EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSFHEG00000003944 (Gene tree)
Gene ID: 105934487
Gene Symbol: prdm12b
Alias: zgc:101606
Full Name: PR/SET domain 12
Gene Type: protein_coding
Species: Fundulus_heteroclitus
Status: putative
Strand: Plus strand
Length: 4176 bases
Position: chrKN811432.1:1402110-1406285
Accession: 105934487
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSFHEP00000023133	zf-C2H2	PF00096.26	8.7e-13	1	2
ENSFHEP00000023133	zf-C2H2	PF00096.26	8.7e-13	2	2
ENSFHEP00000023133	zf-met	PF12874.7	8.4e-07	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSFHET00000011102	-	2022	XM_012874493	ENSFHEP00000023133	374 (aa)	XP_012729947	UPI000644A8E9

Gene Model

Click here to download ENSFHEG00000003944's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSFHEG00000003944's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSFHEG00000003944	prdm12b	100	75.940	ENSFHEG00000007746	-	100	73.990

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSFHEG00000003944	prdm12b	92	81.686	ENSG00000130711	PRDM12	99	76.517	Homo_sapiens
ENSFHEG00000003944	prdm12b	100	89.091	ENSAPOG00000016051	prdm12b	100	90.130	Acanthochromis_polyacanthus
ENSFHEG00000003944	prdm12b	100	66.138	ENSAPOG00000018234	-	100	65.079	Acanthochromis_polyacanthus
ENSFHEG00000003944	prdm12b	90	80.655	ENSAMEG00000016234	PRDM12	99	80.060	Ailuropoda_melanoleuca
ENSFHEG00000003944	prdm12b	100	78.497	ENSACIG00000005193	-	100	77.865	Amphilophus_citrinellus
ENSFHEG00000003944	prdm12b	100	88.684	ENSACIG00000019578	prdm12b	100	88.158	Amphilophus_citrinellus
ENSFHEG00000003944	prdm12b	100	88.189	ENSAOCG00000015040	prdm12b	100	89.683	Amphiprion_ocellaris
ENSFHEG00000003944	prdm12b	100	88.889	ENSAPEG00000015092	prdm12b	100	91.005	Amphiprion_percula
ENSFHEG00000003944	prdm12b	100	72.959	ENSAPEG00000022849	-	99	72.959	Amphiprion_percula
ENSFHEG00000003944	prdm12b	100	78.351	ENSATEG00000014595	-	96	83.383	Anabas_testudineus
ENSFHEG00000003944	prdm12b	94	80.398	ENSANAG00000020616	PRDM12	95	82.789	Aotus_nancymaae
ENSFHEG00000003944	prdm12b	100	76.000	ENSACLG00000007631	-	100	75.758	Astatotilapia_calliptera
ENSFHEG00000003944	prdm12b	100	87.968	ENSACLG00000011876	prdm12b	100	86.631	Astatotilapia_calliptera
ENSFHEG00000003944	prdm12b	100	81.698	ENSAMXG00000033665	prdm12b	100	81.432	Astyanax_mexicanus
ENSFHEG00000003944	prdm12b	100	80.319	ENSAMXG00000008540	PRDM12	100	80.214	Astyanax_mexicanus
ENSFHEG00000003944	prdm12b	92	81.395	ENSBTAG00000023797	PRDM12	99	77.005	Bos_taurus
ENSFHEG00000003944	prdm12b	92	81.686	ENSCJAG00000020540	PRDM12	99	77.005	Callithrix_jacchus
ENSFHEG00000003944	prdm12b	81	81.788	ENSCAFG00000023076	PRDM12	99	76.647	Canis_familiaris
ENSFHEG00000003944	prdm12b	92	81.686	ENSCAFG00020024046	PRDM12	99	77.128	Canis_lupus_dingo
ENSFHEG00000003944	prdm12b	92	81.686	ENSCHIG00000025005	PRDM12	99	77.273	Capra_hircus
ENSFHEG00000003944	prdm12b	87	81.846	ENSCPOG00000005901	PRDM12	95	81.538	Cavia_porcellus
ENSFHEG00000003944	prdm12b	92	81.686	ENSCCAG00000037485	PRDM12	99	76.800	Cebus_capucinus
ENSFHEG00000003944	prdm12b	92	81.686	ENSCATG00000020327	PRDM12	99	76.800	Cercocebus_atys
ENSFHEG00000003944	prdm12b	90	82.196	ENSCLAG00000005499	PRDM12	89	81.899	Chinchilla_lanigera
ENSFHEG00000003944	prdm12b	92	81.686	ENSCSAG00000014756	PRDM12	99	76.862	Chlorocebus_sabaeus
ENSFHEG00000003944	prdm12b	100	78.989	ENSCPBG00000022628	PRDM12	99	78.610	Chrysemys_picta_bellii
ENSFHEG00000003944	prdm12b	92	81.395	ENSCGRG00001015005	Prdm12	99	75.926	Cricetulus_griseus_chok1gshd
ENSFHEG00000003944	prdm12b	100	77.949	ENSCVAG00000000944	-	100	77.692	Cyprinodon_variegatus
ENSFHEG00000003944	prdm12b	100	95.989	ENSCVAG00000017166	prdm12b	100	95.989	Cyprinodon_variegatus
ENSFHEG00000003944	prdm12b	100	82.400	ENSDARG00000007430	prdm12b	100	81.551	Danio_rerio
ENSFHEG00000003944	prdm12b	90	82.249	ENSDNOG00000042302	PRDM12	99	76.533	Dasypus_novemcinctus
ENSFHEG00000003944	prdm12b	84	66.168	ENSEBUG00000016780	prdm12b	74	66.172	Eptatretus_burgeri
ENSFHEG00000003944	prdm12b	95	80.226	ENSEASG00005008472	PRDM12	99	77.005	Equus_asinus_asinus
ENSFHEG00000003944	prdm12b	95	80.508	ENSECAG00000005933	PRDM12	99	77.005	Equus_caballus
ENSFHEG00000003944	prdm12b	100	81.698	ENSELUG00000009905	prdm12b	100	81.117	Esox_lucius
ENSFHEG00000003944	prdm12b	100	82.940	ENSELUG00000013674	PRDM12	100	83.684	Esox_lucius
ENSFHEG00000003944	prdm12b	92	81.686	ENSFCAG00000043086	PRDM12	99	77.067	Felis_catus
ENSFHEG00000003944	prdm12b	100	80.214	ENSFALG00000001445	PRDM12	89	78.877	Ficedula_albicollis
ENSFHEG00000003944	prdm12b	100	82.632	ENSGMOG00000011797	prdm12b	100	81.316	Gadus_morhua
ENSFHEG00000003944	prdm12b	100	80.214	ENSGALG00000003895	PRDM12	99	78.877	Gallus_gallus
ENSFHEG00000003944	prdm12b	100	92.368	ENSGAFG00000010827	prdm12b	99	93.421	Gambusia_affinis
ENSFHEG00000003944	prdm12b	100	88.830	ENSGACG00000016713	prdm12b	99	86.133	Gasterosteus_aculeatus
ENSFHEG00000003944	prdm12b	100	79.255	ENSGAGG00000014083	PRDM12	99	78.610	Gopherus_agassizii
ENSFHEG00000003944	prdm12b	92	81.395	ENSGGOG00000010568	PRDM12	99	75.661	Gorilla_gorilla
ENSFHEG00000003944	prdm12b	100	76.000	ENSHBUG00000022537	-	93	75.758	Haplochromis_burtoni
ENSFHEG00000003944	prdm12b	100	91.247	ENSHBUG00000022878	prdm12b	100	87.798	Haplochromis_burtoni
ENSFHEG00000003944	prdm12b	90	82.493	ENSHGLG00000013939	PRDM12	99	75.862	Heterocephalus_glaber_female
ENSFHEG00000003944	prdm12b	100	71.916	ENSHCOG00000021167	-	100	70.341	Hippocampus_comes
ENSFHEG00000003944	prdm12b	90	85.549	ENSHCOG00000003663	prdm12b	100	79.293	Hippocampus_comes
ENSFHEG00000003944	prdm12b	100	84.267	ENSIPUG00000017053	prdm12b	100	83.467	Ictalurus_punctatus
ENSFHEG00000003944	prdm12b	100	78.877	ENSIPUG00000019544	PRDM12	100	78.877	Ictalurus_punctatus
ENSFHEG00000003944	prdm12b	96	79.888	ENSSTOG00000005986	PRDM12	85	82.789	Ictidomys_tridecemlineatus
ENSFHEG00000003944	prdm12b	90	82.789	ENSJJAG00000005424	Prdm12	98	82.493	Jaculus_jaculus
ENSFHEG00000003944	prdm12b	94	78.249	ENSKMAG00000021205	-	93	78.249	Kryptolebias_marmoratus
ENSFHEG00000003944	prdm12b	100	81.327	ENSKMAG00000016921	prdm12b	100	82.064	Kryptolebias_marmoratus
ENSFHEG00000003944	prdm12b	100	88.976	ENSLBEG00000017769	prdm12b	100	88.976	Labrus_bergylta
ENSFHEG00000003944	prdm12b	100	79.112	ENSLBEG00000007776	-	100	78.068	Labrus_bergylta
ENSFHEG00000003944	prdm12b	100	79.947	ENSLACG00000017560	PRDM12	99	78.342	Latimeria_chalumnae
ENSFHEG00000003944	prdm12b	100	81.818	ENSLOCG00000005429	prdm12b	100	81.201	Lepisosteus_oculatus
ENSFHEG00000003944	prdm12b	92	80.814	ENSLAFG00000006979	PRDM12	88	81.287	Loxodonta_africana
ENSFHEG00000003944	prdm12b	100	76.517	ENSMFAG00000040322	PRDM12	99	76.253	Macaca_fascicularis
ENSFHEG00000003944	prdm12b	92	81.686	ENSMNEG00000037234	PRDM12	99	76.800	Macaca_nemestrina
ENSFHEG00000003944	prdm12b	100	73.881	ENSMAMG00000018988	-	100	73.869	Mastacembelus_armatus
ENSFHEG00000003944	prdm12b	100	88.391	ENSMAMG00000013212	prdm12b	100	88.624	Mastacembelus_armatus
ENSFHEG00000003944	prdm12b	100	75.622	ENSMZEG00005000415	PRDM12	100	75.377	Maylandia_zebra
ENSFHEG00000003944	prdm12b	95	81.921	ENSMGAG00000005438	PRDM12	91	84.273	Meleagris_gallopavo
ENSFHEG00000003944	prdm12b	100	76.658	ENSMAUG00000013040	Prdm12	99	75.862	Mesocricetus_auratus
ENSFHEG00000003944	prdm12b	92	81.686	ENSMICG00000015480	PRDM12	99	77.005	Microcebus_murinus
ENSFHEG00000003944	prdm12b	100	76.738	ENSMOCG00000021026	Prdm12	89	82.789	Microtus_ochrogaster
ENSFHEG00000003944	prdm12b	100	78.877	ENSMODG00000012108	PRDM12	99	77.867	Monodelphis_domestica
ENSFHEG00000003944	prdm12b	84	86.349	ENSMALG00000021901	prdm12b	96	84.076	Monopterus_albus
ENSFHEG00000003944	prdm12b	92	81.395	MGP_CAROLIEiJ_G0023414	Prdm12	99	76.393	Mus_caroli
ENSFHEG00000003944	prdm12b	92	81.395	ENSMUSG00000079466	Prdm12	99	76.393	Mus_musculus
ENSFHEG00000003944	prdm12b	92	81.395	MGP_PahariEiJ_G0024871	Prdm12	99	76.393	Mus_pahari
ENSFHEG00000003944	prdm12b	92	81.395	MGP_SPRETEiJ_G0024331	Prdm12	99	76.393	Mus_spretus
ENSFHEG00000003944	prdm12b	90	83.086	ENSNGAG00000018480	Prdm12	99	76.738	Nannospalax_galili
ENSFHEG00000003944	prdm12b	100	88.158	ENSNBRG00000006727	prdm12b	100	87.895	Neolamprologus_brichardi
ENSFHEG00000003944	prdm12b	100	72.063	ENSNBRG00000024312	-	100	72.178	Neolamprologus_brichardi
ENSFHEG00000003944	prdm12b	100	70.588	ENSMEUG00000003828	PRDM12	86	85.417	Notamacropus_eugenii
ENSFHEG00000003944	prdm12b	90	83.086	ENSOPRG00000008680	PRDM12	98	82.789	Ochotona_princeps
ENSFHEG00000003944	prdm12b	90	82.493	ENSODEG00000016282	PRDM12	61	81.711	Octodon_degus
ENSFHEG00000003944	prdm12b	63	77.021	ENSOANG00000001043	PRDM12	100	75.319	Ornithorhynchus_anatinus
ENSFHEG00000003944	prdm12b	83	81.731	ENSOCUG00000008241	PRDM12	96	81.731	Oryctolagus_cuniculus
ENSFHEG00000003944	prdm12b	100	76.786	ENSORLG00000017558	-	100	77.041	Oryzias_latipes
ENSFHEG00000003944	prdm12b	100	87.664	ENSORLG00000007114	prdm12b	99	86.316	Oryzias_latipes
ENSFHEG00000003944	prdm12b	100	86.911	ENSORLG00020019565	prdm12b	99	86.126	Oryzias_latipes_hni
ENSFHEG00000003944	prdm12b	100	76.590	ENSORLG00020013167	-	100	76.590	Oryzias_latipes_hni
ENSFHEG00000003944	prdm12b	100	76.786	ENSORLG00015003435	-	100	77.041	Oryzias_latipes_hsok
ENSFHEG00000003944	prdm12b	100	86.544	ENSORLG00015007621	prdm12b	99	86.544	Oryzias_latipes_hsok
ENSFHEG00000003944	prdm12b	100	86.945	ENSOMEG00000004134	prdm12b	99	86.684	Oryzias_melastigma
ENSFHEG00000003944	prdm12b	100	77.344	ENSOMEG00000007762	-	100	77.344	Oryzias_melastigma
ENSFHEG00000003944	prdm12b	92	81.686	ENSOGAG00000007557	PRDM12	97	82.789	Otolemur_garnettii
ENSFHEG00000003944	prdm12b	80	80.936	ENSPPAG00000031506	-	99	79.344	Pan_paniscus
ENSFHEG00000003944	prdm12b	100	71.467	ENSPPRG00000023024	PRDM12	83	76.331	Panthera_pardus
ENSFHEG00000003944	prdm12b	92	81.686	ENSPTRG00000043324	-	99	75.926	Pan_troglodytes
ENSFHEG00000003944	prdm12b	92	81.686	ENSPTRG00000021475	PRDM12	99	75.926	Pan_troglodytes
ENSFHEG00000003944	prdm12b	92	81.686	ENSPANG00000025967	PRDM12	99	76.800	Papio_anubis
ENSFHEG00000003944	prdm12b	100	84.000	ENSPKIG00000007228	prdm12b	100	84.000	Paramormyrops_kingsleyae
ENSFHEG00000003944	prdm12b	90	80.119	ENSPKIG00000004305	PRDM12	94	79.525	Paramormyrops_kingsleyae
ENSFHEG00000003944	prdm12b	100	78.723	ENSPSIG00000006739	PRDM12	99	78.075	Pelodiscus_sinensis
ENSFHEG00000003944	prdm12b	100	75.127	ENSPMGG00000002356	-	100	74.365	Periophthalmus_magnuspinnatus
ENSFHEG00000003944	prdm12b	100	87.467	ENSPMGG00000008867	prdm12b	99	86.400	Periophthalmus_magnuspinnatus
ENSFHEG00000003944	prdm12b	96	78.320	ENSPEMG00000009969	Prdm12	89	82.493	Peromyscus_maniculatus_bairdii
ENSFHEG00000003944	prdm12b	100	78.877	ENSPCIG00000024119	PRDM12	99	77.867	Phascolarctos_cinereus
ENSFHEG00000003944	prdm12b	100	94.947	ENSPFOG00000019841	prdm12b	100	94.947	Poecilia_formosa
ENSFHEG00000003944	prdm12b	100	92.167	ENSPLAG00000016626	prdm12b	99	93.211	Poecilia_latipinna
ENSFHEG00000003944	prdm12b	97	92.432	ENSPMEG00000016698	prdm12b	99	93.243	Poecilia_mexicana
ENSFHEG00000003944	prdm12b	100	91.667	ENSPREG00000015073	prdm12b	99	92.969	Poecilia_reticulata
ENSFHEG00000003944	prdm12b	95	74.033	ENSPREG00000003211	-	94	73.204	Poecilia_reticulata
ENSFHEG00000003944	prdm12b	94	80.682	ENSPPYG00000019694	PRDM12	92	82.789	Pongo_abelii
ENSFHEG00000003944	prdm12b	92	81.686	ENSPCOG00000022255	PRDM12	99	76.190	Propithecus_coquereli
ENSFHEG00000003944	prdm12b	92	81.395	ENSPVAG00000001511	PRDM12	99	76.455	Pteropus_vampyrus
ENSFHEG00000003944	prdm12b	100	89.182	ENSPNYG00000009607	prdm12b	100	88.127	Pundamilia_nyererei
ENSFHEG00000003944	prdm12b	100	75.622	ENSPNYG00000013589	-	100	75.377	Pundamilia_nyererei
ENSFHEG00000003944	prdm12b	100	78.478	ENSPNAG00000013396	PRDM12	100	78.215	Pygocentrus_nattereri
ENSFHEG00000003944	prdm12b	100	82.667	ENSPNAG00000024532	prdm12b	100	82.400	Pygocentrus_nattereri
ENSFHEG00000003944	prdm12b	92	81.395	ENSRNOG00000009218	Prdm12	99	76.393	Rattus_norvegicus
ENSFHEG00000003944	prdm12b	88	82.979	ENSRBIG00000042712	PRDM12	91	80.814	Rhinopithecus_bieti
ENSFHEG00000003944	prdm12b	89	83.183	ENSRROG00000043554	PRDM12	99	82.883	Rhinopithecus_roxellana
ENSFHEG00000003944	prdm12b	100	78.133	ENSSHAG00000015972	PRDM12	99	77.128	Sarcophilus_harrisii
ENSFHEG00000003944	prdm12b	100	85.897	ENSSMAG00000003754	prdm12b	100	85.422	Scophthalmus_maximus
ENSFHEG00000003944	prdm12b	100	79.534	ENSSDUG00000019071	-	100	79.275	Seriola_dumerili
ENSFHEG00000003944	prdm12b	100	88.052	ENSSDUG00000023498	prdm12b	100	87.013	Seriola_dumerili
ENSFHEG00000003944	prdm12b	100	77.867	ENSSLDG00000013562	-	100	77.600	Seriola_lalandi_dorsalis
ENSFHEG00000003944	prdm12b	100	89.529	ENSSLDG00000009557	prdm12b	100	89.791	Seriola_lalandi_dorsalis
ENSFHEG00000003944	prdm12b	100	78.342	ENSSPUG00000013424	PRDM12	99	77.540	Sphenodon_punctatus
ENSFHEG00000003944	prdm12b	100	70.649	ENSSPAG00000022420	-	100	70.390	Stegastes_partitus
ENSFHEG00000003944	prdm12b	100	87.173	ENSSPAG00000018824	prdm12b	100	88.391	Stegastes_partitus
ENSFHEG00000003944	prdm12b	92	81.686	ENSSSCG00000005703	PRDM12	99	77.128	Sus_scrofa
ENSFHEG00000003944	prdm12b	100	78.400	ENSTRUG00000013239	-	100	77.867	Takifugu_rubripes
ENSFHEG00000003944	prdm12b	100	86.702	ENSTRUG00000018659	prdm12b	100	84.840	Takifugu_rubripes
ENSFHEG00000003944	prdm12b	100	75.862	ENSTNIG00000005859	-	99	75.066	Tetraodon_nigroviridis
ENSFHEG00000003944	prdm12b	100	86.170	ENSTNIG00000009020	prdm12b	99	84.309	Tetraodon_nigroviridis
ENSFHEG00000003944	prdm12b	92	81.686	ENSUAMG00000009653	PRDM12	90	82.789	Ursus_americanus
ENSFHEG00000003944	prdm12b	92	81.686	ENSVVUG00000027662	PRDM12	77	82.789	Vulpes_vulpes
ENSFHEG00000003944	prdm12b	100	92.593	ENSXCOG00000002836	prdm12b	99	93.915	Xiphophorus_couchianus
ENSFHEG00000003944	prdm12b	100	93.651	ENSXMAG00000005537	prdm12b	100	94.974	Xiphophorus_maculatus
ENSFHEG00000003944	prdm12b	100	74.442	ENSXMAG00000028012	-	100	74.250	Xiphophorus_maculatus