG00000003362	LSM14B	76	45.183	ENSCJAG00000014434	LSM14B	74	42.581	Callithrix_jacchus
ENSFHEG00000003362	LSM14B	71	36.533	ENSCAFG00000012518	LSM14B	73	34.185	Canis_familiaris
ENSFHEG00000003362	LSM14B	76	46.358	ENSCAFG00020022150	LSM14B	74	42.765	Canis_lupus_dingo
ENSFHEG00000003362	LSM14B	78	33.851	ENSCHIG00000022681	-	72	33.645	Capra_hircus
ENSFHEG00000003362	LSM14B	80	43.963	ENSCHIG00000010284	-	79	44.582	Capra_hircus
ENSFHEG00000003362	LSM14B	65	42.308	ENSTSYG00000031914	LSM14B	50	58.095	Carlito_syrichta
ENSFHEG00000003362	LSM14B	66	43.130	ENSCAPG00000013059	LSM14B	71	40.221	Cavia_aperea
ENSFHEG00000003362	LSM14B	65	42.912	ENSCPOG00000038080	LSM14B	71	39.706	Cavia_porcellus
ENSFHEG00000003362	LSM14B	72	32.404	ENSCCAG00000024900	-	62	30.031	Cebus_capucinus
ENSFHEG00000003362	LSM14B	76	45.902	ENSCCAG00000021267	LSM14B	63	60.563	Cebus_capucinus
ENSFHEG00000003362	LSM14B	81	42.042	ENSCATG00000036006	LSM14B	74	41.379	Cercocebus_atys
ENSFHEG00000003362	LSM14B	65	43.774	ENSCLAG00000003186	LSM14B	71	39.852	Chinchilla_lanigera
ENSFHEG00000003362	LSM14B	76	39.942	ENSCSAG00000015729	LSM14B	76	37.822	Chlorocebus_sabaeus
ENSFHEG00000003362	LSM14B	82	40.374	ENSCPBG00000027065	LSM14B	79	38.587	Chrysemys_picta_bellii
ENSFHEG00000003362	LSM14B	71	38.621	ENSCANG00000036986	LSM14B	57	57.843	Colobus_angolensis_palliatus
ENSFHEG00000003362	LSM14B	81	44.848	ENSCGRG00001018399	Lsm14b	74	42.765	Cricetulus_griseus_chok1gshd
ENSFHEG00000003362	LSM14B	70	49.643	ENSCSEG00000004722	lsm14b	70	48.364	Cynoglossus_semilaevis
ENSFHEG00000003362	LSM14B	80	55.183	ENSCSEG00000020669	LSM14B	73	56.897	Cynoglossus_semilaevis
ENSFHEG00000003362	LSM14B	82	45.536	ENSDARG00000025386	lsm14b	69	46.690	Danio_rerio
ENSFHEG00000003362	LSM14B	66	43.130	ENSDORG00000016683	Lsm14b	63	39.781	Dipodomys_ordii
ENSFHEG00000003362	LSM14B	76	38.944	ENSETEG00000001869	-	68	37.681	Echinops_telfairi
ENSFHEG00000003362	LSM14B	80	44.237	ENSECAG00000010659	LSM14B	79	42.296	Equus_caballus
ENSFHEG00000003362	LSM14B	84	51.807	ENSELUG00000016299	LSM14B	81	53.797	Esox_lucius
ENSFHEG00000003362	LSM14B	82	49.846	ENSELUG00000005780	lsm14b	78	49.211	Esox_lucius
ENSFHEG00000003362	LSM14B	80	44.860	ENSFCAG00000003248	LSM14B	79	41.692	Felis_catus
ENSFHEG00000003362	LSM14B	72	37.425	ENSFALG00000010618	LSM14B	77	38.535	Ficedula_albicollis
ENSFHEG00000003362	LSM14B	65	42.529	ENSFDAG00000002214	LSM14B	71	39.259	Fukomys_damarensis
ENSFHEG00000003362	LSM14B	71	47.687	ENSGMOG00000017115	lsm14b	68	47.970	Gadus_morhua
ENSFHEG00000003362	LSM14B	82	43.202	ENSGALG00000005125	LSM14B	77	44.695	Gallus_gallus
ENSFHEG00000003362	LSM14B	71	44.138	ENSGAFG00000020318	lsm14b	70	44.286	Gambusia_affinis
ENSFHEG00000003362	LSM14B	52	53.659	ENSGAFG00000013723	LSM14B	68	54.774	Gambusia_affinis
ENSFHEG00000003362	LSM14B	72	48.443	ENSGACG00000009973	lsm14b	70	47.670	Gasterosteus_aculeatus
ENSFHEG00000003362	LSM14B	66	41.667	ENSGGOG00000005630	LSM14B	68	38.321	Gorilla_gorilla
ENSFHEG00000003362	LSM14B	76	46.230	ENSHGLG00000015055	LSM14B	74	42.006	Heterocephalus_glaber_female
ENSFHEG00000003362	LSM14B	65	41.603	ENSHGLG00100015273	LSM14B	71	37.868	Heterocephalus_glaber_male
ENSFHEG00000003362	LSM14B	84	56.587	ENSHCOG00000018747	LSM14B	76	59.060	Hippocampus_comes
ENSFHEG00000003362	LSM14B	86	49.275	ENSIPUG00000014946	lsm14b	76	49.383	Ictalurus_punctatus
ENSFHEG00000003362	LSM14B	65	42.803	ENSSTOG00000020482	LSM14B	71	40.977	Ictidomys_tridecemlineatus
ENSFHEG00000003362	LSM14B	80	45.092	ENSJJAG00000012728	Lsm14b	76	42.587	Jaculus_jaculus
ENSFHEG00000003362	LSM14B	70	50.355	ENSKMAG00000017524	lsm14b	71	50.916	Kryptolebias_marmoratus
ENSFHEG00000003362	LSM14B	79	43.059	ENSLACG00000003849	LSM14B	79	39.674	Latimeria_chalumnae
ENSFHEG00000003362	LSM14B	81	49.398	ENSLOCG00000003746	lsm14b	81	47.929	Lepisosteus_oculatus
ENSFHEG00000003362	LSM14B	72	40.541	ENSLAFG00000007492	LSM14B	75	39.161	Loxodonta_africana
ENSFHEG00000003362	LSM14B	76	45.066	ENSMFAG00000041479	LSM14B	74	41.379	Macaca_fascicularis
ENSFHEG00000003362	LSM14B	76	45.066	ENSMMUG00000014084	LSM14B	64	60.563	Macaca_mulatta
ENSFHEG00000003362	LSM14B	76	45.066	ENSMNEG00000045573	LSM14B	64	60.563	Macaca_nemestrina
ENSFHEG00000003362	LSM14B	71	38.225	ENSMLEG00000040895	LSM14B	57	57.843	Mandrillus_leucophaeus
ENSFHEG00000003362	LSM14B	79	45.513	ENSMAMG00000020539	lsm14b	70	49.077	Mastacembelus_armatus
ENSFHEG00000003362	LSM14B	84	62.090	ENSMAMG00000024124	LSM14B	81	63.950	Mastacembelus_armatus
ENSFHEG00000003362	LSM14B	82	60.909	ENSMZEG00005026001	LSM14B	85	63.190	Maylandia_zebra
ENSFHEG00000003362	LSM14B	69	50.182	ENSMZEG00005000987	lsm14b	72	50.182	Maylandia_zebra
ENSFHEG00000003362	LSM14B	73	39.677	ENSMGAG00000005300	LSM14B	75	41.259	Meleagris_gallopavo
ENSFHEG00000003362	LSM14B	81	44.545	ENSMAUG00000020700	Lsm14b	74	42.444	Mesocricetus_auratus
ENSFHEG00000003362	LSM14B	81	44.179	ENSMICG00000014675	LSM14B	68	62.676	Microcebus_murinus
ENSFHEG00000003362	LSM14B	81	45.317	ENSMOCG00000020600	Lsm14b	74	41.562	Microtus_ochrogaster
ENSFHEG00000003362	LSM14B	82	59.317	ENSMMOG00000017321	LSM14B	80	59.494	Mola_mola
ENSFHEG00000003362	LSM14B	69	48.727	ENSMMOG00000020042	lsm14b	68	45.985	Mola_mola
ENSFHEG00000003362	LSM14B	52	30.588	ENSMODG00000016690	LSM14B	68	30.396	Monodelphis_domestica
ENSFHEG00000003362	LSM14B	82	64.815	ENSMALG00000022251	LSM14B	82	65.409	Monopterus_albus
ENSFHEG00000003362	LSM14B	69	50.360	ENSMALG00000004783	lsm14b	69	50.549	Monopterus_albus
ENSFHEG00000003362	LSM14B	81	45.152	MGP_CAROLIEiJ_G0024770	Lsm14b	72	41.935	Mus_caroli
ENSFHEG00000003362	LSM14B	81	45.152	ENSMUSG00000039108	Lsm14b	72	41.935	Mus_musculus
ENSFHEG00000003362	LSM14B	81	45.152	MGP_PahariEiJ_G0026214	Lsm14b	72	41.935	Mus_pahari
ENSFHEG00000003362	LSM14B	81	45.152	MGP_SPRETEiJ_G0025693	Lsm14b	72	41.935	Mus_spretus
ENSFHEG00000003362	LSM14B	75	36.176	ENSMPUG00000007584	LSM14B	81	35.088	Mustela_putorius_furo
ENSFHEG00000003362	LSM14B	80	45.031	ENSMLUG00000000304	LSM14B	79	42.121	Myotis_lucifugus
ENSFHEG00000003362	LSM14B	65	41.762	ENSNLEG00000015757	LSM14B	57	57.843	Nomascus_leucogenys
ENSFHEG00000003362	LSM14B	76	46.557	ENSODEG00000004099	LSM14B	74	42.320	Octodon_degus
ENSFHEG00000003362	LSM14B	71	50.530	ENSONIG00000020318	lsm14b	79	47.267	Oreochromis_niloticus
ENSFHEG00000003362	LSM14B	73	43.750	ENSOANG00000003370	LSM14B	93	42.244	Ornithorhynchus_anatinus
ENSFHEG00000003362	LSM14B	82	59.006	ENSORLG00000028353	LSM14B	81	58.786	Oryzias_latipes
ENSFHEG00000003362	LSM14B	74	46.026	ENSORLG00000013525	lsm14b	75	46.000	Oryzias_latipes
ENSFHEG00000003362	LSM14B	74	46.026	ENSORLG00020020553	lsm14b	75	46.000	Oryzias_latipes_hni
ENSFHEG00000003362	LSM14B	52	39.738	ENSORLG00020018191	-	70	36.652	Oryzias_latipes_hni
ENSFHEG00000003362	LSM14B	74	46.026	ENSORLG00015016862	lsm14b	75	46.000	Oryzias_latipes_hsok
ENSFHEG00000003362	LSM14B	82	59.627	ENSORLG00015013157	LSM14B	81	59.425	Oryzias_latipes_hsok
ENSFHEG00000003362	LSM14B	52	40.488	ENSOMEG00000000171	-	64	41.837	Oryzias_melastigma
ENSFHEG00000003362	LSM14B	77	44.839	ENSOMEG00000023917	lsm14b	71	48.352	Oryzias_melastigma
ENSFHEG00000003362	LSM14B	81	39.024	ENSOGAG00000003915	LSM14B	76	38.682	Otolemur_garnettii
ENSFHEG00000003362	LSM14B	72	35.152	ENSOARG00000014706	LSM14B	80	35.758	Ovis_aries
ENSFHEG00000003362	LSM14B	66	41.667	ENSPPAG00000035799	LSM14B	57	57.843	Pan_paniscus
ENSFHEG00000003362	LSM14B	80	44.860	ENSPPRG00000009197	LSM14B	79	41.692	Panthera_pardus
ENSFHEG00000003362	LSM14B	51	30.738	ENSPTIG00000021518	LSM14B	61	32.432	Panthera_tigris_altaica
ENSFHEG00000003362	LSM14B	76	45.066	ENSPTRG00000013696	LSM14B	64	60.563	Pan_troglodytes
ENSFHEG00000003362	LSM14B	76	45.066	ENSPANG00000011747	LSM14B	64	60.563	Papio_anubis
ENSFHEG00000003362	LSM14B	83	50.459	ENSPKIG00000003275	lsm14b	88	71.579	Paramormyrops_kingsleyae
ENSFHEG00000003362	LSM14B	72	41.311	ENSPSIG00000014762	LSM14B	74	39.726	Pelodiscus_sinensis
ENSFHEG00000003362	LSM14B	81	44.681	ENSPEMG00000017688	Lsm14b	74	41.613	Peromyscus_maniculatus_bairdii
ENSFHEG00000003362	LSM14B	81	45.015	ENSPCIG00000013405	LSM14B	74	46.179	Phascolarctos_cinereus
ENSFHEG00000003362	LSM14B	75	46.205	ENSPFOG00000005631	lsm14b	70	47.292	Poecilia_formosa
ENSFHEG00000003362	LSM14B	71	48.084	ENSPLAG00000002449	lsm14b	70	47.653	Poecilia_latipinna
ENSFHEG00000003362	LSM14B	82	72.500	ENSPLAG00000005793	LSM14B	80	71.338	Poecilia_latipinna
ENSFHEG00000003362	LSM14B	75	46.205	ENSPMEG00000000745	lsm14b	70	47.292	Poecilia_mexicana
ENSFHEG00000003362	LSM14B	82	71.250	ENSPMEG00000022953	LSM14B	80	71.019	Poecilia_mexicana
ENSFHEG00000003362	LSM14B	52	49.776	ENSPREG00000007828	LSM14B	70	52.074	Poecilia_reticulata
ENSFHEG00000003362	LSM14B	81	44.179	ENSPCOG00000013625	LSM14B	65	61.972	Propithecus_coquereli
ENSFHEG00000003362	LSM14B	82	50.459	ENSPNAG00000012777	lsm14b	80	51.258	Pygocentrus_nattereri
ENSFHEG00000003362	LSM14B	81	40.650	ENSRNOG00000054557	Lsm14b	76	37.255	Rattus_norvegicus
ENSFHEG00000003362	LSM14B	71	38.488	ENSRBIG00000033461	LSM14B	71	38.376	Rhinopithecus_bieti
ENSFHEG00000003362	LSM14B	73	39.731	ENSRROG00000042949	LSM14B	65	39.711	Rhinopithecus_roxellana
ENSFHEG00000003362	LSM14B	65	41.573	ENSSBOG00000032820	LSM14B	57	57.843	Saimiri_boliviensis_boliviensis
ENSFHEG00000003362	LSM14B	73	41.275	ENSSHAG00000015528	LSM14B	70	38.408	Sarcophilus_harrisii
ENSFHEG00000003362	LSM14B	83	47.706	ENSSFOG00015004627	lsm14b	78	47.452	Scleropages_formosus
ENSFHEG00000003362	LSM14B	79	47.950	ENSSMAG00000012725	lsm14b	80	46.273	Scophthalmus_maximus
ENSFHEG00000003362	LSM14B	82	63.303	ENSSMAG00000000135	LSM14B	81	64.174	Scophthalmus_maximus
ENSFHEG00000003362	LSM14B	84	66.269	ENSSDUG00000022770	LSM14B	82	68.652	Seriola_dumerili
ENSFHEG00000003362	LSM14B	71	51.220	ENSSDUG00000020977	lsm14b	71	51.264	Seriola_dumerili
ENSFHEG00000003362	LSM14B	52	50.224	ENSSLDG00000011354	-	74	44.828	Seriola_lalandi_dorsalis
ENSFHEG00000003362	LSM14B	82	43.750	ENSSPUG00000014360	LSM14B	84	42.042	Sphenodon_punctatus
ENSFHEG00000003362	LSM14B	70	49.104	ENSSPAG00000020915	lsm14b	68	47.122	Stegastes_partitus
ENSFHEG00000003362	LSM14B	76	46.026	ENSSSCG00000026052	LSM14B	61	45.545	Sus_scrofa
ENSFHEG00000003362	LSM14B	72	42.373	ENSTGUG00000007884	LSM14B	75	44.000	Taeniopygia_guttata
ENSFHEG00000003362	LSM14B	82	62.037	ENSTRUG00000001529	LSM14B	82	62.579	Takifugu_rubripes
ENSFHEG00000003362	LSM14B	75	46.333	ENSTRUG00000011354	lsm14b	71	49.270	Takifugu_rubripes
ENSFHEG00000003362	LSM14B	77	45.631	ENSTNIG00000002445	lsm14b	70	43.987	Tetraodon_nigroviridis
ENSFHEG00000003362	LSM14B	83	38.438	ENSUAMG00000025298	LSM14B	78	36.364	Ursus_americanus
ENSFHEG00000003362	LSM14B	83	38.438	ENSUMAG00000000480	LSM14B	78	36.364	Ursus_maritimus
ENSFHEG00000003362	LSM14B	66	42.642	ENSVVUG00000015920	LSM14B	70	38.545	Vulpes_vulpes
ENSFHEG00000003362	LSM14B	73	49.135	ENSXETG00000001997	lsm14b	95	42.899	Xenopus_tropicalis
ENSFHEG00000003362	LSM14B	71	47.719	ENSXMAG00000010013	lsm14b	70	48.364	Xiphophorus_maculatus