EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSFHEG00000003786 (Gene tree)
Gene ID: 105939208
Gene Symbol: snrnp200
Alias: fb63a09|si:ch211-251j10.5|wu:fb63a09
Full Name: small nuclear ribonucleoprotein U5 subunit 200
Gene Type: protein_coding
Species: Fundulus_heteroclitus
Status: putative
Strand: Minus strand
Length: 16724 bases
Position: chrKN811562.1:610317-627040
Accession: 105939208
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSFHEP00000002898	ResIII	PF04851.15	2.6e-16	1	1
ENSFHEP00000002898	DEAD	PF00270.29	1.4e-36	1	2
ENSFHEP00000002898	DEAD	PF00270.29	1.4e-36	2	2

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSFHET00000011448	-	6255	XM_012881281	ENSFHEP00000002898	2084 (aa)	XP_012736735	-

Gene Model

Click here to download ENSFHEG00000003786's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSFHEG00000003786's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSFHEG00000003786	snrnp200	80	43.746	ENSFHEG00000019247	ascc3	86	44.014

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSFHEG00000003786	snrnp200	99	87.781	ENSG00000144028	SNRNP200	99	89.608	Homo_sapiens
ENSFHEG00000003786	snrnp200	100	94.663	ENSAPOG00000010223	snrnp200	100	94.663	Acanthochromis_polyacanthus
ENSFHEG00000003786	snrnp200	99	87.828	ENSAMEG00000008996	SNRNP200	100	87.828	Ailuropoda_melanoleuca
ENSFHEG00000003786	snrnp200	97	93.837	ENSACIG00000001764	snrnp200	98	93.837	Amphilophus_citrinellus
ENSFHEG00000003786	snrnp200	100	94.476	ENSAOCG00000024593	snrnp200	100	94.476	Amphiprion_ocellaris
ENSFHEG00000003786	snrnp200	97	93.998	ENSAPEG00000012554	snrnp200	100	93.998	Amphiprion_percula
ENSFHEG00000003786	snrnp200	100	94.476	ENSATEG00000022522	snrnp200	100	94.476	Anabas_testudineus
ENSFHEG00000003786	snrnp200	99	88.072	ENSAPLG00000004313	SNRNP200	100	88.072	Anas_platyrhynchos
ENSFHEG00000003786	snrnp200	99	87.020	ENSACAG00000000434	SNRNP200	100	87.020	Anolis_carolinensis
ENSFHEG00000003786	snrnp200	99	84.353	ENSANAG00000036625	SNRNP200	100	84.166	Aotus_nancymaae
ENSFHEG00000003786	snrnp200	100	94.007	ENSACLG00000011188	snrnp200	100	94.007	Astatotilapia_calliptera
ENSFHEG00000003786	snrnp200	99	91.443	ENSAMXG00000005684	snrnp200	100	91.386	Astyanax_mexicanus
ENSFHEG00000003786	snrnp200	99	87.594	ENSBTAG00000000848	SNRNP200	100	87.594	Bos_taurus
ENSFHEG00000003786	snrnp200	99	87.781	ENSCJAG00000007514	SNRNP200	100	87.781	Callithrix_jacchus
ENSFHEG00000003786	snrnp200	99	89.012	ENSCAFG00020019979	SNRNP200	100	89.012	Canis_lupus_dingo
ENSFHEG00000003786	snrnp200	99	87.547	ENSCHIG00000020611	SNRNP200	100	87.547	Capra_hircus
ENSFHEG00000003786	snrnp200	99	87.828	ENSTSYG00000010467	SNRNP200	100	87.828	Carlito_syrichta
ENSFHEG00000003786	snrnp200	99	87.400	ENSCAPG00000017234	SNRNP200	99	87.400	Cavia_aperea
ENSFHEG00000003786	snrnp200	99	87.687	ENSCPOG00000006776	SNRNP200	100	87.687	Cavia_porcellus
ENSFHEG00000003786	snrnp200	99	87.781	ENSCCAG00000033962	SNRNP200	100	87.781	Cebus_capucinus
ENSFHEG00000003786	snrnp200	99	87.781	ENSCATG00000015790	SNRNP200	100	87.781	Cercocebus_atys
ENSFHEG00000003786	snrnp200	99	87.734	ENSCLAG00000004116	SNRNP200	100	87.734	Chinchilla_lanigera
ENSFHEG00000003786	snrnp200	99	87.828	ENSCSAG00000017369	SNRNP200	100	87.828	Chlorocebus_sabaeus
ENSFHEG00000003786	snrnp200	75	93.701	ENSCHOG00000012981	-	58	93.701	Choloepus_hoffmanni
ENSFHEG00000003786	snrnp200	99	90.307	ENSCPBG00000022571	SNRNP200	100	90.307	Chrysemys_picta_bellii
ENSFHEG00000003786	snrnp200	99	74.008	ENSCING00000005082	-	99	74.102	Ciona_intestinalis
ENSFHEG00000003786	snrnp200	99	82.438	ENSCANG00000033932	SNRNP200	100	87.357	Colobus_angolensis_palliatus
ENSFHEG00000003786	snrnp200	99	87.781	ENSCGRG00001022610	Snrnp200	100	87.781	Cricetulus_griseus_chok1gshd
ENSFHEG00000003786	snrnp200	99	87.284	ENSCGRG00000016472	Snrnp200	100	87.284	Cricetulus_griseus_crigri
ENSFHEG00000003786	snrnp200	99	95.129	ENSCSEG00000016399	snrnp200	100	95.129	Cynoglossus_semilaevis
ENSFHEG00000003786	snrnp200	100	95.729	ENSCVAG00000017631	snrnp200	100	95.729	Cyprinodon_variegatus
ENSFHEG00000003786	snrnp200	100	91.713	ENSDARG00000077536	snrnp200	100	91.713	Danio_rerio
ENSFHEG00000003786	snrnp200	99	86.517	ENSDNOG00000011227	SNRNP200	100	86.517	Dasypus_novemcinctus
ENSFHEG00000003786	snrnp200	99	85.327	ENSDORG00000005861	Snrnp200	100	85.327	Dipodomys_ordii
ENSFHEG00000003786	snrnp200	100	71.661	FBgn0263599	l(3)72Ab	100	71.661	Drosophila_melanogaster
ENSFHEG00000003786	snrnp200	95	86.588	ENSETEG00000000162	SNRNP200	74	86.588	Echinops_telfairi
ENSFHEG00000003786	snrnp200	83	77.040	ENSEBUG00000016524	snrnp200	95	77.040	Eptatretus_burgeri
ENSFHEG00000003786	snrnp200	99	86.807	ENSEASG00005001884	SNRNP200	100	86.713	Equus_asinus_asinus
ENSFHEG00000003786	snrnp200	99	90.019	ENSECAG00000019675	SNRNP200	100	90.019	Equus_caballus
ENSFHEG00000003786	snrnp200	91	96.970	ENSEEUG00000012178	SNRNP200	93	96.970	Erinaceus_europaeus
ENSFHEG00000003786	snrnp200	100	92.981	ENSELUG00000018948	snrnp200	100	92.981	Esox_lucius
ENSFHEG00000003786	snrnp200	99	90.067	ENSFCAG00000010699	SNRNP200	100	90.067	Felis_catus
ENSFHEG00000003786	snrnp200	93	86.607	ENSFALG00000001368	-	94	86.607	Ficedula_albicollis
ENSFHEG00000003786	snrnp200	99	87.640	ENSFDAG00000004683	SNRNP200	100	87.640	Fukomys_damarensis
ENSFHEG00000003786	snrnp200	100	92.056	ENSGMOG00000004881	snrnp200	99	91.916	Gadus_morhua
ENSFHEG00000003786	snrnp200	100	98.704	ENSGAFG00000010807	snrnp200	100	98.704	Gambusia_affinis
ENSFHEG00000003786	snrnp200	100	93.788	ENSGACG00000011474	snrnp200	99	93.788	Gasterosteus_aculeatus
ENSFHEG00000003786	snrnp200	95	91.365	ENSGAGG00000016069	SNRNP200	98	96.774	Gopherus_agassizii
ENSFHEG00000003786	snrnp200	99	87.781	ENSGGOG00000005174	SNRNP200	97	92.262	Gorilla_gorilla
ENSFHEG00000003786	snrnp200	97	91.346	ENSHBUG00000011322	snrnp200	99	91.346	Haplochromis_burtoni
ENSFHEG00000003786	snrnp200	99	87.687	ENSHGLG00000006654	SNRNP200	100	87.687	Heterocephalus_glaber_female
ENSFHEG00000003786	snrnp200	99	87.687	ENSHGLG00100018594	SNRNP200	100	87.687	Heterocephalus_glaber_male
ENSFHEG00000003786	snrnp200	99	87.875	ENSSTOG00000016351	SNRNP200	100	87.875	Ictidomys_tridecemlineatus
ENSFHEG00000003786	snrnp200	99	87.594	ENSJJAG00000023659	Snrnp200	100	87.594	Jaculus_jaculus
ENSFHEG00000003786	snrnp200	100	96.844	ENSKMAG00000003665	snrnp200	100	96.844	Kryptolebias_marmoratus
ENSFHEG00000003786	snrnp200	100	94.335	ENSLBEG00000021585	snrnp200	100	94.335	Labrus_bergylta
ENSFHEG00000003786	snrnp200	81	89.169	ENSLACG00000000226	SNRNP200	100	89.169	Latimeria_chalumnae
ENSFHEG00000003786	snrnp200	100	91.113	ENSLOCG00000015198	snrnp200	100	91.113	Lepisosteus_oculatus
ENSFHEG00000003786	snrnp200	99	87.734	ENSLAFG00000015626	SNRNP200	100	87.734	Loxodonta_africana
ENSFHEG00000003786	snrnp200	99	87.734	ENSMFAG00000040174	SNRNP200	99	91.860	Macaca_fascicularis
ENSFHEG00000003786	snrnp200	99	87.734	ENSMMUG00000023261	SNRNP200	100	87.734	Macaca_mulatta
ENSFHEG00000003786	snrnp200	99	87.687	ENSMNEG00000032398	SNRNP200	100	87.687	Macaca_nemestrina
ENSFHEG00000003786	snrnp200	99	87.781	ENSMLEG00000019083	SNRNP200	99	91.860	Mandrillus_leucophaeus
ENSFHEG00000003786	snrnp200	100	94.436	ENSMAMG00000007851	snrnp200	100	94.293	Mastacembelus_armatus
ENSFHEG00000003786	snrnp200	97	91.346	ENSMZEG00005010787	snrnp200	99	91.346	Maylandia_zebra
ENSFHEG00000003786	snrnp200	97	87.712	ENSMGAG00000001831	SNRNP200	99	87.707	Meleagris_gallopavo
ENSFHEG00000003786	snrnp200	99	87.828	ENSMAUG00000011825	Snrnp200	100	87.828	Mesocricetus_auratus
ENSFHEG00000003786	snrnp200	99	87.828	ENSMICG00000004710	SNRNP200	98	91.549	Microcebus_murinus
ENSFHEG00000003786	snrnp200	99	86.049	ENSMOCG00000011814	Snrnp200	100	86.049	Microtus_ochrogaster
ENSFHEG00000003786	snrnp200	99	92.055	ENSMMOG00000014167	snrnp200	100	91.994	Mola_mola
ENSFHEG00000003786	snrnp200	99	88.015	ENSMODG00000008475	SNRNP200	100	88.015	Monodelphis_domestica
ENSFHEG00000003786	snrnp200	100	94.242	ENSMALG00000001973	snrnp200	100	94.242	Monopterus_albus
ENSFHEG00000003786	snrnp200	99	87.687	MGP_CAROLIEiJ_G0024250	Snrnp200	100	87.687	Mus_caroli
ENSFHEG00000003786	snrnp200	99	87.734	ENSMUSG00000003660	Snrnp200	100	87.734	Mus_musculus
ENSFHEG00000003786	snrnp200	99	87.734	MGP_PahariEiJ_G0025695	Snrnp200	100	87.734	Mus_pahari
ENSFHEG00000003786	snrnp200	99	87.734	MGP_SPRETEiJ_G0025170	Snrnp200	100	90.055	Mus_spretus
ENSFHEG00000003786	snrnp200	99	87.875	ENSMPUG00000008949	SNRNP200	100	87.875	Mustela_putorius_furo
ENSFHEG00000003786	snrnp200	99	84.691	ENSMLUG00000027511	-	100	84.691	Myotis_lucifugus
ENSFHEG00000003786	snrnp200	99	87.518	ENSMLUG00000010493	SNRNP200	100	87.518	Myotis_lucifugus
ENSFHEG00000003786	snrnp200	99	87.781	ENSNGAG00000021993	Snrnp200	100	87.781	Nannospalax_galili
ENSFHEG00000003786	snrnp200	90	93.674	ENSNBRG00000017960	snrnp200	98	93.674	Neolamprologus_brichardi
ENSFHEG00000003786	snrnp200	99	83.496	ENSNLEG00000000025	SNRNP200	100	83.543	Nomascus_leucogenys
ENSFHEG00000003786	snrnp200	99	92.784	ENSMEUG00000010532	SNRNP200	79	89.524	Notamacropus_eugenii
ENSFHEG00000003786	snrnp200	96	86.625	ENSOPRG00000015464	SNRNP200	100	84.504	Ochotona_princeps
ENSFHEG00000003786	snrnp200	99	87.734	ENSODEG00000008366	SNRNP200	100	87.734	Octodon_degus
ENSFHEG00000003786	snrnp200	100	94.054	ENSONIG00000010714	snrnp200	100	94.054	Oreochromis_niloticus
ENSFHEG00000003786	snrnp200	99	87.734	ENSOCUG00000009864	SNRNP200	100	87.734	Oryctolagus_cuniculus
ENSFHEG00000003786	snrnp200	99	93.674	ENSORLG00000012286	snrnp200	100	93.674	Oryzias_latipes
ENSFHEG00000003786	snrnp200	99	93.768	ENSORLG00020004648	snrnp200	100	93.768	Oryzias_latipes_hni
ENSFHEG00000003786	snrnp200	99	93.674	ENSORLG00015019114	snrnp200	100	93.674	Oryzias_latipes_hsok
ENSFHEG00000003786	snrnp200	100	93.727	ENSOMEG00000011834	snrnp200	100	93.727	Oryzias_melastigma
ENSFHEG00000003786	snrnp200	99	87.828	ENSOGAG00000006879	SNRNP200	100	87.828	Otolemur_garnettii
ENSFHEG00000003786	snrnp200	99	86.898	ENSOARG00000013949	SNRNP200	100	86.898	Ovis_aries
ENSFHEG00000003786	snrnp200	99	87.781	ENSPPAG00000041559	SNRNP200	100	87.781	Pan_paniscus
ENSFHEG00000003786	snrnp200	99	87.875	ENSPPRG00000004435	SNRNP200	100	87.875	Panthera_pardus
ENSFHEG00000003786	snrnp200	99	87.453	ENSPTIG00000006380	SNRNP200	100	87.453	Panthera_tigris_altaica
ENSFHEG00000003786	snrnp200	99	87.781	ENSPTRG00000012230	SNRNP200	100	87.781	Pan_troglodytes
ENSFHEG00000003786	snrnp200	99	87.734	ENSPANG00000006017	SNRNP200	100	87.734	Papio_anubis
ENSFHEG00000003786	snrnp200	100	94.388	ENSPKIG00000014762	snrnp200	100	94.388	Paramormyrops_kingsleyae
ENSFHEG00000003786	snrnp200	99	87.178	ENSPSIG00000008580	SNRNP200	100	87.178	Pelodiscus_sinensis
ENSFHEG00000003786	snrnp200	99	87.921	ENSPCIG00000023050	SNRNP200	100	87.921	Phascolarctos_cinereus
ENSFHEG00000003786	snrnp200	100	96.350	ENSPFOG00000015110	snrnp200	100	96.350	Poecilia_formosa
ENSFHEG00000003786	snrnp200	97	96.095	ENSPLAG00000006711	snrnp200	99	96.095	Poecilia_latipinna
ENSFHEG00000003786	snrnp200	97	96.150	ENSPMEG00000021166	snrnp200	99	96.150	Poecilia_mexicana
ENSFHEG00000003786	snrnp200	100	98.704	ENSPREG00000008875	snrnp200	100	98.704	Poecilia_reticulata
ENSFHEG00000003786	snrnp200	99	87.781	ENSPPYG00000012068	SNRNP200	100	87.781	Pongo_abelii
ENSFHEG00000003786	snrnp200	96	94.872	ENSPCAG00000008536	SNRNP200	86	97.872	Procavia_capensis
ENSFHEG00000003786	snrnp200	99	87.781	ENSPCOG00000024608	SNRNP200	100	87.781	Propithecus_coquereli
ENSFHEG00000003786	snrnp200	95	90.174	ENSPVAG00000005860	SNRNP200	92	90.174	Pteropus_vampyrus
ENSFHEG00000003786	snrnp200	99	93.945	ENSPNYG00000017476	snrnp200	100	93.876	Pundamilia_nyererei
ENSFHEG00000003786	snrnp200	100	91.463	ENSPNAG00000010998	snrnp200	100	91.463	Pygocentrus_nattereri
ENSFHEG00000003786	snrnp200	99	87.828	ENSRNOG00000012157	Snrnp200	100	87.828	Rattus_norvegicus
ENSFHEG00000003786	snrnp200	99	87.781	ENSRBIG00000044690	-	100	87.781	Rhinopithecus_bieti
ENSFHEG00000003786	snrnp200	99	87.781	ENSRROG00000037952	-	100	87.781	Rhinopithecus_roxellana
ENSFHEG00000003786	snrnp200	99	87.781	ENSSBOG00000035471	SNRNP200	97	92.035	Saimiri_boliviensis_boliviensis
ENSFHEG00000003786	snrnp200	97	87.712	ENSSHAG00000000758	SNRNP200	99	87.707	Sarcophilus_harrisii
ENSFHEG00000003786	snrnp200	99	91.917	ENSSFOG00015018826	snrnp200	100	91.858	Scleropages_formosus
ENSFHEG00000003786	snrnp200	100	94.242	ENSSMAG00000005463	snrnp200	100	94.242	Scophthalmus_maximus
ENSFHEG00000003786	snrnp200	100	94.663	ENSSDUG00000021410	snrnp200	100	94.663	Seriola_dumerili
ENSFHEG00000003786	snrnp200	100	94.522	ENSSLDG00000010884	snrnp200	100	94.522	Seriola_lalandi_dorsalis
ENSFHEG00000003786	snrnp200	95	88.204	ENSSARG00000010728	SNRNP200	96	88.172	Sorex_araneus
ENSFHEG00000003786	snrnp200	99	88.296	ENSSPUG00000003726	-	100	88.296	Sphenodon_punctatus
ENSFHEG00000003786	snrnp200	100	94.663	ENSSPAG00000001842	snrnp200	100	94.663	Stegastes_partitus
ENSFHEG00000003786	snrnp200	99	87.875	ENSSSCG00000008127	SNRNP200	100	87.875	Sus_scrofa
ENSFHEG00000003786	snrnp200	99	79.448	ENSTGUG00000014475	-	100	79.448	Taeniopygia_guttata
ENSFHEG00000003786	snrnp200	100	93.399	ENSTRUG00000001307	snrnp200	100	93.399	Takifugu_rubripes
ENSFHEG00000003786	snrnp200	99	88.844	ENSTNIG00000004320	snrnp200	100	81.946	Tetraodon_nigroviridis
ENSFHEG00000003786	snrnp200	81	92.958	ENSTBEG00000003329	-	67	92.958	Tupaia_belangeri
ENSFHEG00000003786	snrnp200	99	87.640	ENSTTRG00000004983	SNRNP200	100	87.640	Tursiops_truncatus
ENSFHEG00000003786	snrnp200	74	78.101	ENSUAMG00000008395	-	95	78.101	Ursus_americanus
ENSFHEG00000003786	snrnp200	99	87.875	ENSUMAG00000012385	SNRNP200	100	87.875	Ursus_maritimus
ENSFHEG00000003786	snrnp200	87	94.595	ENSVPAG00000006434	SNRNP200	66	94.595	Vicugna_pacos
ENSFHEG00000003786	snrnp200	99	90.067	ENSVVUG00000026247	SNRNP200	100	90.067	Vulpes_vulpes
ENSFHEG00000003786	snrnp200	99	87.839	ENSXETG00000001243	snrnp200	100	87.839	Xenopus_tropicalis
ENSFHEG00000003786	snrnp200	97	96.088	ENSXMAG00000002058	snrnp200	98	96.088	Xiphophorus_maculatus