EuRBPDB

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  • Description
  • RBDs
  • Transcripts
  • Gene Model
  • PPI
  • Orthologs
Description
Ensembl ID
ENSFHEG00000003580 (Gene tree)
Gene ID
105934530
Gene Symbol
rpa1
Alias
wu:fi14b08|zgc:55337|zgc:77092
Full Name
replication protein A1
Gene Type
protein_coding
Species
Fundulus_heteroclitus
Status
putative
Strand
Minus strand
Length
32428 bases
Position
chrKN811433.1:821592-854019
Accession
105934530
RBP type
canonical RBP
Summary
-
RNA binding domains(RBDs)
Protein IDDomain Pfam IDE-value Domain number Total number
ENSFHEP00000022905tRNA_anti-codonPF01336.252.9e-1211
Transcripts
Transcript IDNameLengthRefSeq ID Protein IDLengthRefSeq IDUniportKB ID
ENSFHET00000011678-3247XM_012874570ENSFHEP00000022905604 (aa)XP_012730024UPI000644BF0D
Gene Model
Click here to download ENSFHEG00000003580's gene model file
Protein-Protein Interaction (PPI)

Clik here to download ENSFHEG00000003580's network
Orthologs
Ensembl IDGene SymbolCoverageIdentiy OrthologGene SymbolCoverageIdentiy Species
ENSFHEG00000003580rpa19567.028ENSAPOG00000019409RPA18367.028Acanthochromis_polyacanthus
ENSFHEG00000003580rpa19983.278ENSAPOG00000011658rpa19983.278Acanthochromis_polyacanthus
ENSFHEG00000003580rpa19961.513ENSAMEG00000007706RPA19861.513Ailuropoda_melanoleuca
ENSFHEG00000003580rpa19563.032ENSACIG00000012881RPA19963.032Amphilophus_citrinellus
ENSFHEG00000003580rpa19674.828ENSACIG00000007277rpa19974.828Amphilophus_citrinellus
ENSFHEG00000003580rpa19959.077ENSAOCG00000009003RPA19959.351Amphiprion_ocellaris
ENSFHEG00000003580rpa19983.416ENSAOCG00000023376rpa19983.416Amphiprion_ocellaris
ENSFHEG00000003580rpa19983.250ENSAPEG00000008634rpa19983.250Amphiprion_percula
ENSFHEG00000003580rpa19667.672ENSAPEG00000019132RPA19957.251Amphiprion_percula
ENSFHEG00000003580rpa19959.259ENSATEG00000006443RPA19959.259Anabas_testudineus
ENSFHEG00000003580rpa19581.913ENSATEG00000022024rpa110081.913Anabas_testudineus
ENSFHEG00000003580rpa19865.049ENSAPLG00000012442RPA19065.049Anas_platyrhynchos
ENSFHEG00000003580rpa19956.908ENSACAG00000014490RPA19856.908Anolis_carolinensis
ENSFHEG00000003580rpa19662.818ENSANAG00000023456RPA19862.818Aotus_nancymaae
ENSFHEG00000003580rpa19483.774ENSACLG00000006640rpa19983.774Astatotilapia_calliptera
ENSFHEG00000003580rpa19962.362ENSACLG00000005223RPA19962.362Astatotilapia_calliptera
ENSFHEG00000003580rpa19975.249ENSAMXG00000008418rpa19975.622Astyanax_mexicanus
ENSFHEG00000003580rpa19960.912ENSBTAG00000009711RPA19960.912Bos_taurus
ENSFHEG00000003580rpa19661.121ENSCJAG00000001848RPA19960.855Callithrix_jacchus
ENSFHEG00000003580rpa19961.576ENSCAFG00000019249RPA19961.741Canis_familiaris
ENSFHEG00000003580rpa19961.576ENSCAFG00020009847RPA19961.741Canis_lupus_dingo
ENSFHEG00000003580rpa19960.714ENSCHIG00000026308RPA19960.877Capra_hircus
ENSFHEG00000003580rpa19961.248ENSTSYG00000003482-9961.248Carlito_syrichta
ENSFHEG00000003580rpa19962.007ENSCPOG00000000035RPA19962.007Cavia_porcellus
ENSFHEG00000003580rpa19651.783ENSCCAG00000010981RPA19552.632Cebus_capucinus
ENSFHEG00000003580rpa19958.086ENSCLAG00000015045-9958.086Chinchilla_lanigera
ENSFHEG00000003580rpa19961.513ENSCLAG00000005185-9961.513Chinchilla_lanigera
ENSFHEG00000003580rpa19951.967ENSCSAG00000013833RPA19952.467Chlorocebus_sabaeus
ENSFHEG00000003580rpa17169.585ENSCHOG00000009454-9969.585Choloepus_hoffmanni
ENSFHEG00000003580rpa19561.130ENSCHOG00000013540-9961.130Choloepus_hoffmanni
ENSFHEG00000003580rpa19962.706ENSCPBG00000020377RPA19963.428Chrysemys_picta_bellii
ENSFHEG00000003580rpa19943.234ENSCING00000023482-9943.234Ciona_intestinalis
ENSFHEG00000003580rpa19662.436ENSCANG00000030911RPA19762.436Colobus_angolensis_palliatus
ENSFHEG00000003580rpa19961.075ENSCGRG00001008197Rpa19961.075Cricetulus_griseus_chok1gshd
ENSFHEG00000003580rpa18163.043ENSCGRG00000000582Rpa19963.043Cricetulus_griseus_crigri
ENSFHEG00000003580rpa19956.160ENSCSEG00000012726RPA19957.216Cynoglossus_semilaevis
ENSFHEG00000003580rpa110077.941ENSCSEG00000013066rpa110077.941Cynoglossus_semilaevis
ENSFHEG00000003580rpa110087.234ENSCVAG00000019431rpa110087.398Cyprinodon_variegatus
ENSFHEG00000003580rpa19556.086ENSCVAG00000013446-9655.901Cyprinodon_variegatus
ENSFHEG00000003580rpa19973.090ENSDARG00000003938rpa19973.090Danio_rerio
ENSFHEG00000003580rpa19663.158ENSDNOG00000017218RPA19663.158Dasypus_novemcinctus
ENSFHEG00000003580rpa19962.336ENSDORG00000006199Rpa19962.336Dipodomys_ordii
ENSFHEG00000003580rpa19941.408FBgn0010173RpA-709942.062Drosophila_melanogaster
ENSFHEG00000003580rpa18274.737ENSETEG00000017608RPA18274.737Echinops_telfairi
ENSFHEG00000003580rpa19662.906ENSEASG00005009372RPA19961.754Equus_asinus_asinus
ENSFHEG00000003580rpa19961.513ENSECAG00000023886RPA19961.513Equus_caballus
ENSFHEG00000003580rpa16969.451ENSEEUG00000002186-6869.451Erinaceus_europaeus
ENSFHEG00000003580rpa19978.607ENSELUG00000021071rpa19978.607Esox_lucius
ENSFHEG00000003580rpa18863.060ENSELUG00000006136RPA19963.060Esox_lucius
ENSFHEG00000003580rpa19961.803ENSFCAG00000006306RPA19961.803Felis_catus
ENSFHEG00000003580rpa19962.541ENSFALG00000006575RPA19962.541Ficedula_albicollis
ENSFHEG00000003580rpa19962.336ENSFDAG00000007720RPA19962.336Fukomys_damarensis
ENSFHEG00000003580rpa19975.292ENSGMOG00000010382rpa19975.292Gadus_morhua
ENSFHEG00000003580rpa19961.653ENSGALG00000003072RPA19961.653Gallus_gallus
ENSFHEG00000003580rpa19957.887ENSGAFG00000020953RPA19957.774Gambusia_affinis
ENSFHEG00000003580rpa110089.091ENSGAFG00000012916rpa110089.091Gambusia_affinis
ENSFHEG00000003580rpa110080.464ENSGACG00000010856rpa110080.464Gasterosteus_aculeatus
ENSFHEG00000003580rpa19962.211ENSGAGG00000013611RPA19862.211Gopherus_agassizii
ENSFHEG00000003580rpa19961.960ENSGGOG00000014186RPA19961.960Gorilla_gorilla
ENSFHEG00000003580rpa19556.899ENSHBUG00000009348RPA19856.899Haplochromis_burtoni
ENSFHEG00000003580rpa19985.762ENSHBUG00000017773rpa19985.762Haplochromis_burtoni
ENSFHEG00000003580rpa19961.311ENSHGLG00000008846RPA19961.513Heterocephalus_glaber_female
ENSFHEG00000003580rpa19952.467ENSHGLG00100002005-9952.796Heterocephalus_glaber_male
ENSFHEG00000003580rpa19961.311ENSHGLG00100017755-9961.513Heterocephalus_glaber_male
ENSFHEG00000003580rpa19958.059ENSHGLG00100000799-9958.059Heterocephalus_glaber_male
ENSFHEG00000003580rpa19445.026ENSHCOG00000000351RPA19344.930Hippocampus_comes
ENSFHEG00000003580rpa110074.878ENSHCOG00000001401rpa110074.878Hippocampus_comes
ENSFHEG00000003580rpa19974.135ENSIPUG00000004400rpa19974.135Ictalurus_punctatus
ENSFHEG00000003580rpa19161.160ENSSTOG00000022475RPA19561.160Ictidomys_tridecemlineatus
ENSFHEG00000003580rpa19662.712ENSJJAG00000000876Rpa19862.712Jaculus_jaculus
ENSFHEG00000003580rpa110080.844ENSKMAG00000005605rpa110081.169Kryptolebias_marmoratus
ENSFHEG00000003580rpa19960.131ENSKMAG00000000234RPA19960.131Kryptolebias_marmoratus
ENSFHEG00000003580rpa19982.149ENSLBEG00000021604rpa19982.149Labrus_bergylta
ENSFHEG00000003580rpa19470.183ENSLBEG00000002281RPA18170.183Labrus_bergylta
ENSFHEG00000003580rpa18060.327ENSLACG00000007210RPA19960.327Latimeria_chalumnae
ENSFHEG00000003580rpa19970.481ENSLOCG00000006397rpa19970.481Lepisosteus_oculatus
ENSFHEG00000003580rpa19958.842ENSLAFG00000015354RPA19958.842Loxodonta_africana
ENSFHEG00000003580rpa18058.871ENSMFAG00000036138-9859.514Macaca_fascicularis
ENSFHEG00000003580rpa19956.716ENSMMUG00000002442-9956.716Macaca_mulatta
ENSFHEG00000003580rpa19661.929ENSMMUG00000011604-9762.479Macaca_mulatta
ENSFHEG00000003580rpa18564.222ENSMNEG00000029837-9564.222Macaca_nemestrina
ENSFHEG00000003580rpa19561.565ENSMNEG00000031632-9862.116Macaca_nemestrina
ENSFHEG00000003580rpa19658.754ENSMLEG00000038768-9859.291Mandrillus_leucophaeus
ENSFHEG00000003580rpa19068.605ENSMAMG00000020097RPA19956.972Mastacembelus_armatus
ENSFHEG00000003580rpa110083.636ENSMAMG00000017993rpa110083.636Mastacembelus_armatus
ENSFHEG00000003580rpa19985.430ENSMZEG00005007551rpa19985.430Maylandia_zebra
ENSFHEG00000003580rpa19962.362ENSMZEG00005024731RPA19962.362Maylandia_zebra
ENSFHEG00000003580rpa19860.963ENSMGAG00000005315RPA19860.963Meleagris_gallopavo
ENSFHEG00000003580rpa19662.775ENSMAUG00000010474Rpa19862.775Mesocricetus_auratus
ENSFHEG00000003580rpa19961.349ENSMICG00000012867RPA19961.678Microcebus_murinus
ENSFHEG00000003580rpa19960.656ENSMOCG00000013019Rpa19960.656Microtus_ochrogaster
ENSFHEG00000003580rpa110080.331ENSMMOG00000014292rpa110082.564Mola_mola
ENSFHEG00000003580rpa19862.375ENSMMOG00000010868RPA19862.375Mola_mola
ENSFHEG00000003580rpa19962.029ENSMODG00000010549RPA19962.029Monodelphis_domestica
ENSFHEG00000003580rpa110083.306ENSMALG00000011453rpa110083.306Monopterus_albus
ENSFHEG00000003580rpa19467.834ENSMALG00000001208RPA17967.834Monopterus_albus
ENSFHEG00000003580rpa19961.928MGP_CAROLIEiJ_G0016734Rpa19961.928Mus_caroli
ENSFHEG00000003580rpa19960.356ENSMUSG00000000751Rpa19960.356Mus_musculus
ENSFHEG00000003580rpa19961.951MGP_PahariEiJ_G0017871Rpa19961.951Mus_pahari
ENSFHEG00000003580rpa19960.258MGP_SPRETEiJ_G0017577Rpa19960.258Mus_spretus
ENSFHEG00000003580rpa19961.248ENSMPUG00000013119RPA19961.248Mustela_putorius_furo
ENSFHEG00000003580rpa19661.149ENSMLUG00000006113RPA19561.149Myotis_lucifugus
ENSFHEG00000003580rpa19563.077ENSNGAG00000004522Rpa19363.077Nannospalax_galili
ENSFHEG00000003580rpa19583.421ENSNBRG00000020595rpa19983.421Neolamprologus_brichardi
ENSFHEG00000003580rpa19860.434ENSNBRG00000009672RPA19760.434Neolamprologus_brichardi
ENSFHEG00000003580rpa19961.702ENSNLEG00000017149RPA19961.842Nomascus_leucogenys
ENSFHEG00000003580rpa19654.068ENSMEUG00000006714RPA19754.068Notamacropus_eugenii
ENSFHEG00000003580rpa19561.745ENSODEG00000009038RPA19661.745Octodon_degus
ENSFHEG00000003580rpa19984.176ENSONIG00000013135rpa19984.176Oreochromis_niloticus
ENSFHEG00000003580rpa19763.636ENSOANG00000010880RPA19863.636Ornithorhynchus_anatinus
ENSFHEG00000003580rpa19959.161ENSOCUG00000001504RPA19959.161Oryctolagus_cuniculus
ENSFHEG00000003580rpa19982.392ENSORLG00000004856rpa19982.392Oryzias_latipes
ENSFHEG00000003580rpa19956.595ENSORLG00000003368RPA19956.595Oryzias_latipes
ENSFHEG00000003580rpa19953.916ENSORLG00020015284RPA19953.916Oryzias_latipes_hni
ENSFHEG00000003580rpa19982.392ENSORLG00020008980rpa19982.392Oryzias_latipes_hni
ENSFHEG00000003580rpa19982.392ENSORLG00015013982rpa19982.392Oryzias_latipes_hsok
ENSFHEG00000003580rpa19957.031ENSORLG00015020383RPA19957.031Oryzias_latipes_hsok
ENSFHEG00000003580rpa16865.542ENSORLG00015005867-9565.542Oryzias_latipes_hsok
ENSFHEG00000003580rpa19558.020ENSOMEG00000011040RPA19958.020Oryzias_melastigma
ENSFHEG00000003580rpa19979.402ENSOMEG00000004704rpa19979.402Oryzias_melastigma
ENSFHEG00000003580rpa17574.576ENSOGAG00000029379-9774.576Otolemur_garnettii
ENSFHEG00000003580rpa19961.020ENSOGAG00000005581-9961.020Otolemur_garnettii
ENSFHEG00000003580rpa19960.714ENSOARG00000014479RPA19960.877Ovis_aries
ENSFHEG00000003580rpa19961.803ENSPPAG00000039680RPA19962.007Pan_paniscus
ENSFHEG00000003580rpa19961.475ENSPPRG00000011807RPA19961.475Panthera_pardus
ENSFHEG00000003580rpa19961.475ENSPTIG00000007898RPA19961.475Panthera_tigris_altaica
ENSFHEG00000003580rpa19962.131ENSPTRG00000008539RPA19962.336Pan_troglodytes
ENSFHEG00000003580rpa19961.311ENSPANG00000024592RPA19961.842Papio_anubis
ENSFHEG00000003580rpa19474.737ENSPKIG00000008053rpa19374.737Paramormyrops_kingsleyae
ENSFHEG00000003580rpa19663.621ENSPSIG00000015617RPA19863.621Pelodiscus_sinensis
ENSFHEG00000003580rpa19579.896ENSPMGG00000011589rpa19879.896Periophthalmus_magnuspinnatus
ENSFHEG00000003580rpa19660.069ENSPMGG00000000543RPA19961.676Periophthalmus_magnuspinnatus
ENSFHEG00000003580rpa19962.069ENSPEMG00000021061Rpa19962.069Peromyscus_maniculatus_bairdii
ENSFHEG00000003580rpa19961.866ENSPCIG00000019049RPA19962.193Phascolarctos_cinereus
ENSFHEG00000003580rpa110090.248ENSPFOG00000003987rpa110090.248Poecilia_formosa
ENSFHEG00000003580rpa19457.980ENSPLAG00000008844-9657.980Poecilia_latipinna
ENSFHEG00000003580rpa110090.083ENSPLAG00000004984rpa110090.083Poecilia_latipinna
ENSFHEG00000003580rpa110090.413ENSPMEG00000020602rpa110090.413Poecilia_mexicana
ENSFHEG00000003580rpa19457.818ENSPMEG00000003627-9657.818Poecilia_mexicana
ENSFHEG00000003580rpa19381.818ENSPREG00000010174rpa19581.673Poecilia_reticulata
ENSFHEG00000003580rpa19169.178ENSPREG00000010119RPA19955.804Poecilia_reticulata
ENSFHEG00000003580rpa19961.047ENSPCOG00000001799RPA19961.047Propithecus_coquereli
ENSFHEG00000003580rpa19960.884ENSPVAG00000002149RPA19960.884Pteropus_vampyrus
ENSFHEG00000003580rpa19985.762ENSPNYG00000016316rpa19985.762Pundamilia_nyererei
ENSFHEG00000003580rpa19962.205ENSPNYG00000024165RPA19962.205Pundamilia_nyererei
ENSFHEG00000003580rpa19967.388ENSPNAG00000008599rpa19668.750Pygocentrus_nattereri
ENSFHEG00000003580rpa19669.417ENSRNOG00000003123Rpa19962.562Rattus_norvegicus
ENSFHEG00000003580rpa19961.349ENSRBIG00000036587RPA19961.349Rhinopithecus_bieti
ENSFHEG00000003580rpa19956.579ENSRROG00000043278RPA19956.579Rhinopithecus_roxellana
ENSFHEG00000003580rpa19431.399YAR007CRFA19331.399Saccharomyces_cerevisiae
ENSFHEG00000003580rpa19162.657ENSSBOG00000030233RPA19663.555Saimiri_boliviensis_boliviensis
ENSFHEG00000003580rpa19663.069ENSSHAG00000007969RPA19563.406Sarcophilus_harrisii
ENSFHEG00000003580rpa19977.355ENSSFOG00015005362rpa19277.355Scleropages_formosus
ENSFHEG00000003580rpa19957.230ENSSMAG00000019746RPA19957.230Scophthalmus_maximus
ENSFHEG00000003580rpa19070.370ENSSDUG00000016358RPA18170.252Seriola_dumerili
ENSFHEG00000003580rpa110084.463ENSSDUG00000011949rpa110084.463Seriola_dumerili
ENSFHEG00000003580rpa110084.628ENSSLDG00000011806rpa110084.628Seriola_lalandi_dorsalis
ENSFHEG00000003580rpa19952.933ENSSLDG00000020784RPA19952.933Seriola_lalandi_dorsalis
ENSFHEG00000003580rpa18675.758ENSSARG00000007506RPA18775.758Sorex_araneus
ENSFHEG00000003580rpa19761.395ENSSPUG00000007223RPA19861.395Sphenodon_punctatus
ENSFHEG00000003580rpa110084.298ENSSPAG00000009903rpa110084.298Stegastes_partitus
ENSFHEG00000003580rpa19862.963ENSSPAG00000011165RPA19862.963Stegastes_partitus
ENSFHEG00000003580rpa19960.197ENSSSCG00000017822RPA19862.121Sus_scrofa
ENSFHEG00000003580rpa19962.109ENSTGUG00000005775RPA19962.109Taeniopygia_guttata
ENSFHEG00000003580rpa19980.897ENSTRUG00000003616rpa19980.897Takifugu_rubripes
ENSFHEG00000003580rpa19969.393ENSTRUG00000000405RPA19069.425Takifugu_rubripes
ENSFHEG00000003580rpa110082.219ENSTNIG00000016199rpa19982.488Tetraodon_nigroviridis
ENSFHEG00000003580rpa17269.108ENSTBEG00000002709RPA17369.108Tupaia_belangeri
ENSFHEG00000003580rpa19961.075ENSTTRG00000001169RPA19961.364Tursiops_truncatus
ENSFHEG00000003580rpa19563.830ENSUAMG00000015676RPA19571.154Ursus_americanus
ENSFHEG00000003580rpa19961.184ENSUMAG00000009328RPA19961.639Ursus_maritimus
ENSFHEG00000003580rpa19959.574ENSVPAG00000009443RPA19959.574Vicugna_pacos
ENSFHEG00000003580rpa19961.047ENSVVUG00000021715RPA19961.211Vulpes_vulpes
ENSFHEG00000003580rpa19965.620ENSXETG00000013538rpa19966.116Xenopus_tropicalis
ENSFHEG00000003580rpa19560.517ENSXCOG00000009899-9960.517Xiphophorus_couchianus
ENSFHEG00000003580rpa19388.099ENSXCOG00000010068rpa19488.099Xiphophorus_couchianus
ENSFHEG00000003580rpa19268.721ENSXMAG00000010333RPA17968.721Xiphophorus_maculatus
ENSFHEG00000003580rpa110088.926ENSXMAG00000004102rpa110088.988Xiphophorus_maculatus

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