EuRBPDB

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  • Description
  • RBDs
  • Transcripts
  • Gene Model
  • PPI
  • Paralogs
  • Orthologs
Description
Ensembl ID
ENSFHEG00000003398 (Gene tree)
Gene ID
105927090
Gene Symbol
pabpc1l
Alias
fi20g03|wu:fi20g03|zgc:55855
Full Name
embryonic polyadenylate-binding protein-like
Gene Type
protein_coding
Species
Fundulus_heteroclitus
Status
putative
Strand
Minus strand
Length
12857 bases
Position
chrKN805567.1:125952-138808
Accession
105927090
RBP type
canonical RBP
Summary
-
RNA binding domains(RBDs)
Protein IDDomain Pfam IDE-value Domain number Total number
ENSFHEP00000022793PABPPF00658.181.6e-2911
ENSFHEP00000022798PABPPF00658.181.6e-2911
ENSFHEP00000022787RRM_5PF13893.68e-1113
ENSFHEP00000022787RRM_5PF13893.68e-1123
ENSFHEP00000022787RRM_5PF13893.68e-1133
ENSFHEP00000002578RRM_5PF13893.61.1e-1013
ENSFHEP00000002578RRM_5PF13893.61.1e-1023
ENSFHEP00000002578RRM_5PF13893.61.1e-1033
ENSFHEP00000022798RRM_5PF13893.61.1e-1013
ENSFHEP00000022798RRM_5PF13893.61.1e-1023
ENSFHEP00000022798RRM_5PF13893.61.1e-1033
ENSFHEP00000022793RRM_5PF13893.62.6e-0913
ENSFHEP00000022793RRM_5PF13893.62.6e-0923
ENSFHEP00000022793RRM_5PF13893.62.6e-0933
ENSFHEP00000022787RRM_1PF00076.226.2e-8914
ENSFHEP00000022787RRM_1PF00076.226.2e-8924
ENSFHEP00000022787RRM_1PF00076.226.2e-8934
ENSFHEP00000022787RRM_1PF00076.226.2e-8944
ENSFHEP00000002578RRM_1PF00076.228.4e-8914
ENSFHEP00000002578RRM_1PF00076.228.4e-8924
ENSFHEP00000002578RRM_1PF00076.228.4e-8934
ENSFHEP00000002578RRM_1PF00076.228.4e-8944
ENSFHEP00000022798RRM_1PF00076.228.4e-8914
ENSFHEP00000022798RRM_1PF00076.228.4e-8924
ENSFHEP00000022798RRM_1PF00076.228.4e-8934
ENSFHEP00000022798RRM_1PF00076.228.4e-8944
ENSFHEP00000022793RRM_1PF00076.221.5e-8814
ENSFHEP00000022793RRM_1PF00076.221.5e-8824
ENSFHEP00000022793RRM_1PF00076.221.5e-8834
ENSFHEP00000022793RRM_1PF00076.221.5e-8844
Transcripts
Transcript IDNameLengthRefSeq ID Protein IDLengthRefSeq IDUniportKB ID
ENSFHET00000011955-2305XM_012863695ENSFHEP00000022798644 (aa)XP_012719149UPI000644EC10
ENSFHET00000011976-2174-ENSFHEP00000022787606 (aa)--
ENSFHET00000011963-2218XM_012863702ENSFHEP00000022793615 (aa)XP_012719156UPI000644B1F0
ENSFHET00000011987-1932-ENSFHEP00000002578639 (aa)--
Gene Model
Click here to download ENSFHEG00000003398's gene model file
Protein-Protein Interaction (PPI)

Clik here to download ENSFHEG00000003398's network
Paralogs
Ensembl IDGene SymbolCoverageIdentiy ParalogGene SymbolCoverageIdentiy
ENSFHEG00000003398pabpc1l6434.831ENSFHEG00000015979elavl1a9434.831
ENSFHEG00000003398pabpc1l9969.731ENSFHEG00000018979pabpc1a9869.606
ENSFHEG00000003398pabpc1l10067.195ENSFHEG00000007548pabpc49867.195
ENSFHEG00000003398pabpc1l6345.333ENSFHEG00000006810-8145.333
ENSFHEG00000003398pabpc1l6431.148ENSFHEG00000002832tia1l7432.778
ENSFHEG00000003398pabpc1l9970.794ENSFHEG00000008186pabpc1b9871.383
ENSFHEG00000003398pabpc1l5034.247ENSFHEG00000021947celf3b6434.247
ENSFHEG00000003398pabpc1l6136.364ENSFHEG00000014715-9735.897
ENSFHEG00000003398pabpc1l6432.530ENSFHEG00000018000ncl6031.818
Orthologs
Ensembl IDGene SymbolCoverageIdentiy OrthologGene SymbolCoverageIdentiy Species
ENSFHEG00000003398pabpc1l9969.059ENSG00000101104PABPC1L9876.852Homo_sapiens
ENSFHEG00000003398pabpc1l9983.845ENSAPOG00000010842pabpc1l9983.845Acanthochromis_polyacanthus
ENSFHEG00000003398pabpc1l9964.651ENSAMEG00000004099PABPC1L10064.961Ailuropoda_melanoleuca
ENSFHEG00000003398pabpc1l9990.632ENSACIG00000021004-10090.632Amphilophus_citrinellus
ENSFHEG00000003398pabpc1l10085.942ENSAOCG00000006167-10085.942Amphiprion_ocellaris
ENSFHEG00000003398pabpc1l10084.800ENSAPEG00000010558-9990.367Amphiprion_percula
ENSFHEG00000003398pabpc1l10087.500ENSATEG00000007428pabpc1l10088.141Anabas_testudineus
ENSFHEG00000003398pabpc1l9871.313ENSAPLG00000008415PABPC1L9971.268Anas_platyrhynchos
ENSFHEG00000003398pabpc1l9973.934ENSACAG00000011841PABPC1L9973.934Anolis_carolinensis
ENSFHEG00000003398pabpc1l9969.381ENSANAG00000026826PABPC1L9969.381Aotus_nancymaae
ENSFHEG00000003398pabpc1l10089.137ENSACLG00000024791pabpc1l10089.137Astatotilapia_calliptera
ENSFHEG00000003398pabpc1l10081.210ENSAMXG00000013552pabpc1l10081.210Astyanax_mexicanus
ENSFHEG00000003398pabpc1l6087.500ENSBTAG00000055300-10087.500Bos_taurus
ENSFHEG00000003398pabpc1l6763.604ENSBTAG00000016849PABPC1L8663.604Bos_taurus
ENSFHEG00000003398pabpc1l6580.117ENSCJAG00000038506-10080.460Callithrix_jacchus
ENSFHEG00000003398pabpc1l9969.544ENSCJAG00000017628PABPC1L9969.544Callithrix_jacchus
ENSFHEG00000003398pabpc1l9963.817ENSCAFG00000009573PABPC1L10063.817Canis_familiaris
ENSFHEG00000003398pabpc1l9969.756ENSCAFG00020013828PABPC1L9969.756Canis_lupus_dingo
ENSFHEG00000003398pabpc1l9869.421ENSCHIG00000025759PABPC1L9169.421Capra_hircus
ENSFHEG00000003398pabpc1l9968.352ENSTSYG00000006645PABPC1L9968.352Carlito_syrichta
ENSFHEG00000003398pabpc1l9863.303ENSCAPG00000014519PABPC1L9963.303Cavia_aperea
ENSFHEG00000003398pabpc1l9966.236ENSCPOG00000013633PABPC1L9966.236Cavia_porcellus
ENSFHEG00000003398pabpc1l9968.109ENSCCAG00000023338PABPC1L9968.750Cebus_capucinus
ENSFHEG00000003398pabpc1l9969.726ENSCATG00000034065PABPC1L9969.936Cercocebus_atys
ENSFHEG00000003398pabpc1l9964.620ENSCLAG00000005298PABPC1L9965.590Chinchilla_lanigera
ENSFHEG00000003398pabpc1l9969.565ENSCSAG00000014242PABPC1L9969.775Chlorocebus_sabaeus
ENSFHEG00000003398pabpc1l7775.159ENSCPBG00000017755-9980.090Chrysemys_picta_bellii
ENSFHEG00000003398pabpc1l5989.916ENSCPBG00000007810-8189.916Chrysemys_picta_bellii
ENSFHEG00000003398pabpc1l8163.717ENSCING00000002796-9750.099Ciona_intestinalis
ENSFHEG00000003398pabpc1l9960.032ENSCSAVG00000004246-8972.185Ciona_savignyi
ENSFHEG00000003398pabpc1l9957.278ENSCSAVG00000003102-10085.034Ciona_savignyi
ENSFHEG00000003398pabpc1l9967.203ENSCANG00000037530PABPC1L9967.416Colobus_angolensis_palliatus
ENSFHEG00000003398pabpc1l9961.844ENSCGRG00001021938Pabpc1l9961.844Cricetulus_griseus_chok1gshd
ENSFHEG00000003398pabpc1l9961.844ENSCGRG00000007946Pabpc1l9961.844Cricetulus_griseus_crigri
ENSFHEG00000003398pabpc1l9976.835ENSCSEG00000021295pabpc1l9976.835Cynoglossus_semilaevis
ENSFHEG00000003398pabpc1l10092.557ENSCVAG00000015943-9997.710Cyprinodon_variegatus
ENSFHEG00000003398pabpc1l9978.720ENSDARG00000002597pabpc1l8895.385Danio_rerio
ENSFHEG00000003398pabpc1l9968.590ENSDNOG00000048450PABPC1L9968.590Dasypus_novemcinctus
ENSFHEG00000003398pabpc1l9966.452ENSDORG00000001067Pabpc1l9966.452Dipodomys_ordii
ENSFHEG00000003398pabpc1l9576.829ENSETEG00000009969PABPC1L7276.829Echinops_telfairi
ENSFHEG00000003398pabpc1l5275.949ENSEASG00005023407-6475.949Equus_asinus_asinus
ENSFHEG00000003398pabpc1l6085.119ENSEASG00005023408-10085.119Equus_asinus_asinus
ENSFHEG00000003398pabpc1l7565.984ENSECAG00000040139-8865.984Equus_caballus
ENSFHEG00000003398pabpc1l9967.103ENSEEUG00000005978PABPC1L9967.103Erinaceus_europaeus
ENSFHEG00000003398pabpc1l10081.558ENSELUG00000001811pabpc1l10081.558Esox_lucius
ENSFHEG00000003398pabpc1l9969.823ENSFCAG00000011692PABPC1L9969.823Felis_catus
ENSFHEG00000003398pabpc1l9169.395ENSFALG00000005372PABPC1L9769.497Ficedula_albicollis
ENSFHEG00000003398pabpc1l9965.798ENSFDAG00000008291PABPC1L9966.016Fukomys_damarensis
ENSFHEG00000003398pabpc1l9983.226ENSGMOG00000004437pabpc1l9983.226Gadus_morhua
ENSFHEG00000003398pabpc1l9667.063ENSGALG00000004123PABPC1L9881.356Gallus_gallus
ENSFHEG00000003398pabpc1l10092.791ENSGAFG00000021057pabpc1l10092.791Gambusia_affinis
ENSFHEG00000003398pabpc1l9985.507ENSGACG00000002792pabpc1l10085.507Gasterosteus_aculeatus
ENSFHEG00000003398pabpc1l9973.920ENSGAGG00000000589PABPC1L9679.080Gopherus_agassizii
ENSFHEG00000003398pabpc1l9969.059ENSGGOG00000004584PABPC1L9970.244Gorilla_gorilla
ENSFHEG00000003398pabpc1l10088.978ENSHBUG00000006134pabpc1l10088.978Haplochromis_burtoni
ENSFHEG00000003398pabpc1l9966.126ENSHGLG00000008434PABPC1L9966.451Heterocephalus_glaber_female
ENSFHEG00000003398pabpc1l9966.126ENSHGLG00100012151PABPC1L9966.451Heterocephalus_glaber_male
ENSFHEG00000003398pabpc1l5987.079ENSHGLG00100019506-10087.079Heterocephalus_glaber_male
ENSFHEG00000003398pabpc1l9984.333ENSHCOG00000009270pabpc1l10084.333Hippocampus_comes
ENSFHEG00000003398pabpc1l10080.096ENSIPUG00000012602pabpc1l10080.096Ictalurus_punctatus
ENSFHEG00000003398pabpc1l5962.644ENSIPUG00000006760-8862.644Ictalurus_punctatus
ENSFHEG00000003398pabpc1l6062.644ENSIPUG00000006780-8562.644Ictalurus_punctatus
ENSFHEG00000003398pabpc1l9968.404ENSSTOG00000003739PABPC1L9968.404Ictidomys_tridecemlineatus
ENSFHEG00000003398pabpc1l9952.920ENSJJAG00000022406Pabpc1l9951.506Jaculus_jaculus
ENSFHEG00000003398pabpc1l10089.711ENSKMAG00000016847pabpc1l10089.711Kryptolebias_marmoratus
ENSFHEG00000003398pabpc1l10086.741ENSLBEG00000010084pabpc1l10086.741Labrus_bergylta
ENSFHEG00000003398pabpc1l9972.274ENSLACG00000005762PABPC1L9974.081Latimeria_chalumnae
ENSFHEG00000003398pabpc1l9980.892ENSLOCG00000007519pabpc1l9980.892Lepisosteus_oculatus
ENSFHEG00000003398pabpc1l9967.937ENSLAFG00000003553PABPC1L10067.937Loxodonta_africana
ENSFHEG00000003398pabpc1l9969.243ENSMFAG00000040365PABPC1L9969.453Macaca_fascicularis
ENSFHEG00000003398pabpc1l9969.082ENSMNEG00000032298PABPC1L9969.293Macaca_nemestrina
ENSFHEG00000003398pabpc1l9969.726ENSMLEG00000043139PABPC1L9969.936Mandrillus_leucophaeus
ENSFHEG00000003398pabpc1l9789.037ENSMAMG00000011854pabpc1l9789.037Mastacembelus_armatus
ENSFHEG00000003398pabpc1l10089.137ENSMZEG00005023713pabpc1l10089.137Maylandia_zebra
ENSFHEG00000003398pabpc1l9972.596ENSMGAG00000003674PABPC1L9972.596Meleagris_gallopavo
ENSFHEG00000003398pabpc1l9960.191ENSMOCG00000013186Pabpc1l9960.191Microtus_ochrogaster
ENSFHEG00000003398pabpc1l9986.378ENSMMOG00000020574-9096.923Mola_mola
ENSFHEG00000003398pabpc1l9770.328ENSMODG00000016198PABPC1L9970.328Monodelphis_domestica
ENSFHEG00000003398pabpc1l9984.802ENSMALG00000021622pabpc1l10086.755Monopterus_albus
ENSFHEG00000003398pabpc1l9961.331MGP_CAROLIEiJ_G0024627Pabpc1l9961.331Mus_caroli
ENSFHEG00000003398pabpc1l9961.331ENSMUSG00000054582Pabpc1l9961.331Mus_musculus
ENSFHEG00000003398pabpc1l10061.867MGP_PahariEiJ_G0026071Pabpc1l10061.867Mus_pahari
ENSFHEG00000003398pabpc1l9961.331MGP_SPRETEiJ_G0025549Pabpc1l9961.331Mus_spretus
ENSFHEG00000003398pabpc1l9969.712ENSMPUG00000017646PABPC1L9969.712Mustela_putorius_furo
ENSFHEG00000003398pabpc1l9866.455ENSMLUG00000006324PABPC1L9866.455Myotis_lucifugus
ENSFHEG00000003398pabpc1l9963.033ENSNGAG00000010458Pabpc1l9963.033Nannospalax_galili
ENSFHEG00000003398pabpc1l9993.735ENSNBRG00000016633pabpc1l10093.735Neolamprologus_brichardi
ENSFHEG00000003398pabpc1l9662.371ENSMEUG00000007905-8965.642Notamacropus_eugenii
ENSFHEG00000003398pabpc1l9967.967ENSOPRG00000011846PABPC1L9967.967Ochotona_princeps
ENSFHEG00000003398pabpc1l6481.250ENSODEG00000002920-9781.250Octodon_degus
ENSFHEG00000003398pabpc1l9961.175ENSODEG00000015482PABPC1L9961.175Octodon_degus
ENSFHEG00000003398pabpc1l10089.297ENSONIG00000017314pabpc1l10089.297Oreochromis_niloticus
ENSFHEG00000003398pabpc1l9659.291ENSOANG00000015793-10061.837Ornithorhynchus_anatinus
ENSFHEG00000003398pabpc1l9965.177ENSOCUG00000003005PABPC1L9965.331Oryctolagus_cuniculus
ENSFHEG00000003398pabpc1l9989.953ENSORLG00000010322pabpc1l10089.953Oryzias_latipes
ENSFHEG00000003398pabpc1l9989.953ENSORLG00020021193pabpc1l10089.953Oryzias_latipes_hni
ENSFHEG00000003398pabpc1l9989.953ENSORLG00015017018pabpc1l10089.953Oryzias_latipes_hsok
ENSFHEG00000003398pabpc1l10087.195ENSOMEG00000010789pabpc1l10087.195Oryzias_melastigma
ENSFHEG00000003398pabpc1l9967.568ENSOGAG00000032999PABPC1L9967.568Otolemur_garnettii
ENSFHEG00000003398pabpc1l9969.417ENSOARG00000004578PABPC1L9969.417Ovis_aries
ENSFHEG00000003398pabpc1l9969.219ENSPPAG00000039677PABPC1L9970.358Pan_paniscus
ENSFHEG00000003398pabpc1l6962.040ENSPPRG00000019327-9867.593Panthera_pardus
ENSFHEG00000003398pabpc1l9869.805ENSPTIG00000006524PABPC1L9969.805Panthera_tigris_altaica
ENSFHEG00000003398pabpc1l6377.160ENSPTRG00000013531PABPC1L9877.160Pan_troglodytes
ENSFHEG00000003398pabpc1l9969.726ENSPANG00000018788PABPC1L9969.936Papio_anubis
ENSFHEG00000003398pabpc1l5984.733ENSPKIG00000016810-9384.733Paramormyrops_kingsleyae
ENSFHEG00000003398pabpc1l10079.647ENSPKIG00000007322pabpc1l10079.647Paramormyrops_kingsleyae
ENSFHEG00000003398pabpc1l7376.009ENSPSIG00000013289PABPC1L9981.295Pelodiscus_sinensis
ENSFHEG00000003398pabpc1l6396.212ENSPMGG00000023117pabpc1l9793.953Periophthalmus_magnuspinnatus
ENSFHEG00000003398pabpc1l7183.077ENSPMGG00000023121-9183.077Periophthalmus_magnuspinnatus
ENSFHEG00000003398pabpc1l9959.558ENSPEMG00000020671Pabpc1l9960.664Peromyscus_maniculatus_bairdii
ENSFHEG00000003398pabpc1l10094.194ENSPFOG00000013241pabpc1l10094.194Poecilia_formosa
ENSFHEG00000003398pabpc1l5398.462ENSPLAG00000023686-9298.462Poecilia_latipinna
ENSFHEG00000003398pabpc1l10093.871ENSPLAG00000017490-10093.871Poecilia_latipinna
ENSFHEG00000003398pabpc1l5398.462ENSPMEG00000009185-8898.462Poecilia_mexicana
ENSFHEG00000003398pabpc1l10093.548ENSPMEG00000007677pabpc1l10093.548Poecilia_mexicana
ENSFHEG00000003398pabpc1l6796.350ENSPREG00000015886pabpc1l9996.350Poecilia_reticulata
ENSFHEG00000003398pabpc1l9968.921ENSPPYG00000011042PABPC1L9969.181Pongo_abelii
ENSFHEG00000003398pabpc1l6285.938ENSPCAG00000011787-7585.938Procavia_capensis
ENSFHEG00000003398pabpc1l9968.860ENSPCOG00000020630PABPC1L9968.860Propithecus_coquereli
ENSFHEG00000003398pabpc1l9968.167ENSPVAG00000012663PABPC1L9968.167Pteropus_vampyrus
ENSFHEG00000003398pabpc1l9993.976ENSPNYG00000004101pabpc1l10093.976Pundamilia_nyererei
ENSFHEG00000003398pabpc1l10073.885ENSPNAG00000021248pabpc1l10073.885Pygocentrus_nattereri
ENSFHEG00000003398pabpc1l9961.404ENSRNOG00000012750Pabpc1l9962.003Rattus_norvegicus
ENSFHEG00000003398pabpc1l9969.984ENSRBIG00000035381PABPC1L9969.936Rhinopithecus_bieti
ENSFHEG00000003398pabpc1l9969.565ENSRROG00000044498PABPC1L9969.775Rhinopithecus_roxellana
ENSFHEG00000003398pabpc1l9969.218ENSSBOG00000009532-9969.218Saimiri_boliviensis_boliviensis
ENSFHEG00000003398pabpc1l9864.848ENSSHAG00000011446PABPC1L10064.848Sarcophilus_harrisii
ENSFHEG00000003398pabpc1l10080.127ENSSFOG00015017304pabpc1l10080.127Scleropages_formosus
ENSFHEG00000003398pabpc1l10086.977ENSSMAG00000010516pabpc1l9898.450Scophthalmus_maximus
ENSFHEG00000003398pabpc1l10087.700ENSSDUG00000014743pabpc1l10087.700Seriola_dumerili
ENSFHEG00000003398pabpc1l9786.356ENSSLDG00000006981pabpc1l9893.151Seriola_lalandi_dorsalis
ENSFHEG00000003398pabpc1l9972.425ENSSPUG00000004233PABPC1L9972.425Sphenodon_punctatus
ENSFHEG00000003398pabpc1l10078.699ENSSPAG00000017137pabpc1l10078.699Stegastes_partitus
ENSFHEG00000003398pabpc1l9968.710ENSSSCG00000007382PABPC1L9968.710Sus_scrofa
ENSFHEG00000003398pabpc1l9971.429ENSTGUG00000005114PABPC1L10071.429Taeniopygia_guttata
ENSFHEG00000003398pabpc1l9786.326ENSTRUG00000011085pabpc1l9786.326Takifugu_rubripes
ENSFHEG00000003398pabpc1l9983.762ENSTNIG00000017903pabpc1l9883.762Tetraodon_nigroviridis
ENSFHEG00000003398pabpc1l9477.397ENSTBEG00000002851PABPC1L7977.397Tupaia_belangeri
ENSFHEG00000003398pabpc1l9467.742ENSTTRG00000007618PABPC1L10067.934Tursiops_truncatus
ENSFHEG00000003398pabpc1l9967.685ENSUAMG00000017682PABPC1L9967.685Ursus_americanus
ENSFHEG00000003398pabpc1l7268.041ENSUMAG00000025436PABPC1L9273.538Ursus_maritimus
ENSFHEG00000003398pabpc1l9875.099ENSVVUG00000018939PABPC1L9975.099Vulpes_vulpes
ENSFHEG00000003398pabpc1l9970.095ENSXETG00000022831pabpc1l9970.095Xenopus_tropicalis
ENSFHEG00000003398pabpc1l10092.846ENSXCOG00000005459pabpc1l10093.215Xiphophorus_couchianus
ENSFHEG00000003398pabpc1l10094.032ENSXMAG00000017135pabpc1l10094.032Xiphophorus_maculatus

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