EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSFHEG00000003798 (Gene tree)
Gene ID: 105918477
Gene Symbol: tomm20a
Alias: arid4b|ch1073-321c8.1|wu:fk47b11
Full Name: AT-rich interaction domain 4B
Gene Type: protein_coding
Species: Fundulus_heteroclitus
Status: putative
Strand: Minus strand
Length: 60578 bases
Position: chrKN805845.1:247417-307994
Accession: 105918477
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSFHEP00000002974	Tudor-knot	PF11717.8	2.7e-10	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSFHET00000011324	-	4335	XM_012853558	ENSFHEP00000002974	1295 (aa)	XP_012709012	UPI00064516BC
ENSFHET00000011342	-	4152	XM_021311134	ENSFHEP00000023066	1234 (aa)	XP_021166809	-

Gene Model

Click here to download ENSFHEG00000003798's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSFHEG00000003798's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSFHEG00000003798	tomm20a	86	75.243	ENSG00000054267	ARID4B	85	74.757	Homo_sapiens
ENSFHEG00000003798	tomm20a	100	84.563	ENSAPOG00000010823	tomm20a	100	84.639	Acanthochromis_polyacanthus
ENSFHEG00000003798	tomm20a	99	50.914	ENSAMEG00000008801	ARID4B	54	61.625	Ailuropoda_melanoleuca
ENSFHEG00000003798	tomm20a	93	90.330	ENSACIG00000006313	tomm20a	100	90.330	Amphilophus_citrinellus
ENSFHEG00000003798	tomm20a	100	84.106	ENSAOCG00000003330	tomm20a	100	84.183	Amphiprion_ocellaris
ENSFHEG00000003798	tomm20a	100	84.106	ENSAPEG00000024018	tomm20a	100	84.183	Amphiprion_percula
ENSFHEG00000003798	tomm20a	100	82.851	ENSATEG00000014930	tomm20a	100	83.003	Anabas_testudineus
ENSFHEG00000003798	tomm20a	100	50.463	ENSAPLG00000004422	ARID4B	99	50.508	Anas_platyrhynchos
ENSFHEG00000003798	tomm20a	53	60.367	ENSACAG00000001289	ARID4B	54	61.857	Anolis_carolinensis
ENSFHEG00000003798	tomm20a	54	60.899	ENSANAG00000038088	ARID4B	54	60.610	Aotus_nancymaae
ENSFHEG00000003798	tomm20a	93	81.517	ENSACLG00000023521	tomm20a	100	79.384	Astatotilapia_calliptera
ENSFHEG00000003798	tomm20a	83	77.240	ENSAMXG00000003657	tomm20a	91	76.303	Astyanax_mexicanus
ENSFHEG00000003798	tomm20a	54	60.519	ENSBTAG00000000222	ARID4B	54	60.357	Bos_taurus
ENSFHEG00000003798	tomm20a	54	61.126	ENSCJAG00000018055	ARID4B	99	49.958	Callithrix_jacchus
ENSFHEG00000003798	tomm20a	54	61.878	ENSCAFG00000011439	ARID4B	54	62.011	Canis_familiaris
ENSFHEG00000003798	tomm20a	53	61.313	ENSCAFG00020027130	ARID4B	54	61.441	Canis_lupus_dingo
ENSFHEG00000003798	tomm20a	99	49.524	ENSCHIG00000020742	ARID4B	99	50.000	Capra_hircus
ENSFHEG00000003798	tomm20a	54	61.326	ENSTSYG00000010028	ARID4B	54	61.399	Carlito_syrichta
ENSFHEG00000003798	tomm20a	99	50.880	ENSCPOG00000034766	ARID4B	99	50.259	Cavia_porcellus
ENSFHEG00000003798	tomm20a	54	60.982	ENSCCAG00000021520	ARID4B	54	60.749	Cebus_capucinus
ENSFHEG00000003798	tomm20a	54	61.255	ENSCATG00000042166	ARID4B	54	60.497	Cercocebus_atys
ENSFHEG00000003798	tomm20a	100	52.044	ENSCLAG00000003255	ARID4B	99	51.838	Chinchilla_lanigera
ENSFHEG00000003798	tomm20a	54	61.255	ENSCSAG00000010069	ARID4B	54	60.972	Chlorocebus_sabaeus
ENSFHEG00000003798	tomm20a	54	57.866	ENSCANG00000027498	ARID4B	52	57.123	Colobus_angolensis_palliatus
ENSFHEG00000003798	tomm20a	54	61.247	ENSCGRG00001014397	Arid4b	54	60.773	Cricetulus_griseus_chok1gshd
ENSFHEG00000003798	tomm20a	54	61.224	ENSCGRG00000004910	Arid4b	54	60.749	Cricetulus_griseus_crigri
ENSFHEG00000003798	tomm20a	99	77.066	ENSCSEG00000012928	tomm20a	98	77.487	Cynoglossus_semilaevis
ENSFHEG00000003798	tomm20a	100	87.060	ENSCVAG00000003244	tomm20a	100	87.902	Cyprinodon_variegatus
ENSFHEG00000003798	tomm20a	100	65.042	ENSDARG00000090656	tomm20a	99	65.197	Danio_rerio
ENSFHEG00000003798	tomm20a	87	62.466	ENSETEG00000005596	ARID4B	87	61.930	Echinops_telfairi
ENSFHEG00000003798	tomm20a	53	61.560	ENSEASG00005000677	ARID4B	98	50.775	Equus_asinus_asinus
ENSFHEG00000003798	tomm20a	53	61.669	ENSECAG00000017836	ARID4B	54	61.592	Equus_caballus
ENSFHEG00000003798	tomm20a	65	54.703	ENSELUG00000018441	tomm20a	91	54.009	Esox_lucius
ENSFHEG00000003798	tomm20a	54	61.392	ENSFCAG00000030096	ARID4B	99	51.734	Felis_catus
ENSFHEG00000003798	tomm20a	100	51.241	ENSFALG00000013548	ARID4B	97	51.792	Ficedula_albicollis
ENSFHEG00000003798	tomm20a	91	74.704	ENSGMOG00000018747	tomm20a	91	75.299	Gadus_morhua
ENSFHEG00000003798	tomm20a	99	75.094	ENSGACG00000004298	tomm20a	100	75.714	Gasterosteus_aculeatus
ENSFHEG00000003798	tomm20a	100	50.402	ENSGAGG00000020544	ARID4B	97	50.636	Gopherus_agassizii
ENSFHEG00000003798	tomm20a	54	60.846	ENSGGOG00000022080	ARID4B	54	60.779	Gorilla_gorilla
ENSFHEG00000003798	tomm20a	100	81.895	ENSHBUG00000020369	tomm20a	100	82.047	Haplochromis_burtoni
ENSFHEG00000003798	tomm20a	100	50.840	ENSHGLG00000012546	ARID4B	54	60.585	Heterocephalus_glaber_female
ENSFHEG00000003798	tomm20a	100	50.840	ENSHGLG00100015436	ARID4B	54	60.585	Heterocephalus_glaber_male
ENSFHEG00000003798	tomm20a	96	81.699	ENSHCOG00000010376	tomm20a	100	81.046	Hippocampus_comes
ENSFHEG00000003798	tomm20a	100	63.158	ENSIPUG00000014234	arid4b	99	63.150	Ictalurus_punctatus
ENSFHEG00000003798	tomm20a	100	51.447	ENSSTOG00000002810	ARID4B	54	61.250	Ictidomys_tridecemlineatus
ENSFHEG00000003798	tomm20a	53	60.504	ENSJJAG00000021368	Arid4b	54	60.729	Jaculus_jaculus
ENSFHEG00000003798	tomm20a	90	73.856	ENSKMAG00000010987	tomm20a	98	76.409	Kryptolebias_marmoratus
ENSFHEG00000003798	tomm20a	100	61.161	ENSLOCG00000015899	tomm20a	99	61.738	Lepisosteus_oculatus
ENSFHEG00000003798	tomm20a	54	60.972	ENSLAFG00000014295	ARID4B	99	50.626	Loxodonta_africana
ENSFHEG00000003798	tomm20a	54	61.255	ENSMFAG00000044016	ARID4B	54	60.972	Macaca_fascicularis
ENSFHEG00000003798	tomm20a	54	61.255	ENSMMUG00000007141	ARID4B	54	60.972	Macaca_mulatta
ENSFHEG00000003798	tomm20a	53	61.157	ENSMLEG00000033583	ARID4B	54	60.870	Mandrillus_leucophaeus
ENSFHEG00000003798	tomm20a	93	81.357	ENSMAMG00000017134	tomm20a	99	81.773	Mastacembelus_armatus
ENSFHEG00000003798	tomm20a	100	81.742	ENSMZEG00005009879	tomm20a	100	81.895	Maylandia_zebra
ENSFHEG00000003798	tomm20a	100	50.468	ENSMGAG00000011896	ARID4B	99	51.385	Meleagris_gallopavo
ENSFHEG00000003798	tomm20a	54	62.083	ENSMICG00000016358	ARID4B	54	61.026	Microcebus_murinus
ENSFHEG00000003798	tomm20a	93	85.120	ENSMMOG00000000561	tomm20a	98	84.245	Mola_mola
ENSFHEG00000003798	tomm20a	100	51.191	ENSMODG00000008417	ARID4B	99	52.132	Monodelphis_domestica
ENSFHEG00000003798	tomm20a	100	82.470	ENSMALG00000005205	tomm20a	100	82.698	Monopterus_albus
ENSFHEG00000003798	tomm20a	54	60.428	MGP_CAROLIEiJ_G0018236	Arid4b	54	60.888	Mus_caroli
ENSFHEG00000003798	tomm20a	100	50.728	ENSMUSG00000039219	Arid4b	99	51.072	Mus_musculus
ENSFHEG00000003798	tomm20a	53	60.300	MGP_PahariEiJ_G0019286	Arid4b	54	60.166	Mus_pahari
ENSFHEG00000003798	tomm20a	100	50.465	MGP_SPRETEiJ_G0019094	Arid4b	99	51.293	Mus_spretus
ENSFHEG00000003798	tomm20a	100	51.754	ENSMPUG00000002906	ARID4B	54	61.785	Mustela_putorius_furo
ENSFHEG00000003798	tomm20a	100	51.353	ENSNGAG00000014629	Arid4b	99	50.814	Nannospalax_galili
ENSFHEG00000003798	tomm20a	93	87.294	ENSNBRG00000019684	tomm20a	100	89.882	Neolamprologus_brichardi
ENSFHEG00000003798	tomm20a	54	61.255	ENSNLEG00000002665	ARID4B	54	60.809	Nomascus_leucogenys
ENSFHEG00000003798	tomm20a	100	51.702	ENSODEG00000005373	ARID4B	99	51.994	Octodon_degus
ENSFHEG00000003798	tomm20a	54	61.591	ENSOCUG00000006605	ARID4B	99	51.437	Oryctolagus_cuniculus
ENSFHEG00000003798	tomm20a	100	76.923	ENSORLG00000012510	tomm20a	100	76.771	Oryzias_latipes
ENSFHEG00000003798	tomm20a	92	84.951	ENSORLG00020013988	tomm20a	100	86.408	Oryzias_latipes_hni
ENSFHEG00000003798	tomm20a	92	85.366	ENSORLG00015022835	tomm20a	100	86.341	Oryzias_latipes_hsok
ENSFHEG00000003798	tomm20a	100	77.659	ENSOMEG00000000521	tomm20a	100	77.846	Oryzias_melastigma
ENSFHEG00000003798	tomm20a	99	51.144	ENSOARG00000003481	ARID4B	97	51.513	Ovis_aries
ENSFHEG00000003798	tomm20a	54	60.846	ENSPPAG00000031651	ARID4B	54	60.972	Pan_paniscus
ENSFHEG00000003798	tomm20a	54	61.931	ENSPPRG00000013739	ARID4B	99	51.780	Panthera_pardus
ENSFHEG00000003798	tomm20a	54	61.983	ENSPTIG00000012520	ARID4B	99	52.449	Panthera_tigris_altaica
ENSFHEG00000003798	tomm20a	54	60.846	ENSPTRG00000002129	ARID4B	54	60.972	Pan_troglodytes
ENSFHEG00000003798	tomm20a	54	59.863	ENSPANG00000013611	ARID4B	54	60.251	Papio_anubis
ENSFHEG00000003798	tomm20a	93	48.151	ENSPSIG00000011632	ARID4B	99	48.157	Pelodiscus_sinensis
ENSFHEG00000003798	tomm20a	92	71.175	ENSPCIG00000029756	ARID4B	99	52.045	Phascolarctos_cinereus
ENSFHEG00000003798	tomm20a	100	88.388	ENSPFOG00000019430	tomm20a	100	88.464	Poecilia_formosa
ENSFHEG00000003798	tomm20a	100	88.312	ENSPLAG00000010554	tomm20a	100	88.388	Poecilia_latipinna
ENSFHEG00000003798	tomm20a	100	86.228	ENSPMEG00000003093	tomm20a	100	82.476	Poecilia_mexicana
ENSFHEG00000003798	tomm20a	100	88.199	ENSPREG00000007996	tomm20a	100	88.506	Poecilia_reticulata
ENSFHEG00000003798	tomm20a	54	60.982	ENSPPYG00000000098	ARID4B	54	61.111	Pongo_abelii
ENSFHEG00000003798	tomm20a	77	61.111	ENSPVAG00000015159	ARID4B	88	61.080	Pteropus_vampyrus
ENSFHEG00000003798	tomm20a	99	75.229	ENSPNYG00000013988	tomm20a	100	76.988	Pundamilia_nyererei
ENSFHEG00000003798	tomm20a	100	66.114	ENSPNAG00000000523	tomm20a	92	66.208	Pygocentrus_nattereri
ENSFHEG00000003798	tomm20a	87	46.103	ENSRNOG00000016391	LOC100912163	96	46.211	Rattus_norvegicus
ENSFHEG00000003798	tomm20a	88	59.557	ENSRBIG00000042029	ARID4B	87	59.155	Rhinopithecus_bieti
ENSFHEG00000003798	tomm20a	54	61.119	ENSRROG00000045203	ARID4B	54	60.304	Rhinopithecus_roxellana
ENSFHEG00000003798	tomm20a	54	59.511	ENSSHAG00000015214	ARID4B	99	51.170	Sarcophilus_harrisii
ENSFHEG00000003798	tomm20a	75	50.398	ENSSFOG00015008923	tomm20a	98	51.475	Scleropages_formosus
ENSFHEG00000003798	tomm20a	100	60.300	ENSSFOG00015000132	arid4b	99	61.221	Scleropages_formosus
ENSFHEG00000003798	tomm20a	100	80.015	ENSSMAG00000010430	tomm20a	100	80.992	Scophthalmus_maximus
ENSFHEG00000003798	tomm20a	100	84.692	ENSSDUG00000003019	tomm20a	100	84.768	Seriola_dumerili
ENSFHEG00000003798	tomm20a	100	50.683	ENSSPUG00000015466	ARID4B	97	50.554	Sphenodon_punctatus
ENSFHEG00000003798	tomm20a	100	83.498	ENSSPAG00000007358	tomm20a	100	83.650	Stegastes_partitus
ENSFHEG00000003798	tomm20a	54	61.602	ENSSSCG00000010156	ARID4B	62	61.142	Sus_scrofa
ENSFHEG00000003798	tomm20a	69	69.793	ENSTRUG00000002893	tomm20a	100	69.508	Takifugu_rubripes
ENSFHEG00000003798	tomm20a	74	68.550	ENSTBEG00000003961	ARID4B	66	68.059	Tupaia_belangeri
ENSFHEG00000003798	tomm20a	54	60.302	ENSTTRG00000002228	ARID4B	54	60.000	Tursiops_truncatus
ENSFHEG00000003798	tomm20a	53	59.207	ENSUMAG00000006905	ARID4B	53	59.599	Ursus_maritimus
ENSFHEG00000003798	tomm20a	69	59.414	ENSVPAG00000006841	ARID4B	68	59.610	Vicugna_pacos
ENSFHEG00000003798	tomm20a	53	59.605	ENSVVUG00000008154	ARID4B	53	59.571	Vulpes_vulpes
ENSFHEG00000003798	tomm20a	100	88.046	ENSXMAG00000006538	tomm20a	100	88.352	Xiphophorus_maculatus