EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSFHEG00000004105 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: serrate RNA effector molecule homolog
Gene Type: protein_coding
Species: Fundulus_heteroclitus
Status: putative
Strand: Minus strand
Length: 6666 bases
Position: chrKN808431.1:3560-10225
Accession: 105924150
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSFHEP00000023228	ARS2	PF04959.13	8.7e-81	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSFHET00000010884	-	1407	XM_012860035	ENSFHEP00000023228	468 (aa)	XP_012715489	-

Gene Model

Click here to download ENSFHEG00000004105's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSFHEG00000004105's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSFHEG00000004105	-	82	61.330	ENSFHEG00000002756	srrt	54	62.315

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSFHEG00000004105	-	93	56.438	ENSG00000087087	SRRT	95	55.464	Homo_sapiens
ENSFHEG00000004105	-	93	56.992	ENSAPOG00000002304	srrt	56	55.131	Acanthochromis_polyacanthus
ENSFHEG00000004105	-	93	57.112	ENSAMEG00000014506	SRRT	53	56.108	Ailuropoda_melanoleuca
ENSFHEG00000004105	-	93	56.780	ENSACIG00000015795	srrt	58	56.612	Amphilophus_citrinellus
ENSFHEG00000004105	-	93	56.992	ENSAOCG00000009693	srrt	58	57.025	Amphiprion_ocellaris
ENSFHEG00000004105	-	96	76.321	ENSAOCG00000009189	-	53	77.167	Amphiprion_ocellaris
ENSFHEG00000004105	-	96	76.321	ENSAPEG00000020016	-	53	77.167	Amphiprion_percula
ENSFHEG00000004105	-	93	56.780	ENSAPEG00000003646	srrt	59	56.879	Amphiprion_percula
ENSFHEG00000004105	-	96	74.843	ENSATEG00000003652	-	87	76.730	Anabas_testudineus
ENSFHEG00000004105	-	93	57.415	ENSATEG00000014425	srrt	56	57.645	Anabas_testudineus
ENSFHEG00000004105	-	95	55.975	ENSACAG00000001014	SRRT	53	55.975	Anolis_carolinensis
ENSFHEG00000004105	-	93	55.508	ENSANAG00000031718	SRRT	55	54.582	Aotus_nancymaae
ENSFHEG00000004105	-	96	77.516	ENSACLG00000009423	-	53	77.730	Astatotilapia_calliptera
ENSFHEG00000004105	-	93	57.203	ENSACLG00000013156	srrt	50	57.773	Astatotilapia_calliptera
ENSFHEG00000004105	-	92	56.774	ENSAMXG00000016671	srrt	52	56.639	Astyanax_mexicanus
ENSFHEG00000004105	-	93	55.297	ENSBTAG00000001134	SRRT	55	54.379	Bos_taurus
ENSFHEG00000004105	-	70	36.605	WBGene00017085	E01A2.2	85	34.238	Caenorhabditis_elegans
ENSFHEG00000004105	-	93	55.297	ENSCJAG00000014917	SRRT	55	54.379	Callithrix_jacchus
ENSFHEG00000004105	-	93	55.297	ENSCAFG00000023538	SRRT	55	54.175	Canis_familiaris
ENSFHEG00000004105	-	93	56.616	ENSCAFG00020013358	SRRT	57	54.184	Canis_lupus_dingo
ENSFHEG00000004105	-	93	55.437	ENSCHIG00000010495	SRRT	56	54.508	Capra_hircus
ENSFHEG00000004105	-	93	55.957	ENSTSYG00000036426	SRRT	58	55.010	Carlito_syrichta
ENSFHEG00000004105	-	93	56.897	ENSCAPG00000013586	SRRT	93	55.285	Cavia_aperea
ENSFHEG00000004105	-	93	55.180	ENSCPOG00000001739	SRRT	55	54.268	Cavia_porcellus
ENSFHEG00000004105	-	93	55.508	ENSCCAG00000015877	SRRT	55	54.582	Cebus_capucinus
ENSFHEG00000004105	-	93	56.170	ENSCATG00000036306	SRRT	57	53.707	Cercocebus_atys
ENSFHEG00000004105	-	93	56.494	ENSCLAG00000007568	SRRT	93	55.509	Chinchilla_lanigera
ENSFHEG00000004105	-	93	55.508	ENSCSAG00000017996	SRRT	55	54.582	Chlorocebus_sabaeus
ENSFHEG00000004105	-	97	42.178	ENSCING00000003506	-	55	43.232	Ciona_intestinalis
ENSFHEG00000004105	-	94	42.151	ENSCSAVG00000008394	-	57	46.857	Ciona_savignyi
ENSFHEG00000004105	-	93	56.170	ENSCANG00000034556	SRRT	55	55.215	Colobus_angolensis_palliatus
ENSFHEG00000004105	-	93	55.720	ENSCGRG00001001594	Srrt	55	54.564	Cricetulus_griseus_chok1gshd
ENSFHEG00000004105	-	93	56.000	ENSCGRG00000007292	Srrt	93	54.656	Cricetulus_griseus_crigri
ENSFHEG00000004105	-	96	73.629	ENSCSEG00000005233	-	56	75.105	Cynoglossus_semilaevis
ENSFHEG00000004105	-	93	56.710	ENSCSEG00000017878	srrt	50	57.143	Cynoglossus_semilaevis
ENSFHEG00000004105	-	90	80.090	ENSCVAG00000017344	-	53	79.955	Cyprinodon_variegatus
ENSFHEG00000004105	-	93	57.203	ENSCVAG00000019848	srrt	56	57.231	Cyprinodon_variegatus
ENSFHEG00000004105	-	94	58.947	ENSDARG00000017762	srrt	52	58.811	Danio_rerio
ENSFHEG00000004105	-	93	55.508	ENSDNOG00000003851	SRRT	55	54.582	Dasypus_novemcinctus
ENSFHEG00000004105	-	93	57.234	ENSDORG00000005584	Srrt	92	56.495	Dipodomys_ordii
ENSFHEG00000004105	-	93	53.542	ENSETEG00000016175	SRRT	55	53.131	Echinops_telfairi
ENSFHEG00000004105	-	95	53.361	ENSEBUG00000008517	-	66	53.715	Eptatretus_burgeri
ENSFHEG00000004105	-	93	55.508	ENSEASG00005016956	SRRT	55	54.582	Equus_asinus_asinus
ENSFHEG00000004105	-	93	55.508	ENSECAG00000012292	SRRT	55	54.582	Equus_caballus
ENSFHEG00000004105	-	94	59.034	ENSELUG00000006651	srrt	52	58.811	Esox_lucius
ENSFHEG00000004105	-	95	63.692	ENSELUG00000021216	-	55	64.729	Esox_lucius
ENSFHEG00000004105	-	93	55.720	ENSFCAG00000006855	SRRT	55	54.786	Felis_catus
ENSFHEG00000004105	-	93	53.030	ENSFDAG00000021347	SRRT	92	53.222	Fukomys_damarensis
ENSFHEG00000004105	-	94	54.565	ENSGMOG00000018619	srrt	52	55.094	Gadus_morhua
ENSFHEG00000004105	-	96	67.941	ENSGMOG00000018694	-	55	68.153	Gadus_morhua
ENSFHEG00000004105	-	94	76.316	ENSGAFG00000020383	-	55	77.204	Gambusia_affinis
ENSFHEG00000004105	-	93	57.113	ENSGAFG00000005423	srrt	53	57.143	Gambusia_affinis
ENSFHEG00000004105	-	99	55.289	ENSGACG00000020387	srrt	53	56.148	Gasterosteus_aculeatus
ENSFHEG00000004105	-	96	70.062	ENSGACG00000001100	-	54	71.130	Gasterosteus_aculeatus
ENSFHEG00000004105	-	93	56.170	ENSGGOG00000001508	SRRT	59	59.563	Gorilla_gorilla
ENSFHEG00000004105	-	93	56.992	ENSHBUG00000002942	srrt	50	57.563	Haplochromis_burtoni
ENSFHEG00000004105	-	93	55.603	ENSHGLG00000008344	Srrt	93	54.675	Heterocephalus_glaber_female
ENSFHEG00000004105	-	93	56.838	ENSHGLG00100018857	Srrt	93	55.852	Heterocephalus_glaber_male
ENSFHEG00000004105	-	96	56.224	ENSHCOG00000005403	srrt	57	56.341	Hippocampus_comes
ENSFHEG00000004105	-	97	65.966	ENSHCOG00000008904	-	56	68.913	Hippocampus_comes
ENSFHEG00000004105	-	94	58.140	ENSIPUG00000021150	srrt	53	58.058	Ictalurus_punctatus
ENSFHEG00000004105	-	93	56.170	ENSSTOG00000013776	SRRT	55	55.010	Ictidomys_tridecemlineatus
ENSFHEG00000004105	-	93	57.328	ENSJJAG00000010446	Srrt	93	56.468	Jaculus_jaculus
ENSFHEG00000004105	-	96	76.955	ENSKMAG00000008468	-	54	77.572	Kryptolebias_marmoratus
ENSFHEG00000004105	-	96	56.148	ENSKMAG00000013599	srrt	56	57.320	Kryptolebias_marmoratus
ENSFHEG00000004105	-	93	57.325	ENSLBEG00000016308	srrt	55	57.054	Labrus_bergylta
ENSFHEG00000004105	-	93	53.515	ENSLOCG00000013658	srrt	53	55.457	Lepisosteus_oculatus
ENSFHEG00000004105	-	93	55.508	ENSLAFG00000007725	SRRT	55	55.031	Loxodonta_africana
ENSFHEG00000004105	-	93	56.170	ENSMFAG00000033745	SRRT	58	53.707	Macaca_fascicularis
ENSFHEG00000004105	-	93	55.508	ENSMMUG00000021255	SRRT	55	54.582	Macaca_mulatta
ENSFHEG00000004105	-	93	55.508	ENSMNEG00000041864	SRRT	57	53.707	Macaca_nemestrina
ENSFHEG00000004105	-	93	56.170	ENSMLEG00000029479	SRRT	57	53.707	Mandrillus_leucophaeus
ENSFHEG00000004105	-	93	56.596	ENSMAMG00000014311	srrt	53	56.612	Mastacembelus_armatus
ENSFHEG00000004105	-	96	75.899	ENSMAMG00000010681	-	54	77.167	Mastacembelus_armatus
ENSFHEG00000004105	-	93	57.203	ENSMZEG00005016135	srrt	50	57.773	Maylandia_zebra
ENSFHEG00000004105	-	96	76.793	ENSMZEG00005028002	-	53	77.004	Maylandia_zebra
ENSFHEG00000004105	-	93	56.383	ENSMAUG00000011386	Srrt	93	55.624	Mesocricetus_auratus
ENSFHEG00000004105	-	93	55.720	ENSMICG00000009471	SRRT	57	53.908	Microcebus_murinus
ENSFHEG00000004105	-	93	56.809	ENSMOCG00000001971	Srrt	93	55.828	Microtus_ochrogaster
ENSFHEG00000004105	-	94	76.078	ENSMMOG00000011137	-	55	76.940	Mola_mola
ENSFHEG00000004105	-	99	55.152	ENSMMOG00000016399	srrt	54	56.751	Mola_mola
ENSFHEG00000004105	-	93	54.008	ENSMODG00000004862	SRRT	93	53.400	Monodelphis_domestica
ENSFHEG00000004105	-	93	53.863	ENSMALG00000018604	srrt	55	53.138	Monopterus_albus
ENSFHEG00000004105	-	99	64.108	ENSMALG00000005567	-	86	66.381	Monopterus_albus
ENSFHEG00000004105	-	93	57.112	MGP_CAROLIEiJ_G0027870	Srrt	100	59.567	Mus_caroli
ENSFHEG00000004105	-	93	57.112	ENSMUSG00000037364	Srrt	99	59.567	Mus_musculus
ENSFHEG00000004105	-	93	57.112	MGP_PahariEiJ_G0024456	Srrt	100	59.567	Mus_pahari
ENSFHEG00000004105	-	93	57.112	MGP_SPRETEiJ_G0028875	Srrt	100	59.567	Mus_spretus
ENSFHEG00000004105	-	93	55.508	ENSMPUG00000015839	SRRT	55	54.582	Mustela_putorius_furo
ENSFHEG00000004105	-	93	55.508	ENSMLUG00000009975	SRRT	55	54.582	Myotis_lucifugus
ENSFHEG00000004105	-	93	55.508	ENSNGAG00000023715	Srrt	67	54.582	Nannospalax_galili
ENSFHEG00000004105	-	93	56.780	ENSNBRG00000019100	srrt	52	57.143	Neolamprologus_brichardi
ENSFHEG00000004105	-	92	50.110	ENSNLEG00000011987	SRRT	54	46.288	Nomascus_leucogenys
ENSFHEG00000004105	-	93	46.610	ENSMEUG00000011941	SRRT	52	46.822	Notamacropus_eugenii
ENSFHEG00000004105	-	82	54.348	ENSOPRG00000002502	-	51	54.348	Ochotona_princeps
ENSFHEG00000004105	-	93	57.112	ENSODEG00000016856	SRRT	93	55.852	Octodon_degus
ENSFHEG00000004105	-	96	77.101	ENSONIG00000016080	-	53	77.311	Oreochromis_niloticus
ENSFHEG00000004105	-	93	57.203	ENSONIG00000004242	srrt	52	57.380	Oreochromis_niloticus
ENSFHEG00000004105	-	97	57.841	ENSORLG00000008120	srrt	53	58.351	Oryzias_latipes
ENSFHEG00000004105	-	96	57.851	ENSORLG00020003058	srrt	53	58.144	Oryzias_latipes_hni
ENSFHEG00000004105	-	97	57.841	ENSORLG00015008062	srrt	53	58.351	Oryzias_latipes_hsok
ENSFHEG00000004105	-	95	76.395	ENSOMEG00000006963	-	55	77.378	Oryzias_melastigma
ENSFHEG00000004105	-	99	56.287	ENSOMEG00000003155	srrt	57	57.557	Oryzias_melastigma
ENSFHEG00000004105	-	93	55.720	ENSOGAG00000017242	SRRT	55	54.786	Otolemur_garnettii
ENSFHEG00000004105	-	93	55.437	ENSOARG00000015645	SRRT	55	54.508	Ovis_aries
ENSFHEG00000004105	-	93	56.170	ENSPPAG00000041090	SRRT	55	55.215	Pan_paniscus
ENSFHEG00000004105	-	93	56.170	ENSPPRG00000009557	SRRT	55	55.215	Panthera_pardus
ENSFHEG00000004105	-	93	55.720	ENSPTIG00000014355	SRRT	55	54.786	Panthera_tigris_altaica
ENSFHEG00000004105	-	93	56.170	ENSPTRG00000019511	SRRT	55	55.215	Pan_troglodytes
ENSFHEG00000004105	-	93	54.583	ENSPANG00000020763	SRRT	56	53.707	Papio_anubis
ENSFHEG00000004105	-	100	57.058	ENSPKIG00000005434	srrt	55	58.750	Paramormyrops_kingsleyae
ENSFHEG00000004105	-	94	58.439	ENSPKIG00000022212	-	54	57.787	Paramormyrops_kingsleyae
ENSFHEG00000004105	-	93	55.556	ENSPSIG00000016311	SRRT	52	55.556	Pelodiscus_sinensis
ENSFHEG00000004105	-	93	56.632	ENSPMGG00000002841	srrt	57	56.674	Periophthalmus_magnuspinnatus
ENSFHEG00000004105	-	93	57.987	ENSPEMG00000010834	Srrt	93	56.933	Peromyscus_maniculatus_bairdii
ENSFHEG00000004105	-	98	51.186	ENSPMAG00000009614	-	56	52.761	Petromyzon_marinus
ENSFHEG00000004105	-	93	54.717	ENSPCIG00000000816	SRRT	55	54.251	Phascolarctos_cinereus
ENSFHEG00000004105	-	94	76.724	ENSPFOG00000016554	-	56	77.801	Poecilia_formosa
ENSFHEG00000004105	-	93	57.749	ENSPFOG00000005704	srrt	53	57.764	Poecilia_formosa
ENSFHEG00000004105	-	94	76.559	ENSPLAG00000004526	-	56	77.637	Poecilia_latipinna
ENSFHEG00000004105	-	93	57.113	ENSPLAG00000021992	srrt	52	57.143	Poecilia_latipinna
ENSFHEG00000004105	-	89	75.510	ENSPMEG00000001520	-	54	76.667	Poecilia_mexicana
ENSFHEG00000004105	-	93	57.325	ENSPMEG00000001182	srrt	58	57.143	Poecilia_mexicana
ENSFHEG00000004105	-	93	57.962	ENSPREG00000022308	srrt	53	57.971	Poecilia_reticulata
ENSFHEG00000004105	-	76	55.975	ENSPPYG00000017432	SRRT	50	55.975	Pongo_abelii
ENSFHEG00000004105	-	93	55.301	ENSPCAG00000001621	SRRT	55	53.427	Procavia_capensis
ENSFHEG00000004105	-	93	56.383	ENSPCOG00000025751	SRRT	55	55.419	Propithecus_coquereli
ENSFHEG00000004105	-	93	53.602	ENSPVAG00000000834	SRRT	71	52.749	Pteropus_vampyrus
ENSFHEG00000004105	-	93	57.203	ENSPNYG00000018710	srrt	52	57.773	Pundamilia_nyererei
ENSFHEG00000004105	-	83	62.162	ENSPNAG00000010629	srrt	50	50.759	Pygocentrus_nattereri
ENSFHEG00000004105	-	93	55.054	ENSRNOG00000048277	AABR07035787.1	96	54.132	Rattus_norvegicus
ENSFHEG00000004105	-	93	55.508	ENSRBIG00000035718	SRRT	63	59.770	Rhinopithecus_bieti
ENSFHEG00000004105	-	93	55.508	ENSRROG00000030622	SRRT	63	59.770	Rhinopithecus_roxellana
ENSFHEG00000004105	-	93	56.170	ENSSBOG00000033570	SRRT	56	55.215	Saimiri_boliviensis_boliviensis
ENSFHEG00000004105	-	97	53.600	ENSSHAG00000007349	-	77	54.234	Sarcophilus_harrisii
ENSFHEG00000004105	-	93	59.787	ENSSFOG00015017293	srrt	53	59.016	Scleropages_formosus
ENSFHEG00000004105	-	93	58.174	ENSSMAG00000015342	srrt	56	57.557	Scophthalmus_maximus
ENSFHEG00000004105	-	94	71.398	ENSSMAG00000018195	-	58	74.220	Scophthalmus_maximus
ENSFHEG00000004105	-	93	57.839	ENSSDUG00000012049	srrt	55	57.290	Seriola_dumerili
ENSFHEG00000004105	-	96	69.665	ENSSDUG00000002051	-	96	69.729	Seriola_dumerili
ENSFHEG00000004105	-	93	58.458	ENSSLDG00000017477	srrt	55	57.884	Seriola_lalandi_dorsalis
ENSFHEG00000004105	-	94	74.336	ENSSPAG00000018943	-	95	77.007	Stegastes_partitus
ENSFHEG00000004105	-	93	56.632	ENSSPAG00000005665	srrt	51	57.203	Stegastes_partitus
ENSFHEG00000004105	-	82	59.472	ENSSSCG00000024789	SRRT	50	59.472	Sus_scrofa
ENSFHEG00000004105	-	93	54.852	ENSTRUG00000016075	srrt	54	54.268	Takifugu_rubripes
ENSFHEG00000004105	-	91	72.483	ENSTRUG00000000023	-	52	73.182	Takifugu_rubripes
ENSFHEG00000004105	-	98	66.392	ENSTNIG00000003111	-	55	69.295	Tetraodon_nigroviridis
ENSFHEG00000004105	-	93	53.653	ENSTNIG00000011779	srrt	72	54.845	Tetraodon_nigroviridis
ENSFHEG00000004105	-	63	70.625	ENSTNIG00000019765	-	100	70.370	Tetraodon_nigroviridis
ENSFHEG00000004105	-	93	55.508	ENSTTRG00000011104	SRRT	55	54.582	Tursiops_truncatus
ENSFHEG00000004105	-	93	55.508	ENSUAMG00000027997	SRRT	57	54.582	Ursus_americanus
ENSFHEG00000004105	-	93	55.508	ENSUMAG00000011295	SRRT	55	54.582	Ursus_maritimus
ENSFHEG00000004105	-	93	55.297	ENSVVUG00000023572	SRRT	55	54.175	Vulpes_vulpes
ENSFHEG00000004105	-	94	54.176	ENSXETG00000025124	srrt	55	53.975	Xenopus_tropicalis
ENSFHEG00000004105	-	98	73.085	ENSXCOG00000013105	-	94	74.000	Xiphophorus_couchianus
ENSFHEG00000004105	-	94	77.489	ENSXMAG00000002090	-	55	78.344	Xiphophorus_maculatus
ENSFHEG00000004105	-	93	57.537	ENSXMAG00000007627	srrt	58	57.350	Xiphophorus_maculatus