EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSFHEG00000003641 (Gene tree)
Gene ID: 105937250
Gene Symbol: -
Alias: -
Full Name: RNA exonuclease 1 homolog
Gene Type: protein_coding
Species: Fundulus_heteroclitus
Status: putative
Strand: Plus strand
Length: 11474 bases
Position: chrKN811504.1:546306-557779
Accession: 105937250
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSFHEP00000022933	RNase_T	PF00929.24	7.7e-06	1	1
ENSFHEP00000002798	RNase_T	PF00929.24	1.2e-05	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSFHET00000011605	-	4725	XM_012878454	ENSFHEP00000022933	1136 (aa)	XP_012733908	UPI000644CCBD
ENSFHET00000011629	-	2688	-	ENSFHEP00000002798	895 (aa)	-	-

Gene Model

Click here to download ENSFHEG00000003641's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSFHEG00000003641's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSFHEG00000003641	-	94	53.521	ENSAPOG00000005095	zgc:152968	94	72.439	Acanthochromis_polyacanthus
ENSFHEG00000003641	-	80	76.570	ENSACIG00000002527	zgc:152968	96	76.570	Amphilophus_citrinellus
ENSFHEG00000003641	-	98	66.981	ENSAOCG00000018049	-	98	69.024	Amphiprion_ocellaris
ENSFHEG00000003641	-	95	70.000	ENSAPEG00000012559	zgc:152968	84	70.000	Amphiprion_percula
ENSFHEG00000003641	-	97	71.117	ENSACLG00000020524	-	70	77.995	Astatotilapia_calliptera
ENSFHEG00000003641	-	81	84.521	ENSCVAG00000015400	zgc:152968	100	84.521	Cyprinodon_variegatus
ENSFHEG00000003641	-	83	58.128	ENSDARG00000037002	zgc:152968	53	76.923	Danio_rerio
ENSFHEG00000003641	-	77	60.482	ENSELUG00000014272	zgc:152968	63	60.482	Esox_lucius
ENSFHEG00000003641	-	89	92.202	ENSGAFG00000016810	-	93	76.571	Gambusia_affinis
ENSFHEG00000003641	-	94	69.531	ENSHBUG00000007524	-	56	69.531	Haplochromis_burtoni
ENSFHEG00000003641	-	99	42.915	ENSIPUG00000004633	zgc:152968	72	80.769	Ictalurus_punctatus
ENSFHEG00000003641	-	96	67.647	ENSLBEG00000026485	zgc:152968	98	66.856	Labrus_bergylta
ENSFHEG00000003641	-	84	62.946	ENSMAMG00000005920	-	100	47.747	Mastacembelus_armatus
ENSFHEG00000003641	-	97	70.874	ENSMZEG00005013783	-	70	76.773	Maylandia_zebra
ENSFHEG00000003641	-	85	76.399	ENSMMOG00000018072	zgc:152968	99	76.399	Mola_mola
ENSFHEG00000003641	-	85	64.773	ENSMALG00000003536	-	97	64.773	Monopterus_albus
ENSFHEG00000003641	-	100	69.193	ENSONIG00000016897	-	100	53.640	Oreochromis_niloticus
ENSFHEG00000003641	-	96	67.980	ENSORLG00020012504	-	82	65.879	Oryzias_latipes_hni
ENSFHEG00000003641	-	74	72.922	ENSOMEG00000008840	-	83	72.922	Oryzias_melastigma
ENSFHEG00000003641	-	100	75.000	ENSPFOG00000006104	-	100	67.577	Poecilia_formosa
ENSFHEG00000003641	-	100	74.600	ENSPLAG00000005034	-	97	85.000	Poecilia_latipinna
ENSFHEG00000003641	-	100	74.771	ENSPMEG00000018012	-	100	66.980	Poecilia_mexicana
ENSFHEG00000003641	-	99	76.190	ENSPREG00000007481	-	98	78.431	Poecilia_reticulata
ENSFHEG00000003641	-	59	47.626	ENSSFOG00015023869	zgc:152968	50	84.615	Scleropages_formosus
ENSFHEG00000003641	-	100	69.586	ENSSMAG00000008149	-	67	69.417	Scophthalmus_maximus
ENSFHEG00000003641	-	88	68.991	ENSSDUG00000022323	-	97	79.075	Seriola_dumerili
ENSFHEG00000003641	-	93	72.616	ENSSLDG00000018799	zgc:152968	94	78.589	Seriola_lalandi_dorsalis
ENSFHEG00000003641	-	94	68.627	ENSSPAG00000007632	-	85	68.627	Stegastes_partitus
ENSFHEG00000003641	-	69	67.150	ENSTRUG00000025441	zgc:152968	60	66.903	Takifugu_rubripes
ENSFHEG00000003641	-	96	76.214	ENSXMAG00000026483	-	100	66.440	Xiphophorus_maculatus