EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSFHEG00000003626 (Gene tree)
Gene ID: 105934535
Gene Symbol: tsr1
Alias: fc52b09|wu:fc52b09|zgc:123319
Full Name: TSR1%2C ribosome maturation factor
Gene Type: protein_coding
Species: Fundulus_heteroclitus
Status: putative
Strand: Plus strand
Length: 18428 bases
Position: chrKN811433.1:213810-232237
Accession: 105934535
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSFHEP00000002800	AARP2CN	PF08142.12	2.4e-20	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSFHET00000011631	-	2970	XM_012874575	ENSFHEP00000002800	836 (aa)	XP_012730029	UPI00064495FB

Gene Model

Click here to download ENSFHEG00000003626's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSFHEG00000003626's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSFHEG00000003626	tsr1	99	54.502	ENSG00000167721	TSR1	99	54.435	Homo_sapiens
ENSFHEG00000003626	tsr1	99	85.629	ENSAPOG00000020891	tsr1	100	85.629	Acanthochromis_polyacanthus
ENSFHEG00000003626	tsr1	99	54.207	ENSAMEG00000007599	TSR1	99	53.717	Ailuropoda_melanoleuca
ENSFHEG00000003626	tsr1	99	81.078	ENSACIG00000007090	tsr1	100	80.719	Amphilophus_citrinellus
ENSFHEG00000003626	tsr1	99	85.269	ENSAOCG00000023284	tsr1	100	85.030	Amphiprion_ocellaris
ENSFHEG00000003626	tsr1	93	84.961	ENSAPEG00000008452	tsr1	100	84.704	Amphiprion_percula
ENSFHEG00000003626	tsr1	99	82.779	ENSATEG00000021961	tsr1	100	82.067	Anabas_testudineus
ENSFHEG00000003626	tsr1	91	57.050	ENSAPLG00000013422	TSR1	100	57.106	Anas_platyrhynchos
ENSFHEG00000003626	tsr1	71	49.169	ENSACAG00000000859	TSR1	92	47.848	Anolis_carolinensis
ENSFHEG00000003626	tsr1	99	54.982	ENSANAG00000031071	TSR1	99	54.909	Aotus_nancymaae
ENSFHEG00000003626	tsr1	100	83.313	ENSACLG00000007595	tsr1	100	83.194	Astatotilapia_calliptera
ENSFHEG00000003626	tsr1	50	72.143	ENSAMXG00000008470	tsr1	89	72.143	Astyanax_mexicanus
ENSFHEG00000003626	tsr1	98	55.235	ENSBTAG00000004225	TSR1	99	55.036	Bos_taurus
ENSFHEG00000003626	tsr1	97	54.390	ENSCJAG00000012456	TSR1	98	53.959	Callithrix_jacchus
ENSFHEG00000003626	tsr1	99	54.447	ENSCAFG00000002106	-	99	54.262	Canis_familiaris
ENSFHEG00000003626	tsr1	89	52.255	ENSCAFG00000019273	-	100	55.848	Canis_familiaris
ENSFHEG00000003626	tsr1	99	54.447	ENSCAFG00020009728	TSR1	99	54.262	Canis_lupus_dingo
ENSFHEG00000003626	tsr1	99	55.769	ENSCHIG00000023935	TSR1	99	55.449	Capra_hircus
ENSFHEG00000003626	tsr1	99	55.288	ENSTSYG00000005468	TSR1	99	54.970	Carlito_syrichta
ENSFHEG00000003626	tsr1	92	54.463	ENSCPOG00000014833	TSR1	99	53.895	Cavia_porcellus
ENSFHEG00000003626	tsr1	92	53.876	ENSCCAG00000028962	TSR1	98	53.419	Cebus_capucinus
ENSFHEG00000003626	tsr1	97	54.733	ENSCATG00000044262	TSR1	99	54.248	Cercocebus_atys
ENSFHEG00000003626	tsr1	99	54.688	ENSCLAG00000005567	TSR1	99	54.491	Chinchilla_lanigera
ENSFHEG00000003626	tsr1	97	54.854	ENSCSAG00000013788	TSR1	99	54.369	Chlorocebus_sabaeus
ENSFHEG00000003626	tsr1	98	55.569	ENSCPBG00000020363	TSR1	98	54.631	Chrysemys_picta_bellii
ENSFHEG00000003626	tsr1	96	44.351	ENSCING00000020658	-	99	43.682	Ciona_intestinalis
ENSFHEG00000003626	tsr1	95	44.322	ENSCSAVG00000001875	-	100	43.990	Ciona_savignyi
ENSFHEG00000003626	tsr1	87	70.034	ENSCANG00000033056	TSR1	95	69.360	Colobus_angolensis_palliatus
ENSFHEG00000003626	tsr1	99	54.207	ENSCGRG00001023942	Tsr1	99	54.491	Cricetulus_griseus_chok1gshd
ENSFHEG00000003626	tsr1	99	77.751	ENSCSEG00000013009	tsr1	100	78.017	Cynoglossus_semilaevis
ENSFHEG00000003626	tsr1	99	89.556	ENSCVAG00000000506	tsr1	100	89.076	Cyprinodon_variegatus
ENSFHEG00000003626	tsr1	99	72.749	ENSDARG00000007744	tsr1	100	73.150	Danio_rerio
ENSFHEG00000003626	tsr1	99	55.889	ENSDNOG00000004715	TSR1	99	56.681	Dasypus_novemcinctus
ENSFHEG00000003626	tsr1	95	48.564	ENSDORG00000023234	-	99	46.898	Dipodomys_ordii
ENSFHEG00000003626	tsr1	99	54.087	ENSDORG00000016371	-	99	53.541	Dipodomys_ordii
ENSFHEG00000003626	tsr1	96	44.390	FBgn0037073	Tsr1	96	44.266	Drosophila_melanogaster
ENSFHEG00000003626	tsr1	88	68.525	ENSETEG00000017534	TSR1	88	67.869	Echinops_telfairi
ENSFHEG00000003626	tsr1	94	51.201	ENSEBUG00000013731	TSR1	97	50.189	Eptatretus_burgeri
ENSFHEG00000003626	tsr1	99	55.304	ENSEASG00005009302	TSR1	98	55.185	Equus_asinus_asinus
ENSFHEG00000003626	tsr1	99	55.409	ENSECAG00000009114	TSR1	99	55.168	Equus_caballus
ENSFHEG00000003626	tsr1	100	72.986	ENSELUG00000020984	tsr1	96	73.278	Esox_lucius
ENSFHEG00000003626	tsr1	99	54.699	ENSFCAG00000006313	TSR1	99	54.142	Felis_catus
ENSFHEG00000003626	tsr1	99	57.194	ENSFALG00000006532	TSR1	99	57.313	Ficedula_albicollis
ENSFHEG00000003626	tsr1	99	54.392	ENSFDAG00000006038	TSR1	99	54.077	Fukomys_damarensis
ENSFHEG00000003626	tsr1	99	71.514	ENSGMOG00000010336	tsr1	100	71.514	Gadus_morhua
ENSFHEG00000003626	tsr1	100	88.558	ENSGAFG00000012993	tsr1	100	87.962	Gambusia_affinis
ENSFHEG00000003626	tsr1	99	79.478	ENSGACG00000010843	tsr1	100	79.597	Gasterosteus_aculeatus
ENSFHEG00000003626	tsr1	98	55.206	ENSGAGG00000025619	-	99	54.773	Gopherus_agassizii
ENSFHEG00000003626	tsr1	99	54.382	ENSGGOG00000001704	TSR1	99	54.678	Gorilla_gorilla
ENSFHEG00000003626	tsr1	100	83.909	ENSHBUG00000017904	tsr1	100	83.552	Haplochromis_burtoni
ENSFHEG00000003626	tsr1	96	48.447	ENSHGLG00000015688	-	98	47.660	Heterocephalus_glaber_female
ENSFHEG00000003626	tsr1	99	55.808	ENSHGLG00000012806	-	99	54.589	Heterocephalus_glaber_female
ENSFHEG00000003626	tsr1	99	55.808	ENSHGLG00100015392	TSR1	99	54.589	Heterocephalus_glaber_male
ENSFHEG00000003626	tsr1	99	76.647	ENSHCOG00000001432	tsr1	100	76.287	Hippocampus_comes
ENSFHEG00000003626	tsr1	99	72.381	ENSIPUG00000004618	tsr1	100	73.095	Ictalurus_punctatus
ENSFHEG00000003626	tsr1	99	55.529	ENSSTOG00000011819	TSR1	99	55.329	Ictidomys_tridecemlineatus
ENSFHEG00000003626	tsr1	90	53.585	ENSJJAG00000019505	Tsr1	95	52.880	Jaculus_jaculus
ENSFHEG00000003626	tsr1	100	82.100	ENSKMAG00000005763	tsr1	100	81.981	Kryptolebias_marmoratus
ENSFHEG00000003626	tsr1	100	83.810	ENSLBEG00000021823	tsr1	100	84.048	Labrus_bergylta
ENSFHEG00000003626	tsr1	99	56.856	ENSLACG00000002197	TSR1	100	56.126	Latimeria_chalumnae
ENSFHEG00000003626	tsr1	92	75.000	ENSLOCG00000006491	TSR1	99	75.000	Lepisosteus_oculatus
ENSFHEG00000003626	tsr1	97	54.976	ENSMFAG00000021330	TSR1	99	54.490	Macaca_fascicularis
ENSFHEG00000003626	tsr1	97	54.733	ENSMMUG00000017519	TSR1	99	54.369	Macaca_mulatta
ENSFHEG00000003626	tsr1	97	54.854	ENSMNEG00000031382	TSR1	99	54.369	Macaca_nemestrina
ENSFHEG00000003626	tsr1	97	54.612	ENSMLEG00000036733	TSR1	99	54.126	Mandrillus_leucophaeus
ENSFHEG00000003626	tsr1	100	82.840	ENSMAMG00000017918	tsr1	100	82.722	Mastacembelus_armatus
ENSFHEG00000003626	tsr1	99	82.936	ENSMZEG00005007477	tsr1	100	82.816	Maylandia_zebra
ENSFHEG00000003626	tsr1	99	56.429	ENSMGAG00000005576	TSR1	100	56.176	Meleagris_gallopavo
ENSFHEG00000003626	tsr1	99	55.904	ENSMICG00000012943	TSR1	99	55.422	Microcebus_murinus
ENSFHEG00000003626	tsr1	99	54.262	ENSMOCG00000022764	Tsr1	99	54.067	Microtus_ochrogaster
ENSFHEG00000003626	tsr1	99	82.057	ENSMMOG00000014280	tsr1	100	82.057	Mola_mola
ENSFHEG00000003626	tsr1	97	55.529	ENSMODG00000010658	TSR1	99	54.699	Monodelphis_domestica
ENSFHEG00000003626	tsr1	99	83.373	ENSMALG00000011681	tsr1	100	83.632	Monopterus_albus
ENSFHEG00000003626	tsr1	99	54.970	MGP_CAROLIEiJ_G0016727	Tsr1	99	53.772	Mus_caroli
ENSFHEG00000003626	tsr1	99	55.210	ENSMUSG00000038335	Tsr1	99	53.892	Mus_musculus
ENSFHEG00000003626	tsr1	99	55.449	MGP_PahariEiJ_G0017864	Tsr1	99	54.371	Mus_pahari
ENSFHEG00000003626	tsr1	99	55.210	MGP_SPRETEiJ_G0017570	Tsr1	99	53.892	Mus_spretus
ENSFHEG00000003626	tsr1	81	56.955	ENSMPUG00000013000	TSR1	100	56.433	Mustela_putorius_furo
ENSFHEG00000003626	tsr1	98	56.092	ENSMLUG00000003505	TSR1	99	55.649	Myotis_lucifugus
ENSFHEG00000003626	tsr1	100	83.552	ENSNBRG00000020728	tsr1	100	83.313	Neolamprologus_brichardi
ENSFHEG00000003626	tsr1	99	47.356	ENSNLEG00000017184	TSR1	95	67.353	Nomascus_leucogenys
ENSFHEG00000003626	tsr1	99	82.837	ENSONIG00000013131	tsr1	100	81.861	Oreochromis_niloticus
ENSFHEG00000003626	tsr1	98	55.422	ENSOCUG00000014256	TSR1	99	55.181	Oryctolagus_cuniculus
ENSFHEG00000003626	tsr1	100	82.578	ENSORLG00000004926	tsr1	100	82.220	Oryzias_latipes
ENSFHEG00000003626	tsr1	100	81.862	ENSORLG00020008792	tsr1	100	81.742	Oryzias_latipes_hni
ENSFHEG00000003626	tsr1	100	82.816	ENSORLG00015013838	tsr1	100	82.458	Oryzias_latipes_hsok
ENSFHEG00000003626	tsr1	100	82.100	ENSOMEG00000004830	tsr1	100	81.146	Oryzias_melastigma
ENSFHEG00000003626	tsr1	99	54.827	ENSOGAG00000004492	TSR1	99	54.157	Otolemur_garnettii
ENSFHEG00000003626	tsr1	99	55.769	ENSOARG00000015437	TSR1	97	55.449	Ovis_aries
ENSFHEG00000003626	tsr1	99	54.502	ENSPPAG00000036355	TSR1	99	54.435	Pan_paniscus
ENSFHEG00000003626	tsr1	99	54.458	ENSPPRG00000015519	-	99	54.022	Panthera_pardus
ENSFHEG00000003626	tsr1	99	54.458	ENSPTIG00000010608	TSR1	99	54.022	Panthera_tigris_altaica
ENSFHEG00000003626	tsr1	99	54.502	ENSPTRG00000008547	TSR1	99	54.435	Pan_troglodytes
ENSFHEG00000003626	tsr1	97	52.126	ENSPANG00000024463	TSR1	99	52.369	Papio_anubis
ENSFHEG00000003626	tsr1	99	69.773	ENSPKIG00000013972	tsr1	100	69.286	Paramormyrops_kingsleyae
ENSFHEG00000003626	tsr1	87	55.890	ENSPSIG00000018258	TSR1	99	55.144	Pelodiscus_sinensis
ENSFHEG00000003626	tsr1	99	79.281	ENSPMGG00000011577	tsr1	99	79.112	Periophthalmus_magnuspinnatus
ENSFHEG00000003626	tsr1	99	53.670	ENSPEMG00000018033	Tsr1	99	53.237	Peromyscus_maniculatus_bairdii
ENSFHEG00000003626	tsr1	98	55.462	ENSPCIG00000009357	TSR1	97	55.160	Phascolarctos_cinereus
ENSFHEG00000003626	tsr1	99	87.232	ENSPFOG00000004483	TSR1	100	87.709	Poecilia_formosa
ENSFHEG00000003626	tsr1	100	88.466	ENSPLAG00000022320	tsr1	100	89.061	Poecilia_latipinna
ENSFHEG00000003626	tsr1	100	88.466	ENSPMEG00000004577	tsr1	100	89.180	Poecilia_mexicana
ENSFHEG00000003626	tsr1	97	89.474	ENSPREG00000010354	tsr1	96	89.609	Poecilia_reticulata
ENSFHEG00000003626	tsr1	99	50.299	ENSPPYG00000007792	TSR1	99	50.544	Pongo_abelii
ENSFHEG00000003626	tsr1	51	60.465	ENSPCAG00000012973	-	69	66.667	Procavia_capensis
ENSFHEG00000003626	tsr1	99	55.301	ENSPCOG00000017928	TSR1	99	54.940	Propithecus_coquereli
ENSFHEG00000003626	tsr1	99	54.928	ENSPVAG00000002162	TSR1	99	54.731	Pteropus_vampyrus
ENSFHEG00000003626	tsr1	100	83.552	ENSPNYG00000016163	tsr1	100	83.433	Pundamilia_nyererei
ENSFHEG00000003626	tsr1	99	73.690	ENSPNAG00000008659	tsr1	100	73.690	Pygocentrus_nattereri
ENSFHEG00000003626	tsr1	99	53.606	ENSRNOG00000002980	Tsr1	99	53.245	Rattus_norvegicus
ENSFHEG00000003626	tsr1	99	54.622	ENSRBIG00000040016	TSR1	99	54.371	Rhinopithecus_bieti
ENSFHEG00000003626	tsr1	99	54.502	ENSRROG00000030361	TSR1	99	54.251	Rhinopithecus_roxellana
ENSFHEG00000003626	tsr1	99	54.447	ENSSBOG00000020785	TSR1	99	54.435	Saimiri_boliviensis_boliviensis
ENSFHEG00000003626	tsr1	98	55.981	ENSSHAG00000011394	TSR1	99	55.861	Sarcophilus_harrisii
ENSFHEG00000003626	tsr1	99	71.377	ENSSFOG00015005455	tsr1	100	71.789	Scleropages_formosus
ENSFHEG00000003626	tsr1	99	82.275	ENSSMAG00000009504	tsr1	100	82.635	Scophthalmus_maximus
ENSFHEG00000003626	tsr1	100	85.185	ENSSDUG00000012074	tsr1	100	85.185	Seriola_dumerili
ENSFHEG00000003626	tsr1	100	85.561	ENSSLDG00000002031	tsr1	100	85.442	Seriola_lalandi_dorsalis
ENSFHEG00000003626	tsr1	92	55.600	ENSSARG00000000759	TSR1	93	55.600	Sorex_araneus
ENSFHEG00000003626	tsr1	99	56.754	ENSSPUG00000007042	TSR1	99	55.981	Sphenodon_punctatus
ENSFHEG00000003626	tsr1	99	83.909	ENSSPAG00000021951	tsr1	100	85.101	Stegastes_partitus
ENSFHEG00000003626	tsr1	99	55.529	ENSSSCG00000038534	TSR1	99	55.396	Sus_scrofa
ENSFHEG00000003626	tsr1	89	59.284	ENSTGUG00000005883	TSR1	100	58.235	Taeniopygia_guttata
ENSFHEG00000003626	tsr1	99	80.359	ENSTRUG00000004665	tsr1	100	80.599	Takifugu_rubripes
ENSFHEG00000003626	tsr1	99	80.769	ENSTNIG00000016196	tsr1	100	80.529	Tetraodon_nigroviridis
ENSFHEG00000003626	tsr1	66	70.769	ENSTBEG00000015275	-	66	70.769	Tupaia_belangeri
ENSFHEG00000003626	tsr1	99	55.355	ENSTTRG00000001177	TSR1	99	55.516	Tursiops_truncatus
ENSFHEG00000003626	tsr1	99	54.132	ENSUAMG00000025160	TSR1	99	54.142	Ursus_americanus
ENSFHEG00000003626	tsr1	95	53.903	ENSUMAG00000009294	TSR1	98	53.440	Ursus_maritimus
ENSFHEG00000003626	tsr1	99	54.447	ENSVVUG00000021767	TSR1	99	54.262	Vulpes_vulpes
ENSFHEG00000003626	tsr1	99	52.076	ENSXETG00000023797	tsr1	100	50.708	Xenopus_tropicalis
ENSFHEG00000003626	tsr1	99	87.799	ENSXCOG00000009635	tsr1	100	86.826	Xiphophorus_couchianus
ENSFHEG00000003626	tsr1	100	89.141	ENSXMAG00000001397	tsr1	97	88.663	Xiphophorus_maculatus