EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSFHEG00000003513 (Gene tree)
Gene ID: 105930709
Gene Symbol: rbm25b
Alias: fi03e10|rbm25|si:ch211-105d18.5|wu:fi03e10|zgc:56208
Full Name: RNA-binding protein 25
Gene Type: protein_coding
Species: Fundulus_heteroclitus
Status: putative
Strand: Minus strand
Length: 15829 bases
Position: chrKN811358.1:439922-455750
Accession: 105930709
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSFHEP00000002675	RRM_1	PF00076.22	3.1e-09	1	1
ENSFHEP00000002651	RRM_1	PF00076.22	3.2e-09	1	1
ENSFHEP00000002675	PWI	PF01480.17	2.9e-13	1	1
ENSFHEP00000002651	PWI	PF01480.17	3e-13	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSFHET00000011858	-	2601	XM_012869043	ENSFHEP00000002651	815 (aa)	XP_012724497	UPI000644E55C
ENSFHET00000011839	-	2620	-	ENSFHEP00000002675	801 (aa)	-	-

Gene Model

Click here to download ENSFHEG00000003513's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSFHEG00000003513's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSFHEG00000003513	rbm25b	57	68.750	ENSFHEG00000005318	rbm25a	61	68.762

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSFHEG00000003513	rbm25b	56	79.521	ENSAPOG00000017757	rbm25a	58	77.292	Acanthochromis_polyacanthus
ENSFHEG00000003513	rbm25b	59	85.319	ENSAPOG00000015321	rbm25b	58	88.936	Acanthochromis_polyacanthus
ENSFHEG00000003513	rbm25b	56	77.851	ENSACIG00000019482	rbm25a	58	75.205	Amphilophus_citrinellus
ENSFHEG00000003513	rbm25b	59	85.532	ENSACIG00000014178	rbm25b	56	85.532	Amphilophus_citrinellus
ENSFHEG00000003513	rbm25b	56	76.535	ENSAOCG00000013695	rbm25a	56	75.276	Amphiprion_ocellaris
ENSFHEG00000003513	rbm25b	99	83.040	ENSAOCG00000019308	rbm25b	56	84.255	Amphiprion_ocellaris
ENSFHEG00000003513	rbm25b	56	78.571	ENSAPEG00000007514	rbm25a	58	76.763	Amphiprion_percula
ENSFHEG00000003513	rbm25b	99	83.543	ENSAPEG00000009666	rbm25b	60	87.660	Amphiprion_percula
ENSFHEG00000003513	rbm25b	59	77.941	ENSATEG00000020676	rbm25a	75	68.119	Anabas_testudineus
ENSFHEG00000003513	rbm25b	59	89.852	ENSATEG00000017312	rbm25b	57	90.000	Anabas_testudineus
ENSFHEG00000003513	rbm25b	59	90.638	ENSACLG00000024359	rbm25b	57	90.638	Astatotilapia_calliptera
ENSFHEG00000003513	rbm25b	89	74.468	ENSACLG00000027482	rbm25a	86	73.504	Astatotilapia_calliptera
ENSFHEG00000003513	rbm25b	53	76.526	ENSAMXG00000024525	rbm25b	59	70.600	Astyanax_mexicanus
ENSFHEG00000003513	rbm25b	56	33.778	WBGene00012245	W04D2.6	86	32.911	Caenorhabditis_elegans
ENSFHEG00000003513	rbm25b	63	83.784	ENSCHOG00000008903	RBM25	63	83.099	Choloepus_hoffmanni
ENSFHEG00000003513	rbm25b	84	70.000	ENSCANG00000043874	RBM25	98	67.474	Colobus_angolensis_palliatus
ENSFHEG00000003513	rbm25b	99	83.522	ENSCSEG00000020737	rbm25b	58	84.861	Cynoglossus_semilaevis
ENSFHEG00000003513	rbm25b	57	74.837	ENSCSEG00000009430	rbm25a	61	71.630	Cynoglossus_semilaevis
ENSFHEG00000003513	rbm25b	100	89.364	ENSCVAG00000003478	rbm25b	57	89.641	Cyprinodon_variegatus
ENSFHEG00000003513	rbm25b	59	69.423	ENSCVAG00000005498	rbm25a	99	70.927	Cyprinodon_variegatus
ENSFHEG00000003513	rbm25b	63	76.046	ENSDARG00000006395	rbm25b	57	75.891	Danio_rerio
ENSFHEG00000003513	rbm25b	54	64.920	ENSDARG00000039266	rbm25a	99	92.405	Danio_rerio
ENSFHEG00000003513	rbm25b	86	69.108	ENSEEUG00000007350	RBM25	81	70.023	Erinaceus_europaeus
ENSFHEG00000003513	rbm25b	58	65.385	ENSELUG00000021847	rbm25a	53	64.768	Esox_lucius
ENSFHEG00000003513	rbm25b	99	73.780	ENSELUG00000007730	rbm25b	51	86.667	Esox_lucius
ENSFHEG00000003513	rbm25b	82	74.249	ENSGMOG00000014070	rbm25a	59	80.078	Gadus_morhua
ENSFHEG00000003513	rbm25b	86	78.667	ENSGMOG00000014097	rbm25b	63	78.667	Gadus_morhua
ENSFHEG00000003513	rbm25b	100	70.784	ENSGAFG00000018036	rbm25a	56	72.671	Gambusia_affinis
ENSFHEG00000003513	rbm25b	99	90.049	ENSGAFG00000001092	rbm25b	52	92.116	Gambusia_affinis
ENSFHEG00000003513	rbm25b	59	90.213	ENSHBUG00000018499	rbm25b	57	90.213	Haplochromis_burtoni
ENSFHEG00000003513	rbm25b	56	78.289	ENSHBUG00000016908	rbm25a	57	76.471	Haplochromis_burtoni
ENSFHEG00000003513	rbm25b	100	76.329	ENSHCOG00000000142	rbm25b	57	78.587	Hippocampus_comes
ENSFHEG00000003513	rbm25b	58	67.568	ENSIPUG00000021051	rbm25b	56	74.160	Ictalurus_punctatus
ENSFHEG00000003513	rbm25b	57	91.028	ENSKMAG00000018826	rbm25b	57	90.638	Kryptolebias_marmoratus
ENSFHEG00000003513	rbm25b	60	71.315	ENSKMAG00000016242	rbm25a	57	73.434	Kryptolebias_marmoratus
ENSFHEG00000003513	rbm25b	100	87.010	ENSLBEG00000010667	rbm25b	58	88.085	Labrus_bergylta
ENSFHEG00000003513	rbm25b	59	68.454	ENSLACG00000011845	RBM25	54	71.849	Latimeria_chalumnae
ENSFHEG00000003513	rbm25b	59	70.772	ENSLOCG00000014196	rbm25b	55	71.933	Lepisosteus_oculatus
ENSFHEG00000003513	rbm25b	85	73.853	ENSMAMG00000000165	rbm25a	60	68.635	Mastacembelus_armatus
ENSFHEG00000003513	rbm25b	58	87.553	ENSMAMG00000004524	rbm25b	57	88.960	Mastacembelus_armatus
ENSFHEG00000003513	rbm25b	56	78.289	ENSMZEG00005011183	rbm25a	57	76.471	Maylandia_zebra
ENSFHEG00000003513	rbm25b	59	90.638	ENSMZEG00005001453	rbm25b	57	90.638	Maylandia_zebra
ENSFHEG00000003513	rbm25b	54	72.912	ENSMGAG00000011707	RBM25	52	72.824	Meleagris_gallopavo
ENSFHEG00000003513	rbm25b	100	89.934	ENSMMOG00000015545	rbm25b	63	89.530	Mola_mola
ENSFHEG00000003513	rbm25b	59	74.895	ENSMMOG00000009065	rbm25a	59	70.732	Mola_mola
ENSFHEG00000003513	rbm25b	60	88.518	ENSMALG00000020441	rbm25b	89	89.384	Monopterus_albus
ENSFHEG00000003513	rbm25b	55	67.347	ENSMLUG00000024167	-	52	65.672	Myotis_lucifugus
ENSFHEG00000003513	rbm25b	56	78.289	ENSNBRG00000003761	rbm25a	57	76.200	Neolamprologus_brichardi
ENSFHEG00000003513	rbm25b	58	82.766	ENSNBRG00000022192	rbm25b	56	82.553	Neolamprologus_brichardi
ENSFHEG00000003513	rbm25b	59	86.229	ENSORLG00000011874	rbm25b	57	86.383	Oryzias_latipes
ENSFHEG00000003513	rbm25b	59	86.229	ENSORLG00020016422	rbm25b	57	86.354	Oryzias_latipes_hni
ENSFHEG00000003513	rbm25b	59	86.441	ENSORLG00015011269	rbm25b	57	86.596	Oryzias_latipes_hsok
ENSFHEG00000003513	rbm25b	59	86.596	ENSOMEG00000023172	rbm25b	57	86.567	Oryzias_melastigma
ENSFHEG00000003513	rbm25b	84	68.502	ENSOMEG00000022138	rbm25a	61	71.233	Oryzias_melastigma
ENSFHEG00000003513	rbm25b	59	73.529	ENSPKIG00000003203	rbm25b	58	74.004	Paramormyrops_kingsleyae
ENSFHEG00000003513	rbm25b	54	64.269	ENSPMGG00000001791	rbm25a	100	64.786	Periophthalmus_magnuspinnatus
ENSFHEG00000003513	rbm25b	59	84.855	ENSPMGG00000015740	rbm25b	58	85.654	Periophthalmus_magnuspinnatus
ENSFHEG00000003513	rbm25b	59	91.875	ENSPFOG00000018808	rbm25b	58	91.909	Poecilia_formosa
ENSFHEG00000003513	rbm25b	100	72.043	ENSPLAG00000018338	rbm25a	56	71.849	Poecilia_latipinna
ENSFHEG00000003513	rbm25b	100	71.685	ENSPMEG00000024470	rbm25a	63	69.333	Poecilia_mexicana
ENSFHEG00000003513	rbm25b	59	91.875	ENSPMEG00000019161	rbm25b	58	91.909	Poecilia_mexicana
ENSFHEG00000003513	rbm25b	59	90.890	ENSPREG00000008522	rbm25b	58	91.925	Poecilia_reticulata
ENSFHEG00000003513	rbm25b	56	75.492	ENSPREG00000009228	rbm25a	60	70.600	Poecilia_reticulata
ENSFHEG00000003513	rbm25b	58	74.468	ENSPNYG00000022596	rbm25a	54	73.504	Pundamilia_nyererei
ENSFHEG00000003513	rbm25b	58	82.979	ENSPNYG00000023303	rbm25b	56	82.766	Pundamilia_nyererei
ENSFHEG00000003513	rbm25b	58	75.309	ENSPNAG00000012024	rbm25b	57	74.841	Pygocentrus_nattereri
ENSFHEG00000003513	rbm25b	55	71.267	ENSRNOG00000002871	Rbm25l1	54	70.625	Rattus_norvegicus
ENSFHEG00000003513	rbm25b	54	66.966	ENSRROG00000035556	RBM25	96	69.487	Rhinopithecus_roxellana
ENSFHEG00000003513	rbm25b	61	79.832	ENSSBOG00000034153	RBM25	57	52.979	Saimiri_boliviensis_boliviensis
ENSFHEG00000003513	rbm25b	58	73.830	ENSSFOG00015007093	rbm25	58	73.457	Scleropages_formosus
ENSFHEG00000003513	rbm25b	59	78.197	ENSSMAG00000009745	rbm25a	58	76.987	Scophthalmus_maximus
ENSFHEG00000003513	rbm25b	59	84.342	ENSSMAG00000002520	rbm25b	58	84.810	Scophthalmus_maximus
ENSFHEG00000003513	rbm25b	56	80.131	ENSSDUG00000017984	rbm25a	59	77.871	Seriola_dumerili
ENSFHEG00000003513	rbm25b	57	90.153	ENSSLDG00000024573	rbm25b	99	90.153	Seriola_lalandi_dorsalis
ENSFHEG00000003513	rbm25b	56	80.131	ENSSLDG00000010342	rbm25a	58	77.871	Seriola_lalandi_dorsalis
ENSFHEG00000003513	rbm25b	56	76.471	ENSSPAG00000011114	rbm25a	58	75.665	Stegastes_partitus
ENSFHEG00000003513	rbm25b	100	79.952	ENSSPAG00000016168	rbm25b	58	88.960	Stegastes_partitus
ENSFHEG00000003513	rbm25b	59	88.559	ENSTRUG00000017964	rbm25b	58	88.723	Takifugu_rubripes
ENSFHEG00000003513	rbm25b	58	73.207	ENSTRUG00000003076	rbm25a	60	71.308	Takifugu_rubripes
ENSFHEG00000003513	rbm25b	57	80.097	ENSTBEG00000010538	-	55	80.097	Tupaia_belangeri
ENSFHEG00000003513	rbm25b	54	64.706	ENSUAMG00000007707	RBM25	100	66.477	Ursus_americanus
ENSFHEG00000003513	rbm25b	51	65.126	ENSVPAG00000009052	RBM25	79	71.429	Vicugna_pacos
ENSFHEG00000003513	rbm25b	97	61.946	ENSXETG00000021857	rbm25	56	72.128	Xenopus_tropicalis
ENSFHEG00000003513	rbm25b	100	83.475	ENSXCOG00000002222	rbm25b	56	77.848	Xiphophorus_couchianus
ENSFHEG00000003513	rbm25b	98	72.333	ENSXCOG00000004043	RBM25	61	67.315	Xiphophorus_couchianus
ENSFHEG00000003513	rbm25b	100	90.887	ENSXMAG00000017290	rbm25b	58	90.909	Xiphophorus_maculatus
ENSFHEG00000003513	rbm25b	100	67.213	ENSXMAG00000009077	RBM25	60	71.820	Xiphophorus_maculatus