EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSFHEG00000003680 (Gene tree)
Gene ID: 105928648
Gene Symbol: lsg1
Alias: fb99b06|wu:fb99b06|zgc:76988
Full Name: large 60S subunit nuclear export GTPase 1
Gene Type: protein_coding
Species: Fundulus_heteroclitus
Status: putative
Strand: Plus strand
Length: 6995 bases
Position: chrKN811326.1:1710674-1717668
Accession: 105928648
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSFHEP00000002839	MMR_HSR1	PF01926.23	5.5e-14	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSFHET00000011563	-	1902	XM_012866012	ENSFHEP00000002839	633 (aa)	XP_012721466	-

Gene Model

Click here to download ENSFHEG00000003680's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSFHEG00000003680's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSFHEG00000003680	lsg1	65	31.279	ENSFHEG00000011353	gnl1	65	31.050

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSFHEG00000003680	lsg1	99	64.776	ENSG00000041802	LSG1	89	76.730	Homo_sapiens
ENSFHEG00000003680	lsg1	100	77.950	ENSAPOG00000009694	lsg1	98	80.000	Acanthochromis_polyacanthus
ENSFHEG00000003680	lsg1	99	61.699	ENSAMEG00000009343	LSG1	97	62.080	Ailuropoda_melanoleuca
ENSFHEG00000003680	lsg1	98	81.470	ENSACIG00000012406	lsg1	97	81.380	Amphilophus_citrinellus
ENSFHEG00000003680	lsg1	100	78.483	ENSAOCG00000016066	lsg1	98	80.160	Amphiprion_ocellaris
ENSFHEG00000003680	lsg1	100	78.947	ENSAPEG00000003252	lsg1	98	80.000	Amphiprion_percula
ENSFHEG00000003680	lsg1	98	82.080	ENSATEG00000011794	lsg1	97	81.833	Anabas_testudineus
ENSFHEG00000003680	lsg1	94	60.794	ENSACAG00000004222	LSG1	99	61.587	Anolis_carolinensis
ENSFHEG00000003680	lsg1	99	63.785	ENSANAG00000021153	LSG1	97	63.369	Aotus_nancymaae
ENSFHEG00000003680	lsg1	100	81.431	ENSACLG00000000520	lsg1	98	81.250	Astatotilapia_calliptera
ENSFHEG00000003680	lsg1	99	72.068	ENSAMXG00000008271	lsg1	98	72.943	Astyanax_mexicanus
ENSFHEG00000003680	lsg1	99	62.722	ENSBTAG00000008461	LSG1	97	64.431	Bos_taurus
ENSFHEG00000003680	lsg1	67	51.795	WBGene00016907	C53H9.2	79	52.518	Caenorhabditis_elegans
ENSFHEG00000003680	lsg1	99	63.636	ENSCJAG00000013962	LSG1	97	64.441	Callithrix_jacchus
ENSFHEG00000003680	lsg1	94	64.753	ENSCAFG00000013445	LSG1	99	64.593	Canis_familiaris
ENSFHEG00000003680	lsg1	99	63.444	ENSCAFG00020002216	LSG1	99	64.045	Canis_lupus_dingo
ENSFHEG00000003680	lsg1	99	63.528	ENSCHIG00000015769	LSG1	97	65.039	Capra_hircus
ENSFHEG00000003680	lsg1	99	62.632	ENSTSYG00000001447	LSG1	97	63.231	Carlito_syrichta
ENSFHEG00000003680	lsg1	94	64.250	ENSCAPG00000009856	LSG1	99	63.371	Cavia_aperea
ENSFHEG00000003680	lsg1	99	64.157	ENSCCAG00000035744	LSG1	97	63.608	Cebus_capucinus
ENSFHEG00000003680	lsg1	99	65.075	ENSCATG00000042060	LSG1	97	64.253	Cercocebus_atys
ENSFHEG00000003680	lsg1	99	64.776	ENSCSAG00000008796	LSG1	89	64.451	Chlorocebus_sabaeus
ENSFHEG00000003680	lsg1	100	64.857	ENSCPBG00000015941	LSG1	82	64.706	Chrysemys_picta_bellii
ENSFHEG00000003680	lsg1	79	54.545	ENSCING00000007079	-	96	56.808	Ciona_intestinalis
ENSFHEG00000003680	lsg1	84	48.732	ENSCSAVG00000002514	-	91	57.333	Ciona_savignyi
ENSFHEG00000003680	lsg1	99	64.328	ENSCANG00000030709	LSG1	97	63.636	Colobus_angolensis_palliatus
ENSFHEG00000003680	lsg1	99	65.062	ENSCGRG00001019846	Lsg1	97	65.446	Cricetulus_griseus_chok1gshd
ENSFHEG00000003680	lsg1	99	63.788	ENSCGRG00000014617	Lsg1	97	63.665	Cricetulus_griseus_crigri
ENSFHEG00000003680	lsg1	98	78.254	ENSCSEG00000008522	lsg1	97	78.150	Cynoglossus_semilaevis
ENSFHEG00000003680	lsg1	97	84.887	ENSCVAG00000002484	lsg1	97	85.852	Cyprinodon_variegatus
ENSFHEG00000003680	lsg1	100	74.299	ENSDARG00000015352	lsg1	97	73.760	Danio_rerio
ENSFHEG00000003680	lsg1	99	64.091	ENSDNOG00000006224	LSG1	97	63.174	Dasypus_novemcinctus
ENSFHEG00000003680	lsg1	99	49.457	FBgn0266284	Ns3	97	49.206	Drosophila_melanogaster
ENSFHEG00000003680	lsg1	88	72.727	ENSETEG00000003888	LSG1	86	75.000	Echinops_telfairi
ENSFHEG00000003680	lsg1	88	55.952	ENSEBUG00000003119	lsg1	85	55.952	Eptatretus_burgeri
ENSFHEG00000003680	lsg1	99	64.199	ENSEASG00005000678	LSG1	97	63.721	Equus_asinus_asinus
ENSFHEG00000003680	lsg1	99	64.048	ENSECAG00000017659	LSG1	97	63.919	Equus_caballus
ENSFHEG00000003680	lsg1	87	60.345	ENSEEUG00000015217	LSG1	75	60.345	Erinaceus_europaeus
ENSFHEG00000003680	lsg1	100	71.517	ENSELUG00000023973	lsg1	98	71.429	Esox_lucius
ENSFHEG00000003680	lsg1	99	63.213	ENSFCAG00000024957	LSG1	97	63.467	Felis_catus
ENSFHEG00000003680	lsg1	92	62.927	ENSFALG00000007210	LSG1	94	62.764	Ficedula_albicollis
ENSFHEG00000003680	lsg1	99	62.809	ENSFDAG00000017373	LSG1	97	63.333	Fukomys_damarensis
ENSFHEG00000003680	lsg1	98	68.513	ENSGMOG00000015834	lsg1	97	68.371	Gadus_morhua
ENSFHEG00000003680	lsg1	99	58.569	ENSGALG00000007058	LSG1	86	60.274	Gallus_gallus
ENSFHEG00000003680	lsg1	97	87.540	ENSGAFG00000015831	lsg1	97	87.864	Gambusia_affinis
ENSFHEG00000003680	lsg1	98	77.338	ENSGACG00000009323	lsg1	97	77.229	Gasterosteus_aculeatus
ENSFHEG00000003680	lsg1	99	64.925	ENSGGOG00000000520	LSG1	97	64.253	Gorilla_gorilla
ENSFHEG00000003680	lsg1	100	81.972	ENSHBUG00000005659	lsg1	98	81.804	Haplochromis_burtoni
ENSFHEG00000003680	lsg1	99	62.037	ENSHGLG00000017390	LSG1	97	62.835	Heterocephalus_glaber_female
ENSFHEG00000003680	lsg1	99	62.037	ENSHGLG00100018587	LSG1	97	62.835	Heterocephalus_glaber_male
ENSFHEG00000003680	lsg1	97	77.724	ENSHCOG00000016848	lsg1	97	77.724	Hippocampus_comes
ENSFHEG00000003680	lsg1	100	73.364	ENSIPUG00000008631	lsg1	97	73.206	Ictalurus_punctatus
ENSFHEG00000003680	lsg1	75	60.887	ENSSTOG00000010234	LSG1	92	60.887	Ictidomys_tridecemlineatus
ENSFHEG00000003680	lsg1	99	65.480	ENSJJAG00000015513	Lsg1	97	65.501	Jaculus_jaculus
ENSFHEG00000003680	lsg1	98	79.524	ENSKMAG00000009681	lsg1	97	79.585	Kryptolebias_marmoratus
ENSFHEG00000003680	lsg1	98	77.636	ENSLBEG00000024261	lsg1	97	78.170	Labrus_bergylta
ENSFHEG00000003680	lsg1	100	65.015	ENSLACG00000013399	LSG1	98	65.639	Latimeria_chalumnae
ENSFHEG00000003680	lsg1	98	70.330	ENSLOCG00000004918	lsg1	97	69.782	Lepisosteus_oculatus
ENSFHEG00000003680	lsg1	99	64.536	ENSLAFG00000012919	-	97	65.306	Loxodonta_africana
ENSFHEG00000003680	lsg1	99	64.925	ENSMFAG00000039903	LSG1	97	64.099	Macaca_fascicularis
ENSFHEG00000003680	lsg1	99	64.925	ENSMMUG00000010708	LSG1	97	65.331	Macaca_mulatta
ENSFHEG00000003680	lsg1	99	64.925	ENSMNEG00000031538	LSG1	97	64.099	Macaca_nemestrina
ENSFHEG00000003680	lsg1	99	64.776	ENSMLEG00000041184	LSG1	97	65.331	Mandrillus_leucophaeus
ENSFHEG00000003680	lsg1	100	76.361	ENSMAMG00000000470	lsg1	98	76.677	Mastacembelus_armatus
ENSFHEG00000003680	lsg1	100	81.972	ENSMZEG00005017865	lsg1	98	81.804	Maylandia_zebra
ENSFHEG00000003680	lsg1	88	60.134	ENSMGAG00000007050	LSG1	99	62.098	Meleagris_gallopavo
ENSFHEG00000003680	lsg1	91	62.479	ENSMAUG00000016976	Lsg1	90	65.018	Mesocricetus_auratus
ENSFHEG00000003680	lsg1	99	64.036	ENSMICG00000049087	LSG1	97	64.319	Microcebus_murinus
ENSFHEG00000003680	lsg1	99	63.872	ENSMOCG00000022136	Lsg1	97	64.364	Microtus_ochrogaster
ENSFHEG00000003680	lsg1	86	87.603	ENSMMOG00000008884	lsg1	97	74.920	Mola_mola
ENSFHEG00000003680	lsg1	99	55.093	ENSMODG00000019828	LSG1	97	54.773	Monodelphis_domestica
ENSFHEG00000003680	lsg1	99	64.526	MGP_CAROLIEiJ_G0020648	Lsg1	97	65.156	Mus_caroli
ENSFHEG00000003680	lsg1	99	64.869	ENSMUSG00000022538	Lsg1	97	65.517	Mus_musculus
ENSFHEG00000003680	lsg1	98	64.451	MGP_PahariEiJ_G0016352	Lsg1	97	64.330	Mus_pahari
ENSFHEG00000003680	lsg1	99	64.220	MGP_SPRETEiJ_G0021544	Lsg1	97	64.567	Mus_spretus
ENSFHEG00000003680	lsg1	99	62.351	ENSMPUG00000003734	LSG1	97	63.820	Mustela_putorius_furo
ENSFHEG00000003680	lsg1	99	64.199	ENSMLUG00000012548	LSG1	97	64.219	Myotis_lucifugus
ENSFHEG00000003680	lsg1	99	64.319	ENSNGAG00000021872	Lsg1	97	65.142	Nannospalax_galili
ENSFHEG00000003680	lsg1	99	65.165	ENSNLEG00000008293	LSG1	97	65.217	Nomascus_leucogenys
ENSFHEG00000003680	lsg1	68	72.165	ENSMEUG00000009041	-	84	72.165	Notamacropus_eugenii
ENSFHEG00000003680	lsg1	100	81.972	ENSONIG00000002635	lsg1	98	81.804	Oreochromis_niloticus
ENSFHEG00000003680	lsg1	94	65.665	ENSOANG00000012742	LSG1	99	65.665	Ornithorhynchus_anatinus
ENSFHEG00000003680	lsg1	99	63.855	ENSOCUG00000004817	LSG1	97	64.861	Oryctolagus_cuniculus
ENSFHEG00000003680	lsg1	98	80.775	ENSORLG00000007695	lsg1	97	80.682	Oryzias_latipes
ENSFHEG00000003680	lsg1	98	81.099	ENSORLG00020016286	lsg1	97	81.006	Oryzias_latipes_hni
ENSFHEG00000003680	lsg1	98	79.968	ENSORLG00015012025	lsg1	97	80.195	Oryzias_latipes_hsok
ENSFHEG00000003680	lsg1	98	78.115	ENSOMEG00000022379	lsg1	97	78.331	Oryzias_melastigma
ENSFHEG00000003680	lsg1	99	63.213	ENSOGAG00000003475	LSG1	97	63.876	Otolemur_garnettii
ENSFHEG00000003680	lsg1	99	62.426	ENSOARG00000020403	LSG1	97	64.174	Ovis_aries
ENSFHEG00000003680	lsg1	99	64.264	ENSPPAG00000029271	LSG1	97	64.407	Pan_paniscus
ENSFHEG00000003680	lsg1	99	62.798	ENSPPRG00000010281	LSG1	97	62.443	Panthera_pardus
ENSFHEG00000003680	lsg1	99	63.609	ENSPTIG00000010789	LSG1	97	63.272	Panthera_tigris_altaica
ENSFHEG00000003680	lsg1	99	64.114	ENSPTRG00000015760	LSG1	97	64.253	Pan_troglodytes
ENSFHEG00000003680	lsg1	99	64.776	ENSPANG00000018249	LSG1	97	63.945	Papio_anubis
ENSFHEG00000003680	lsg1	99	73.832	ENSPKIG00000002895	lsg1	97	73.920	Paramormyrops_kingsleyae
ENSFHEG00000003680	lsg1	95	61.033	ENSPSIG00000009821	LSG1	99	60.876	Pelodiscus_sinensis
ENSFHEG00000003680	lsg1	94	78.489	ENSPMGG00000000931	lsg1	100	78.161	Periophthalmus_magnuspinnatus
ENSFHEG00000003680	lsg1	99	62.273	ENSPEMG00000012082	-	97	62.928	Peromyscus_maniculatus_bairdii
ENSFHEG00000003680	lsg1	99	59.325	ENSPMAG00000007451	lsg1	98	59.850	Petromyzon_marinus
ENSFHEG00000003680	lsg1	100	64.021	ENSPCIG00000013890	LSG1	79	64.362	Phascolarctos_cinereus
ENSFHEG00000003680	lsg1	97	87.840	ENSPFOG00000021882	lsg1	97	88.000	Poecilia_formosa
ENSFHEG00000003680	lsg1	97	88.530	ENSPLAG00000019536	lsg1	97	88.853	Poecilia_latipinna
ENSFHEG00000003680	lsg1	97	86.922	ENSPMEG00000017281	lsg1	97	86.922	Poecilia_mexicana
ENSFHEG00000003680	lsg1	97	76.984	ENSPREG00000006048	lsg1	97	77.143	Poecilia_reticulata
ENSFHEG00000003680	lsg1	92	62.602	ENSPPYG00000014425	LSG1	97	62.752	Pongo_abelii
ENSFHEG00000003680	lsg1	89	70.130	ENSPCAG00000005511	LSG1	86	73.333	Procavia_capensis
ENSFHEG00000003680	lsg1	99	64.060	ENSPCOG00000012360	LSG1	97	64.174	Propithecus_coquereli
ENSFHEG00000003680	lsg1	100	81.431	ENSPNYG00000021994	lsg1	98	81.250	Pundamilia_nyererei
ENSFHEG00000003680	lsg1	100	72.093	ENSPNAG00000015533	lsg1	98	71.975	Pygocentrus_nattereri
ENSFHEG00000003680	lsg1	99	63.609	ENSRNOG00000001727	Lsg1	97	64.142	Rattus_norvegicus
ENSFHEG00000003680	lsg1	99	64.425	ENSRBIG00000029053	LSG1	97	64.969	Rhinopithecus_bieti
ENSFHEG00000003680	lsg1	99	64.425	ENSRROG00000037702	LSG1	97	64.969	Rhinopithecus_roxellana
ENSFHEG00000003680	lsg1	82	40.590	YGL099W	LSG1	70	41.650	Saccharomyces_cerevisiae
ENSFHEG00000003680	lsg1	99	63.785	ENSSBOG00000034938	LSG1	97	63.328	Saimiri_boliviensis_boliviensis
ENSFHEG00000003680	lsg1	77	61.996	ENSSHAG00000003487	LSG1	99	60.769	Sarcophilus_harrisii
ENSFHEG00000003680	lsg1	98	72.640	ENSSFOG00015008955	lsg1	97	72.669	Scleropages_formosus
ENSFHEG00000003680	lsg1	98	80.411	ENSSDUG00000004622	lsg1	98	80.317	Seriola_dumerili
ENSFHEG00000003680	lsg1	98	80.671	ENSSLDG00000010869	lsg1	97	80.578	Seriola_lalandi_dorsalis
ENSFHEG00000003680	lsg1	84	66.667	ENSSARG00000012981	LSG1	71	70.435	Sorex_araneus
ENSFHEG00000003680	lsg1	100	64.590	ENSSPUG00000016347	LSG1	97	64.130	Sphenodon_punctatus
ENSFHEG00000003680	lsg1	100	78.774	ENSSPAG00000005508	lsg1	98	79.968	Stegastes_partitus
ENSFHEG00000003680	lsg1	99	63.636	ENSSSCG00000011827	LSG1	97	63.224	Sus_scrofa
ENSFHEG00000003680	lsg1	88	60.667	ENSTGUG00000009068	LSG1	100	60.231	Taeniopygia_guttata
ENSFHEG00000003680	lsg1	97	75.689	ENSTRUG00000017380	lsg1	97	75.689	Takifugu_rubripes
ENSFHEG00000003680	lsg1	97	78.560	ENSTNIG00000015570	lsg1	97	78.560	Tetraodon_nigroviridis
ENSFHEG00000003680	lsg1	99	59.970	ENSTTRG00000000559	LSG1	97	59.531	Tursiops_truncatus
ENSFHEG00000003680	lsg1	99	62.090	ENSUAMG00000012454	LSG1	97	63.256	Ursus_americanus
ENSFHEG00000003680	lsg1	99	62.090	ENSUMAG00000000855	LSG1	97	63.256	Ursus_maritimus
ENSFHEG00000003680	lsg1	94	61.587	ENSVPAG00000012400	LSG1	99	60.635	Vicugna_pacos
ENSFHEG00000003680	lsg1	94	64.725	ENSVVUG00000008956	LSG1	97	64.943	Vulpes_vulpes
ENSFHEG00000003680	lsg1	100	65.649	ENSXETG00000003451	lsg1	98	66.132	Xenopus_tropicalis
ENSFHEG00000003680	lsg1	97	88.006	ENSXCOG00000003239	lsg1	97	88.006	Xiphophorus_couchianus
ENSFHEG00000003680	lsg1	97	85.290	ENSXMAG00000005536	lsg1	98	85.603	Xiphophorus_maculatus