EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSFHEG00000003367 (Gene tree)
Gene ID: 105940143
Gene Symbol: bms1
Alias: bms1l|im:7152071|wu:fb37d08
Full Name: BMS1%2C ribosome biogenesis factor
Gene Type: protein_coding
Species: Fundulus_heteroclitus
Status: putative
Strand: Minus strand
Length: 39914 bases
Position: chrKN811601.1:712096-752009
Accession: 105940143
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSFHEP00000002540	AARP2CN	PF08142.12	1.7e-32	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSFHET00000012054	-	5844	XM_012882609	ENSFHEP00000002540	1184 (aa)	XP_012738063	UPI000644D185

Gene Model

Click here to download ENSFHEG00000003367's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSFHEG00000003367's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSFHEG00000003367	bms1	97	66.923	ENSG00000165733	BMS1	85	69.628	Homo_sapiens
ENSFHEG00000003367	bms1	87	79.981	ENSAPOG00000002296	bms1	100	80.737	Acanthochromis_polyacanthus
ENSFHEG00000003367	bms1	98	67.698	ENSAMEG00000016834	BMS1	85	69.231	Ailuropoda_melanoleuca
ENSFHEG00000003367	bms1	100	77.642	ENSACIG00000002588	bms1	100	78.282	Amphilophus_citrinellus
ENSFHEG00000003367	bms1	100	80.753	ENSAOCG00000018088	bms1	100	81.982	Amphiprion_ocellaris
ENSFHEG00000003367	bms1	100	81.624	ENSAPEG00000014673	bms1	100	82.034	Amphiprion_percula
ENSFHEG00000003367	bms1	100	79.508	ENSATEG00000023465	bms1	100	80.917	Anabas_testudineus
ENSFHEG00000003367	bms1	90	72.035	ENSAPLG00000003759	BMS1	85	72.035	Anas_platyrhynchos
ENSFHEG00000003367	bms1	99	66.038	ENSACAG00000004537	-	85	68.831	Anolis_carolinensis
ENSFHEG00000003367	bms1	97	67.052	ENSANAG00000023432	BMS1	85	69.647	Aotus_nancymaae
ENSFHEG00000003367	bms1	100	79.634	ENSACLG00000001294	bms1	100	80.597	Astatotilapia_calliptera
ENSFHEG00000003367	bms1	95	76.886	ENSAMXG00000011236	bms1	89	76.726	Astyanax_mexicanus
ENSFHEG00000003367	bms1	99	68.130	ENSBTAG00000012878	BMS1	85	71.130	Bos_taurus
ENSFHEG00000003367	bms1	86	55.362	WBGene00022021	Y61A9LA.10	94	52.871	Caenorhabditis_elegans
ENSFHEG00000003367	bms1	97	67.054	ENSCJAG00000021705	BMS1	85	68.737	Callithrix_jacchus
ENSFHEG00000003367	bms1	98	69.186	ENSCAFG00000007114	BMS1	85	69.937	Canis_familiaris
ENSFHEG00000003367	bms1	98	69.186	ENSCAFG00020025282	BMS1	85	69.937	Canis_lupus_dingo
ENSFHEG00000003367	bms1	99	67.939	ENSCHIG00000023251	BMS1	85	70.921	Capra_hircus
ENSFHEG00000003367	bms1	99	58.190	ENSCAPG00000008652	BMS1	85	67.568	Cavia_aperea
ENSFHEG00000003367	bms1	99	61.154	ENSCPOG00000000502	BMS1	85	68.607	Cavia_porcellus
ENSFHEG00000003367	bms1	97	57.440	ENSCCAG00000024969	-	84	58.065	Cebus_capucinus
ENSFHEG00000003367	bms1	97	68.085	ENSCATG00000030625	-	85	69.295	Cercocebus_atys
ENSFHEG00000003367	bms1	89	46.597	ENSCATG00000008695	-	75	56.920	Cercocebus_atys
ENSFHEG00000003367	bms1	95	68.269	ENSCLAG00000002446	BMS1	85	69.008	Chinchilla_lanigera
ENSFHEG00000003367	bms1	97	68.472	ENSCSAG00000011118	BMS1	85	69.215	Chlorocebus_sabaeus
ENSFHEG00000003367	bms1	99	61.293	ENSCHOG00000011055	BMS1	85	69.167	Choloepus_hoffmanni
ENSFHEG00000003367	bms1	96	69.565	ENSCPBG00000025581	BMS1	84	70.103	Chrysemys_picta_bellii
ENSFHEG00000003367	bms1	84	62.217	ENSCING00000003181	-	98	58.891	Ciona_intestinalis
ENSFHEG00000003367	bms1	74	54.588	ENSCSAVG00000004113	-	93	54.253	Ciona_savignyi
ENSFHEG00000003367	bms1	97	68.726	ENSCANG00000011609	BMS1	85	69.647	Colobus_angolensis_palliatus
ENSFHEG00000003367	bms1	98	62.598	ENSCGRG00001019461	Bms1	87	68.930	Cricetulus_griseus_chok1gshd
ENSFHEG00000003367	bms1	98	62.598	ENSCGRG00000009016	Bms1	86	68.930	Cricetulus_griseus_crigri
ENSFHEG00000003367	bms1	100	75.446	ENSCSEG00000002469	bms1	100	75.527	Cynoglossus_semilaevis
ENSFHEG00000003367	bms1	100	87.782	ENSCVAG00000008371	bms1	100	88.462	Cyprinodon_variegatus
ENSFHEG00000003367	bms1	99	72.163	ENSDARG00000054154	bms1	98	72.255	Danio_rerio
ENSFHEG00000003367	bms1	98	67.495	ENSDNOG00000015761	BMS1	85	68.852	Dasypus_novemcinctus
ENSFHEG00000003367	bms1	95	68.174	ENSDORG00000002982	Bms1	85	68.894	Dipodomys_ordii
ENSFHEG00000003367	bms1	98	46.280	FBgn0036686	CG7728	96	47.342	Drosophila_melanogaster
ENSFHEG00000003367	bms1	99	61.325	ENSEASG00005006894	BMS1	87	68.780	Equus_asinus_asinus
ENSFHEG00000003367	bms1	99	62.305	ENSECAG00000001358	BMS1	85	69.295	Equus_caballus
ENSFHEG00000003367	bms1	100	73.333	ENSELUG00000001756	bms1	97	73.099	Esox_lucius
ENSFHEG00000003367	bms1	99	61.868	ENSFCAG00000011220	BMS1	85	69.167	Felis_catus
ENSFHEG00000003367	bms1	96	70.531	ENSFALG00000006882	BMS1	84	70.096	Ficedula_albicollis
ENSFHEG00000003367	bms1	99	60.157	ENSFDAG00000001422	BMS1	85	67.532	Fukomys_damarensis
ENSFHEG00000003367	bms1	99	71.477	ENSGMOG00000000718	bms1	97	71.071	Gadus_morhua
ENSFHEG00000003367	bms1	99	65.936	ENSGALG00000002624	BMS1	86	70.161	Gallus_gallus
ENSFHEG00000003367	bms1	97	82.097	ENSGACG00000015334	bms1	89	80.990	Gasterosteus_aculeatus
ENSFHEG00000003367	bms1	96	69.968	ENSGAGG00000003467	BMS1	87	69.691	Gopherus_agassizii
ENSFHEG00000003367	bms1	100	79.684	ENSHBUG00000022628	bms1	100	80.565	Haplochromis_burtoni
ENSFHEG00000003367	bms1	99	66.308	ENSHGLG00000000477	BMS1	86	69.628	Heterocephalus_glaber_female
ENSFHEG00000003367	bms1	99	66.308	ENSHGLG00100002176	BMS1	86	69.628	Heterocephalus_glaber_male
ENSFHEG00000003367	bms1	99	79.275	ENSHCOG00000017604	bms1	99	79.304	Hippocampus_comes
ENSFHEG00000003367	bms1	99	70.071	ENSIPUG00000017855	bms1	91	78.275	Ictalurus_punctatus
ENSFHEG00000003367	bms1	54	66.154	ENSSTOG00000015063	BMS1	85	69.439	Ictidomys_tridecemlineatus
ENSFHEG00000003367	bms1	54	67.180	ENSJJAG00000017328	Bms1	87	69.358	Jaculus_jaculus
ENSFHEG00000003367	bms1	65	77.922	ENSKMAG00000021982	bms1	97	77.922	Kryptolebias_marmoratus
ENSFHEG00000003367	bms1	100	77.018	ENSLBEG00000028208	bms1	100	77.329	Labrus_bergylta
ENSFHEG00000003367	bms1	98	65.392	ENSLACG00000001600	BMS1	87	66.735	Latimeria_chalumnae
ENSFHEG00000003367	bms1	52	76.108	ENSLOCG00000012914	bms1	98	71.667	Lepisosteus_oculatus
ENSFHEG00000003367	bms1	99	66.730	ENSLAFG00000006250	BMS1	85	68.050	Loxodonta_africana
ENSFHEG00000003367	bms1	88	68.472	ENSMFAG00000037771	BMS1	93	69.710	Macaca_fascicularis
ENSFHEG00000003367	bms1	86	60.421	ENSMMUG00000007426	-	82	63.400	Macaca_mulatta
ENSFHEG00000003367	bms1	84	54.348	ENSMLEG00000029084	-	77	56.159	Mandrillus_leucophaeus
ENSFHEG00000003367	bms1	100	79.125	ENSMAMG00000020855	bms1	100	79.139	Mastacembelus_armatus
ENSFHEG00000003367	bms1	100	79.551	ENSMZEG00005005663	bms1	100	80.514	Maylandia_zebra
ENSFHEG00000003367	bms1	91	70.178	ENSMGAG00000001170	BMS1	86	70.000	Meleagris_gallopavo
ENSFHEG00000003367	bms1	98	62.126	ENSMAUG00000002195	Bms1	87	68.724	Mesocricetus_auratus
ENSFHEG00000003367	bms1	99	61.831	ENSMICG00000009977	BMS1	85	69.215	Microcebus_murinus
ENSFHEG00000003367	bms1	96	66.990	ENSMOCG00000002038	Bms1	85	69.136	Microtus_ochrogaster
ENSFHEG00000003367	bms1	100	78.894	ENSMMOG00000000977	bms1	100	78.745	Mola_mola
ENSFHEG00000003367	bms1	99	66.978	ENSMODG00000001177	BMS1	85	69.293	Monodelphis_domestica
ENSFHEG00000003367	bms1	100	79.818	ENSMALG00000009680	bms1	100	79.342	Monopterus_albus
ENSFHEG00000003367	bms1	77	78.723	MGP_CAROLIEiJ_G0028785	-	59	78.933	Mus_caroli
ENSFHEG00000003367	bms1	98	61.351	ENSMUSG00000030138	Bms1	85	68.388	Mus_musculus
ENSFHEG00000003367	bms1	96	66.732	MGP_PahariEiJ_G0022539	Bms1	85	68.724	Mus_pahari
ENSFHEG00000003367	bms1	98	61.460	MGP_SPRETEiJ_G0029816	Bms1	85	68.182	Mus_spretus
ENSFHEG00000003367	bms1	97	68.411	ENSMPUG00000017276	BMS1	85	69.937	Mustela_putorius_furo
ENSFHEG00000003367	bms1	99	61.905	ENSMLUG00000003260	BMS1	85	68.530	Myotis_lucifugus
ENSFHEG00000003367	bms1	99	58.010	ENSNGAG00000015258	Bms1	97	57.513	Nannospalax_galili
ENSFHEG00000003367	bms1	97	67.052	ENSNLEG00000015791	BMS1	85	69.358	Nomascus_leucogenys
ENSFHEG00000003367	bms1	86	78.133	ENSOPRG00000005195	BMS1	77	80.000	Ochotona_princeps
ENSFHEG00000003367	bms1	99	64.907	ENSODEG00000005554	BMS1	92	67.423	Octodon_degus
ENSFHEG00000003367	bms1	100	80.297	ENSONIG00000007227	bms1	100	80.795	Oreochromis_niloticus
ENSFHEG00000003367	bms1	99	67.573	ENSOANG00000000662	-	97	61.532	Ornithorhynchus_anatinus
ENSFHEG00000003367	bms1	97	70.254	ENSOCUG00000005354	BMS1	85	70.981	Oryctolagus_cuniculus
ENSFHEG00000003367	bms1	99	81.104	ENSORLG00000014655	bms1	99	80.968	Oryzias_latipes
ENSFHEG00000003367	bms1	99	77.905	ENSORLG00020016246	bms1	99	78.460	Oryzias_latipes_hni
ENSFHEG00000003367	bms1	99	78.624	ENSORLG00015014183	bms1	99	78.770	Oryzias_latipes_hsok
ENSFHEG00000003367	bms1	99	80.805	ENSOMEG00000015042	bms1	99	81.478	Oryzias_melastigma
ENSFHEG00000003367	bms1	97	66.923	ENSOGAG00000006511	BMS1	85	69.485	Otolemur_garnettii
ENSFHEG00000003367	bms1	99	67.424	ENSOARG00000003900	BMS1	85	70.332	Ovis_aries
ENSFHEG00000003367	bms1	97	67.437	ENSPPAG00000027837	BMS1	84	69.421	Pan_paniscus
ENSFHEG00000003367	bms1	99	62.023	ENSPPRG00000001311	BMS1	85	69.375	Panthera_pardus
ENSFHEG00000003367	bms1	98	61.721	ENSPTIG00000009652	BMS1	84	69.311	Panthera_tigris_altaica
ENSFHEG00000003367	bms1	97	67.630	ENSPTRG00000002441	BMS1	85	69.368	Pan_troglodytes
ENSFHEG00000003367	bms1	97	77.636	ENSPKIG00000008165	bms1	86	77.849	Paramormyrops_kingsleyae
ENSFHEG00000003367	bms1	94	68.959	ENSPSIG00000006481	BMS1	85	70.661	Pelodiscus_sinensis
ENSFHEG00000003367	bms1	98	68.463	ENSPEMG00000022467	Bms1	97	69.538	Peromyscus_maniculatus_bairdii
ENSFHEG00000003367	bms1	98	67.023	ENSPCIG00000001339	BMS1	82	74.085	Phascolarctos_cinereus
ENSFHEG00000003367	bms1	97	88.511	ENSPFOG00000015180	bms1	99	86.321	Poecilia_formosa
ENSFHEG00000003367	bms1	99	86.448	ENSPMEG00000023176	bms1	94	86.880	Poecilia_mexicana
ENSFHEG00000003367	bms1	99	85.570	ENSPREG00000002695	bms1	99	86.425	Poecilia_reticulata
ENSFHEG00000003367	bms1	54	66.923	ENSPPYG00000002836	-	75	69.008	Pongo_abelii
ENSFHEG00000003367	bms1	72	73.469	ENSPCAG00000014528	BMS1	73	67.983	Procavia_capensis
ENSFHEG00000003367	bms1	92	65.895	ENSPCOG00000023834	-	85	68.640	Propithecus_coquereli
ENSFHEG00000003367	bms1	99	61.923	ENSPVAG00000000725	BMS1	85	68.958	Pteropus_vampyrus
ENSFHEG00000003367	bms1	100	78.140	ENSPNYG00000018866	bms1	100	78.307	Pundamilia_nyererei
ENSFHEG00000003367	bms1	52	78.240	ENSPNAG00000000676	bms1	87	78.939	Pygocentrus_nattereri
ENSFHEG00000003367	bms1	79	66.667	ENSRNOG00000006576	Bms1	83	69.072	Rattus_norvegicus
ENSFHEG00000003367	bms1	97	67.391	ENSRROG00000040101	BMS1	85	68.019	Rhinopithecus_roxellana
ENSFHEG00000003367	bms1	75	51.546	YPL217C	-	77	54.728	Saccharomyces_cerevisiae
ENSFHEG00000003367	bms1	99	66.822	ENSSBOG00000035778	BMS1	85	69.008	Saimiri_boliviensis_boliviensis
ENSFHEG00000003367	bms1	99	64.804	ENSSHAG00000005062	BMS1	85	69.206	Sarcophilus_harrisii
ENSFHEG00000003367	bms1	55	76.923	ENSSFOG00015022313	bms1	91	79.227	Scleropages_formosus
ENSFHEG00000003367	bms1	100	77.141	ENSSMAG00000019966	bms1	100	78.514	Scophthalmus_maximus
ENSFHEG00000003367	bms1	100	79.658	ENSSDUG00000016875	bms1	100	80.537	Seriola_dumerili
ENSFHEG00000003367	bms1	100	79.254	ENSSLDG00000015199	bms1	100	80.308	Seriola_lalandi_dorsalis
ENSFHEG00000003367	bms1	52	78.000	ENSSARG00000014407	BMS1	66	78.000	Sorex_araneus
ENSFHEG00000003367	bms1	98	69.342	ENSSPUG00000014454	BMS1	85	69.293	Sphenodon_punctatus
ENSFHEG00000003367	bms1	97	68.279	ENSSSCG00000010198	BMS1	85	70.270	Sus_scrofa
ENSFHEG00000003367	bms1	99	71.244	ENSTGUG00000006302	-	86	70.921	Taeniopygia_guttata
ENSFHEG00000003367	bms1	97	73.830	ENSTRUG00000008028	bms1	97	73.766	Takifugu_rubripes
ENSFHEG00000003367	bms1	98	74.152	ENSTNIG00000006216	bms1	87	75.050	Tetraodon_nigroviridis
ENSFHEG00000003367	bms1	65	68.475	ENSTBEG00000001673	-	62	68.456	Tupaia_belangeri
ENSFHEG00000003367	bms1	99	61.875	ENSTTRG00000007983	BMS1	85	68.780	Tursiops_truncatus
ENSFHEG00000003367	bms1	55	66.413	ENSUAMG00000023996	BMS1	85	69.729	Ursus_americanus
ENSFHEG00000003367	bms1	55	66.109	ENSUMAG00000016523	BMS1	85	69.729	Ursus_maritimus
ENSFHEG00000003367	bms1	85	63.859	ENSVPAG00000007477	BMS1	80	73.002	Vicugna_pacos
ENSFHEG00000003367	bms1	98	69.186	ENSVVUG00000021305	BMS1	87	69.937	Vulpes_vulpes
ENSFHEG00000003367	bms1	98	62.156	ENSXETG00000008158	bms1	88	70.192	Xenopus_tropicalis
ENSFHEG00000003367	bms1	99	84.036	ENSXCOG00000000506	bms1	94	92.443	Xiphophorus_couchianus
ENSFHEG00000003367	bms1	99	85.907	ENSXMAG00000014236	bms1	99	87.004	Xiphophorus_maculatus