EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSFHEG00000003856 (Gene tree)
Gene ID: 105918471
Gene Symbol: -
Alias: -
Full Name: zinc finger and BTB domain-containing protein 49-like
Gene Type: protein_coding
Species: Fundulus_heteroclitus
Status: putative
Strand: Plus strand
Length: 12107 bases
Position: chrKN805844.1:45832-57938
Accession: 105918471
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSFHEP00000003028	zf-C2H2	PF00096.26	6.5e-19	1	3
ENSFHEP00000003028	zf-C2H2	PF00096.26	6.5e-19	2	3
ENSFHEP00000003028	zf-C2H2	PF00096.26	6.5e-19	3	3
ENSFHEP00000003030	zf-C2H2	PF00096.26	6.5e-19	1	3
ENSFHEP00000003030	zf-C2H2	PF00096.26	6.5e-19	2	3
ENSFHEP00000003030	zf-C2H2	PF00096.26	6.5e-19	3	3
ENSFHEP00000003028	zf-met	PF12874.7	7.8e-08	1	2
ENSFHEP00000003028	zf-met	PF12874.7	7.8e-08	2	2
ENSFHEP00000003030	zf-met	PF12874.7	7.8e-08	1	2
ENSFHEP00000003030	zf-met	PF12874.7	7.8e-08	2	2

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSFHET00000011231	-	1646	-	ENSFHEP00000003028	285 (aa)	-	UPI000644A494
ENSFHET00000011225	-	2341	XM_012853553	ENSFHEP00000003030	285 (aa)	XP_012709007	UPI000644A494

Gene Model

Click here to download ENSFHEG00000003856's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSFHEG00000003856's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSFHEG00000003856	-	98	37.500	ENSFHEG00000011378	-	82	32.558

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSFHEG00000003856	-	99	62.414	ENSAOCG00000001971	-	100	62.414	Amphiprion_ocellaris
ENSFHEG00000003856	-	98	39.706	ENSAOCG00000020652	-	100	39.706	Amphiprion_ocellaris
ENSFHEG00000003856	-	99	62.414	ENSAPEG00000011156	-	86	62.414	Amphiprion_percula
ENSFHEG00000003856	-	99	73.103	ENSCVAG00000000161	-	99	73.103	Cyprinodon_variegatus
ENSFHEG00000003856	-	99	69.550	ENSGAFG00000000549	-	100	69.550	Gambusia_affinis
ENSFHEG00000003856	-	98	32.660	ENSLBEG00000008850	-	99	37.778	Labrus_bergylta
ENSFHEG00000003856	-	97	42.045	ENSMALG00000005696	-	99	42.045	Monopterus_albus
ENSFHEG00000003856	-	99	60.616	ENSMALG00000012840	-	100	60.616	Monopterus_albus
ENSFHEG00000003856	-	98	33.216	ENSNBRG00000004792	-	99	33.216	Neolamprologus_brichardi
ENSFHEG00000003856	-	98	47.368	ENSPMGG00000001672	-	93	45.763	Periophthalmus_magnuspinnatus
ENSFHEG00000003856	-	99	69.550	ENSPMEG00000004752	-	100	69.550	Poecilia_mexicana
ENSFHEG00000003856	-	98	30.769	ENSSMAG00000006902	-	91	30.769	Scophthalmus_maximus
ENSFHEG00000003856	-	98	32.095	ENSSDUG00000022035	-	100	39.773	Seriola_dumerili
ENSFHEG00000003856	-	98	32.770	ENSSLDG00000025676	-	100	39.773	Seriola_lalandi_dorsalis
ENSFHEG00000003856	-	96	47.887	ENSTRUG00000021167	-	97	50.000	Takifugu_rubripes
ENSFHEG00000003856	-	99	70.732	ENSXMAG00000028660	-	100	70.732	Xiphophorus_maculatus