EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSFHEG00000003605 (Gene tree)
Gene ID: 105917914
Gene Symbol: -
Alias: -
Full Name: heterogeneous nuclear ribonucleoprotein C-like
Gene Type: protein_coding
Species: Fundulus_heteroclitus
Status: putative
Strand: Plus strand
Length: 5371 bases
Position: chrKN805808.1:36275-41645
Accession: 105917914
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSFHEP00000002775	RRM_1	PF00076.22	3.9e-13	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSFHET00000011669	-	2306	XM_021310781	ENSFHEP00000002775	304 (aa)	XP_021166456	UPI0006449A42

Gene Model

Click here to download ENSFHEG00000003605's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSFHEG00000003605's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSFHEG00000003605	-	84	71.795	ENSFHEG00000007278	-	90	70.100
ENSFHEG00000003605	-	74	49.339	ENSFHEG00000018618	raly	83	50.000

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSFHEG00000003605	-	87	50.185	ENSG00000184672	RALYL	91	76.623	Homo_sapiens
ENSFHEG00000003605	-	93	86.268	ENSAPOG00000006963	hnrnpc	92	86.972	Acanthochromis_polyacanthus
ENSFHEG00000003605	-	90	87.956	ENSACIG00000000270	-	90	88.519	Amphilophus_citrinellus
ENSFHEG00000003605	-	84	76.357	ENSACIG00000016568	-	95	72.830	Amphilophus_citrinellus
ENSFHEG00000003605	-	83	75.984	ENSAOCG00000021616	-	87	75.704	Amphiprion_ocellaris
ENSFHEG00000003605	-	93	85.915	ENSAOCG00000003896	-	92	86.620	Amphiprion_ocellaris
ENSFHEG00000003605	-	93	85.915	ENSAPEG00000001489	-	92	86.620	Amphiprion_percula
ENSFHEG00000003605	-	84	76.744	ENSAPEG00000019962	-	88	76.173	Amphiprion_percula
ENSFHEG00000003605	-	93	85.915	ENSATEG00000011734	-	92	86.620	Anabas_testudineus
ENSFHEG00000003605	-	86	76.404	ENSATEG00000018006	-	94	72.932	Anabas_testudineus
ENSFHEG00000003605	-	71	51.293	ENSAPLG00000015574	RALYL	78	53.247	Anas_platyrhynchos
ENSFHEG00000003605	-	73	49.372	ENSACAG00000028464	RALYL	78	50.213	Anolis_carolinensis
ENSFHEG00000003605	-	87	50.730	ENSANAG00000023383	RALYL	94	51.111	Aotus_nancymaae
ENSFHEG00000003605	-	88	74.170	ENSACLG00000005707	-	92	76.923	Astatotilapia_calliptera
ENSFHEG00000003605	-	93	87.324	ENSACLG00000000995	-	92	87.324	Astatotilapia_calliptera
ENSFHEG00000003605	-	95	85.417	ENSACLG00000013636	-	95	86.268	Astatotilapia_calliptera
ENSFHEG00000003605	-	69	73.934	ENSAMXG00000042946	hnrnpc	97	72.917	Astyanax_mexicanus
ENSFHEG00000003605	-	86	76.154	ENSAMXG00000034915	zgc:55733	91	75.094	Astyanax_mexicanus
ENSFHEG00000003605	-	87	50.185	ENSCJAG00000000402	RALYL	94	51.111	Callithrix_jacchus
ENSFHEG00000003605	-	87	46.809	ENSCPOG00000012314	RALYL	93	48.214	Cavia_porcellus
ENSFHEG00000003605	-	87	51.095	ENSCCAG00000025003	RALYL	75	76.623	Cebus_capucinus
ENSFHEG00000003605	-	87	50.185	ENSCATG00000042145	RALYL	94	51.111	Cercocebus_atys
ENSFHEG00000003605	-	73	51.261	ENSCLAG00000005228	RALYL	77	53.680	Chinchilla_lanigera
ENSFHEG00000003605	-	69	51.101	ENSCHOG00000013228	RALYL	74	52.212	Choloepus_hoffmanni
ENSFHEG00000003605	-	87	50.185	ENSCANG00000039144	RALYL	94	51.111	Colobus_angolensis_palliatus
ENSFHEG00000003605	-	73	50.628	ENSCGRG00001009241	Ralyl	77	54.077	Cricetulus_griseus_chok1gshd
ENSFHEG00000003605	-	78	75.934	ENSCSEG00000021349	-	84	72.593	Cynoglossus_semilaevis
ENSFHEG00000003605	-	71	75.688	ENSCSEG00000019769	-	72	74.766	Cynoglossus_semilaevis
ENSFHEG00000003605	-	90	77.007	ENSCVAG00000002797	-	91	76.667	Cyprinodon_variegatus
ENSFHEG00000003605	-	83	76.562	ENSCVAG00000016981	-	87	73.611	Cyprinodon_variegatus
ENSFHEG00000003605	-	79	73.663	ENSDARG00000053810	hnrnpc	86	71.841	Danio_rerio
ENSFHEG00000003605	-	92	74.552	ENSDARG00000103845	zgc:55733	94	74.046	Danio_rerio
ENSFHEG00000003605	-	73	51.464	ENSDORG00000003721	Ralyl	77	54.936	Dipodomys_ordii
ENSFHEG00000003605	-	54	56.000	ENSETEG00000014028	RALYL	80	60.759	Echinops_telfairi
ENSFHEG00000003605	-	70	48.444	ENSEBUG00000012363	hnrnpc	65	49.099	Eptatretus_burgeri
ENSFHEG00000003605	-	74	46.491	ENSEBUG00000006049	RALYL	93	39.711	Eptatretus_burgeri
ENSFHEG00000003605	-	73	51.883	ENSEEUG00000007202	RALYL	80	54.622	Erinaceus_europaeus
ENSFHEG00000003605	-	86	74.627	ENSELUG00000004132	-	93	76.978	Esox_lucius
ENSFHEG00000003605	-	79	78.039	ENSELUG00000007714	-	96	75.000	Esox_lucius
ENSFHEG00000003605	-	69	56.481	ENSFALG00000008647	RALYL	96	57.674	Ficedula_albicollis
ENSFHEG00000003605	-	73	53.509	ENSGALG00000036938	RALYL	76	53.247	Gallus_gallus
ENSFHEG00000003605	-	93	89.085	ENSGAFG00000020486	-	93	89.085	Gambusia_affinis
ENSFHEG00000003605	-	84	75.581	ENSGAFG00000020992	-	98	68.978	Gambusia_affinis
ENSFHEG00000003605	-	72	67.265	ENSGACG00000018932	-	85	70.423	Gasterosteus_aculeatus
ENSFHEG00000003605	-	88	74.170	ENSGACG00000017772	-	99	75.465	Gasterosteus_aculeatus
ENSFHEG00000003605	-	87	50.185	ENSGGOG00000000841	RALYL	94	51.111	Gorilla_gorilla
ENSFHEG00000003605	-	93	87.676	ENSHBUG00000018342	-	92	87.676	Haplochromis_burtoni
ENSFHEG00000003605	-	88	74.539	ENSHBUG00000010527	-	87	76.596	Haplochromis_burtoni
ENSFHEG00000003605	-	73	50.840	ENSHGLG00000004866	RALYL	77	54.310	Heterocephalus_glaber_female
ENSFHEG00000003605	-	73	50.840	ENSHGLG00100017480	RALYL	77	54.310	Heterocephalus_glaber_male
ENSFHEG00000003605	-	85	72.426	ENSHCOG00000012333	hnrnpc	95	70.508	Hippocampus_comes
ENSFHEG00000003605	-	85	77.220	ENSIPUG00000011271	hnrnpc	97	79.464	Ictalurus_punctatus
ENSFHEG00000003605	-	86	75.000	ENSIPUG00000008666	zgc:55733	93	80.465	Ictalurus_punctatus
ENSFHEG00000003605	-	73	51.046	ENSSTOG00000012583	RALYL	78	54.936	Ictidomys_tridecemlineatus
ENSFHEG00000003605	-	93	85.816	ENSKMAG00000011170	-	91	86.268	Kryptolebias_marmoratus
ENSFHEG00000003605	-	83	75.197	ENSKMAG00000018265	-	86	75.445	Kryptolebias_marmoratus
ENSFHEG00000003605	-	90	77.305	ENSLBEG00000024418	-	91	75.540	Labrus_bergylta
ENSFHEG00000003605	-	88	81.481	ENSLBEG00000006979	-	91	81.481	Labrus_bergylta
ENSFHEG00000003605	-	86	75.285	ENSLBEG00000006193	-	86	75.986	Labrus_bergylta
ENSFHEG00000003605	-	87	69.259	ENSLOCG00000002560	hnrnpc	93	72.364	Lepisosteus_oculatus
ENSFHEG00000003605	-	87	50.185	ENSMNEG00000033288	RALYL	94	51.111	Macaca_nemestrina
ENSFHEG00000003605	-	87	50.185	ENSMLEG00000038284	RALYL	94	51.111	Mandrillus_leucophaeus
ENSFHEG00000003605	-	95	70.648	ENSMAMG00000008033	-	94	75.725	Mastacembelus_armatus
ENSFHEG00000003605	-	93	84.561	ENSMAMG00000012236	-	92	86.316	Mastacembelus_armatus
ENSFHEG00000003605	-	93	87.324	ENSMZEG00005020460	-	92	87.324	Maylandia_zebra
ENSFHEG00000003605	-	88	74.170	ENSMZEG00005024249	-	87	76.241	Maylandia_zebra
ENSFHEG00000003605	-	73	50.628	ENSMAUG00000015149	Ralyl	77	54.077	Mesocricetus_auratus
ENSFHEG00000003605	-	73	54.185	ENSMICG00000005558	RALYL	78	76.623	Microcebus_murinus
ENSFHEG00000003605	-	73	50.628	ENSMOCG00000017371	Ralyl	77	54.077	Microtus_ochrogaster
ENSFHEG00000003605	-	82	77.200	ENSMMOG00000019520	-	88	77.444	Mola_mola
ENSFHEG00000003605	-	84	84.706	ENSMMOG00000021465	-	93	84.211	Mola_mola
ENSFHEG00000003605	-	84	74.118	ENSMALG00000007520	-	90	76.580	Monopterus_albus
ENSFHEG00000003605	-	86	78.788	ENSMALG00000014623	-	86	76.895	Monopterus_albus
ENSFHEG00000003605	-	73	50.209	ENSMUSG00000039717	Ralyl	91	75.325	Mus_musculus
ENSFHEG00000003605	-	73	51.883	ENSMPUG00000010724	RALYL	77	53.648	Mustela_putorius_furo
ENSFHEG00000003605	-	73	50.628	ENSNGAG00000013375	Ralyl	77	54.506	Nannospalax_galili
ENSFHEG00000003605	-	90	87.179	ENSNBRG00000004912	-	89	86.989	Neolamprologus_brichardi
ENSFHEG00000003605	-	88	74.539	ENSNBRG00000015676	-	93	71.269	Neolamprologus_brichardi
ENSFHEG00000003605	-	87	50.185	ENSNLEG00000002702	RALYL	89	51.111	Nomascus_leucogenys
ENSFHEG00000003605	-	59	48.969	ENSOPRG00000013650	-	98	47.938	Ochotona_princeps
ENSFHEG00000003605	-	73	51.681	ENSODEG00000001012	RALYL	78	53.390	Octodon_degus
ENSFHEG00000003605	-	88	74.539	ENSONIG00000018350	-	87	76.596	Oreochromis_niloticus
ENSFHEG00000003605	-	93	82.578	ENSONIG00000007859	-	99	84.321	Oreochromis_niloticus
ENSFHEG00000003605	-	93	76.491	ENSORLG00000009999	-	93	77.193	Oryzias_latipes
ENSFHEG00000003605	-	83	75.191	ENSORLG00000003144	-	85	75.958	Oryzias_latipes
ENSFHEG00000003605	-	93	76.491	ENSORLG00020018228	hnrnpc	93	77.193	Oryzias_latipes_hni
ENSFHEG00000003605	-	83	75.191	ENSORLG00015009460	-	85	75.958	Oryzias_latipes_hsok
ENSFHEG00000003605	-	93	76.491	ENSORLG00015019755	-	93	77.193	Oryzias_latipes_hsok
ENSFHEG00000003605	-	83	77.647	ENSOMEG00000022665	-	86	78.214	Oryzias_melastigma
ENSFHEG00000003605	-	88	76.493	ENSOMEG00000020488	-	93	77.622	Oryzias_melastigma
ENSFHEG00000003605	-	87	50.185	ENSPPAG00000038705	RALYL	94	51.111	Pan_paniscus
ENSFHEG00000003605	-	73	55.459	ENSPPRG00000018612	RALYL	76	57.399	Panthera_pardus
ENSFHEG00000003605	-	73	55.459	ENSPTIG00000020331	RALYL	76	57.399	Panthera_tigris_altaica
ENSFHEG00000003605	-	87	50.185	ENSPTRG00000020381	RALYL	94	51.111	Pan_troglodytes
ENSFHEG00000003605	-	87	50.185	ENSPANG00000029305	RALYL	94	51.111	Papio_anubis
ENSFHEG00000003605	-	92	74.913	ENSPKIG00000008592	-	87	77.061	Paramormyrops_kingsleyae
ENSFHEG00000003605	-	91	72.982	ENSPKIG00000022837	-	86	78.339	Paramormyrops_kingsleyae
ENSFHEG00000003605	-	73	50.209	ENSPSIG00000011135	RALYL	76	51.304	Pelodiscus_sinensis
ENSFHEG00000003605	-	67	76.699	ENSPMGG00000017774	-	92	65.672	Periophthalmus_magnuspinnatus
ENSFHEG00000003605	-	72	83.636	ENSPMGG00000013144	-	81	83.333	Periophthalmus_magnuspinnatus
ENSFHEG00000003605	-	73	50.628	ENSPEMG00000016447	Ralyl	77	54.077	Peromyscus_maniculatus_bairdii
ENSFHEG00000003605	-	69	52.632	ENSPMAG00000002407	RALYL	96	51.339	Petromyzon_marinus
ENSFHEG00000003605	-	95	67.208	ENSPFOG00000002643	-	88	75.087	Poecilia_formosa
ENSFHEG00000003605	-	93	90.526	ENSPFOG00000001583	-	93	90.526	Poecilia_formosa
ENSFHEG00000003605	-	83	75.591	ENSPLAG00000000061	-	88	75.087	Poecilia_latipinna
ENSFHEG00000003605	-	93	89.789	ENSPLAG00000015305	-	93	89.789	Poecilia_latipinna
ENSFHEG00000003605	-	83	75.197	ENSPMEG00000016524	-	88	74.394	Poecilia_mexicana
ENSFHEG00000003605	-	93	90.493	ENSPMEG00000004802	-	93	90.493	Poecilia_mexicana
ENSFHEG00000003605	-	100	89.542	ENSPREG00000007928	-	100	89.869	Poecilia_reticulata
ENSFHEG00000003605	-	83	74.803	ENSPREG00000001852	-	92	74.460	Poecilia_reticulata
ENSFHEG00000003605	-	73	50.840	ENSPVAG00000010821	RALYL	78	53.390	Pteropus_vampyrus
ENSFHEG00000003605	-	91	85.199	ENSPNYG00000020293	-	92	85.874	Pundamilia_nyererei
ENSFHEG00000003605	-	88	74.539	ENSPNYG00000003747	-	91	76.727	Pundamilia_nyererei
ENSFHEG00000003605	-	86	71.642	ENSPNAG00000019200	zgc:55733	87	71.326	Pygocentrus_nattereri
ENSFHEG00000003605	-	81	77.016	ENSPNAG00000015686	hnrnpc	88	76.136	Pygocentrus_nattereri
ENSFHEG00000003605	-	87	50.185	ENSRROG00000023925	RALYL	80	74.684	Rhinopithecus_roxellana
ENSFHEG00000003605	-	83	75.954	ENSSFOG00015012924	-	78	96.104	Scleropages_formosus
ENSFHEG00000003605	-	84	71.374	ENSSFOG00015012015	-	95	71.591	Scleropages_formosus
ENSFHEG00000003605	-	95	66.781	ENSSMAG00000011147	-	96	70.896	Scophthalmus_maximus
ENSFHEG00000003605	-	93	80.420	ENSSMAG00000013592	-	91	81.338	Scophthalmus_maximus
ENSFHEG00000003605	-	93	85.915	ENSSDUG00000001723	-	92	86.620	Seriola_dumerili
ENSFHEG00000003605	-	86	76.604	ENSSDUG00000006730	-	87	77.698	Seriola_dumerili
ENSFHEG00000003605	-	92	86.022	ENSSLDG00000007454	-	92	86.525	Seriola_lalandi_dorsalis
ENSFHEG00000003605	-	86	76.604	ENSSLDG00000007474	-	92	77.860	Seriola_lalandi_dorsalis
ENSFHEG00000003605	-	86	76.226	ENSSPAG00000013996	-	87	76.868	Stegastes_partitus
ENSFHEG00000003605	-	92	86.121	ENSSPAG00000023204	-	92	86.972	Stegastes_partitus
ENSFHEG00000003605	-	71	51.282	ENSTGUG00000011689	RALYL	78	52.174	Taeniopygia_guttata
ENSFHEG00000003605	-	86	77.481	ENSTRUG00000020158	-	89	80.000	Takifugu_rubripes
ENSFHEG00000003605	-	84	75.096	ENSTNIG00000007427	-	88	75.735	Tetraodon_nigroviridis
ENSFHEG00000003605	-	83	72.266	ENSTNIG00000000334	-	98	72.285	Tetraodon_nigroviridis
ENSFHEG00000003605	-	71	46.753	ENSTBEG00000005551	RALYL	88	48.291	Tupaia_belangeri
ENSFHEG00000003605	-	73	48.347	ENSTTRG00000015762	RALYL	78	53.219	Tursiops_truncatus
ENSFHEG00000003605	-	73	46.639	ENSVPAG00000008501	RALYL	78	50.211	Vicugna_pacos
ENSFHEG00000003605	-	51	82.927	ENSXCOG00000019434	-	93	69.820	Xiphophorus_couchianus
ENSFHEG00000003605	-	89	82.222	ENSXCOG00000006552	-	86	83.333	Xiphophorus_couchianus
ENSFHEG00000003605	-	93	89.789	ENSXMAG00000009333	-	93	89.789	Xiphophorus_maculatus
ENSFHEG00000003605	-	83	74.803	ENSXMAG00000022849	-	89	74.820	Xiphophorus_maculatus