EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSFHEG00000004219 (Gene tree)
Gene ID: 105936829
Gene Symbol: safb
Alias: wu:fb40a03|wu:fd42g06|zgc:55387
Full Name: scaffold attachment factor B2
Gene Type: protein_coding
Species: Fundulus_heteroclitus
Status: putative
Strand: Minus strand
Length: 16562 bases
Position: chrKN811493.1:3626917-3643478
Accession: 105936829
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSFHEP00000023304	RRM_1	PF00076.22	9.1e-12	1	1
ENSFHEP00000023304	SAP	PF02037.27	2e-09	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSFHET00000010683	-	4246	XM_021324200	ENSFHEP00000023304	754 (aa)	XP_021179875	-

Gene Model

Click here to download ENSFHEG00000004219's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSFHEG00000004219's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSFHEG00000004219	safb	94	41.756	ENSG00000160633	SAFB	77	62.810	Homo_sapiens
ENSFHEG00000004219	safb	100	69.194	ENSAPOG00000022508	safb	100	68.275	Acanthochromis_polyacanthus
ENSFHEG00000004219	safb	100	68.222	ENSACIG00000006247	safb	100	69.308	Amphilophus_citrinellus
ENSFHEG00000004219	safb	100	66.007	ENSAOCG00000006308	safb	100	67.298	Amphiprion_ocellaris
ENSFHEG00000004219	safb	100	69.471	ENSAPEG00000023342	safb	100	68.675	Amphiprion_percula
ENSFHEG00000004219	safb	100	68.541	ENSATEG00000004998	safb	100	68.024	Anabas_testudineus
ENSFHEG00000004219	safb	60	38.407	ENSAPLG00000005780	-	69	47.136	Anas_platyrhynchos
ENSFHEG00000004219	safb	94	41.777	ENSANAG00000028821	SAFB	93	38.575	Aotus_nancymaae
ENSFHEG00000004219	safb	100	70.927	ENSACLG00000001926	safb	100	71.178	Astatotilapia_calliptera
ENSFHEG00000004219	safb	66	66.789	ENSAMXG00000018154	safb	66	66.608	Astyanax_mexicanus
ENSFHEG00000004219	safb	57	46.328	ENSCJAG00000017081	SAFB	78	57.265	Callithrix_jacchus
ENSFHEG00000004219	safb	63	46.372	ENSCHIG00000007262	SAFB	54	55.462	Capra_hircus
ENSFHEG00000004219	safb	56	42.063	ENSTSYG00000001851	-	86	40.552	Carlito_syrichta
ENSFHEG00000004219	safb	94	42.212	ENSCCAG00000020193	SAFB	94	37.727	Cebus_capucinus
ENSFHEG00000004219	safb	94	41.756	ENSCATG00000029994	SAFB	94	37.727	Cercocebus_atys
ENSFHEG00000004219	safb	66	40.426	ENSCSAG00000009949	SAFB	94	37.841	Chlorocebus_sabaeus
ENSFHEG00000004219	safb	84	50.000	ENSCPBG00000010936	-	77	50.000	Chrysemys_picta_bellii
ENSFHEG00000004219	safb	90	41.986	ENSCPBG00000010928	-	68	48.299	Chrysemys_picta_bellii
ENSFHEG00000004219	safb	94	36.842	ENSCANG00000004774	-	92	39.205	Colobus_angolensis_palliatus
ENSFHEG00000004219	safb	94	40.904	ENSCANG00000019754	-	93	38.702	Colobus_angolensis_palliatus
ENSFHEG00000004219	safb	99	65.039	ENSCSEG00000019870	safb	100	63.001	Cynoglossus_semilaevis
ENSFHEG00000004219	safb	100	86.640	ENSCVAG00000002226	safb	100	86.640	Cyprinodon_variegatus
ENSFHEG00000004219	safb	97	56.686	ENSDARG00000020467	safb	98	56.257	Danio_rerio
ENSFHEG00000004219	safb	66	40.692	ENSDNOG00000015746	SAFB	65	57.265	Dasypus_novemcinctus
ENSFHEG00000004219	safb	64	53.543	ENSEASG00005023019	SAFB	74	55.556	Equus_asinus_asinus
ENSFHEG00000004219	safb	99	57.833	ENSELUG00000022327	safb	99	56.184	Esox_lucius
ENSFHEG00000004219	safb	100	60.120	ENSGMOG00000014280	safb	100	60.361	Gadus_morhua
ENSFHEG00000004219	safb	66	40.789	ENSGALG00000013365	-	64	47.627	Gallus_gallus
ENSFHEG00000004219	safb	51	59.167	ENSGALG00000001948	-	75	59.167	Gallus_gallus
ENSFHEG00000004219	safb	100	84.304	ENSGAFG00000016162	safb	100	84.304	Gambusia_affinis
ENSFHEG00000004219	safb	100	63.540	ENSGACG00000011385	safb	100	63.744	Gasterosteus_aculeatus
ENSFHEG00000004219	safb	71	49.007	ENSGAGG00000017702	-	87	49.298	Gopherus_agassizii
ENSFHEG00000004219	safb	88	59.167	ENSGAGG00000008424	-	78	59.167	Gopherus_agassizii
ENSFHEG00000004219	safb	94	41.874	ENSGGOG00000015109	SAFB	94	38.286	Gorilla_gorilla
ENSFHEG00000004219	safb	100	67.128	ENSHBUG00000009218	safb	100	65.113	Haplochromis_burtoni
ENSFHEG00000004219	safb	64	36.424	ENSHGLG00000015883	SAFB	68	57.265	Heterocephalus_glaber_female
ENSFHEG00000004219	safb	93	61.235	ENSHCOG00000001705	safb	99	60.841	Hippocampus_comes
ENSFHEG00000004219	safb	100	56.671	ENSIPUG00000024869	safb2	99	58.173	Ictalurus_punctatus
ENSFHEG00000004219	safb	100	73.801	ENSKMAG00000022308	safb	100	73.366	Kryptolebias_marmoratus
ENSFHEG00000004219	safb	100	66.943	ENSLBEG00000006015	safb	100	66.232	Labrus_bergylta
ENSFHEG00000004219	safb	64	41.766	ENSLACG00000018090	SAFB	97	46.425	Latimeria_chalumnae
ENSFHEG00000004219	safb	98	55.986	ENSLOCG00000003613	safb	81	66.949	Lepisosteus_oculatus
ENSFHEG00000004219	safb	94	40.111	ENSLAFG00000003840	SAFB	71	58.120	Loxodonta_africana
ENSFHEG00000004219	safb	94	41.756	ENSMFAG00000003885	SAFB	94	37.841	Macaca_fascicularis
ENSFHEG00000004219	safb	94	41.756	ENSMMUG00000017970	SAFB	94	37.915	Macaca_mulatta
ENSFHEG00000004219	safb	66	40.801	ENSMNEG00000035637	SAFB	93	38.235	Macaca_nemestrina
ENSFHEG00000004219	safb	60	40.109	ENSMLEG00000038637	SAFB	61	68.657	Mandrillus_leucophaeus
ENSFHEG00000004219	safb	100	67.784	ENSMAMG00000003357	safb	91	66.707	Mastacembelus_armatus
ENSFHEG00000004219	safb	100	70.802	ENSMZEG00005009120	safb	100	71.053	Maylandia_zebra
ENSFHEG00000004219	safb	52	55.970	ENSMGAG00000001051	-	77	60.000	Meleagris_gallopavo
ENSFHEG00000004219	safb	64	37.793	ENSMGAG00000001101	-	79	47.791	Meleagris_gallopavo
ENSFHEG00000004219	safb	66	42.086	ENSMICG00000008739	-	75	58.120	Microcebus_murinus
ENSFHEG00000004219	safb	51	45.070	ENSMICG00000046795	-	70	66.667	Microcebus_murinus
ENSFHEG00000004219	safb	94	40.670	ENSMODG00000001236	SAFB	74	55.372	Monodelphis_domestica
ENSFHEG00000004219	safb	100	67.217	ENSMALG00000020330	safb	100	66.038	Monopterus_albus
ENSFHEG00000004219	safb	51	56.410	ENSNGAG00000019882	Safb	73	58.036	Nannospalax_galili
ENSFHEG00000004219	safb	93	41.966	ENSNLEG00000013551	SAFB	97	38.538	Nomascus_leucogenys
ENSFHEG00000004219	safb	100	68.057	ENSONIG00000002318	safb	100	67.461	Oreochromis_niloticus
ENSFHEG00000004219	safb	82	37.379	ENSOCUG00000014628	SAFB	64	39.194	Oryctolagus_cuniculus
ENSFHEG00000004219	safb	98	67.500	ENSORLG00000016989	safb	100	67.399	Oryzias_latipes
ENSFHEG00000004219	safb	98	64.194	ENSORLG00020000404	safb	100	62.797	Oryzias_latipes_hni
ENSFHEG00000004219	safb	98	67.875	ENSORLG00015010733	safb	100	67.809	Oryzias_latipes_hsok
ENSFHEG00000004219	safb	100	68.635	ENSOMEG00000009066	safb	100	67.897	Oryzias_melastigma
ENSFHEG00000004219	safb	64	40.306	ENSOGAG00000027769	SAFB	69	57.265	Otolemur_garnettii
ENSFHEG00000004219	safb	94	41.756	ENSPPAG00000035129	SAFB	94	37.727	Pan_paniscus
ENSFHEG00000004219	safb	94	41.756	ENSPTRG00000010335	SAFB	94	37.727	Pan_troglodytes
ENSFHEG00000004219	safb	94	41.597	ENSPANG00000007770	SAFB	94	37.841	Papio_anubis
ENSFHEG00000004219	safb	99	55.606	ENSPKIG00000009902	safb	99	55.899	Paramormyrops_kingsleyae
ENSFHEG00000004219	safb	99	42.950	ENSPSIG00000009367	-	64	47.273	Pelodiscus_sinensis
ENSFHEG00000004219	safb	98	42.950	ENSPSIG00000011679	-	79	53.488	Pelodiscus_sinensis
ENSFHEG00000004219	safb	100	87.664	ENSPFOG00000007745	safb	100	87.664	Poecilia_formosa
ENSFHEG00000004219	safb	100	83.709	ENSPLAG00000001614	safb	100	82.581	Poecilia_latipinna
ENSFHEG00000004219	safb	100	87.402	ENSPMEG00000021023	safb	100	87.402	Poecilia_mexicana
ENSFHEG00000004219	safb	100	85.825	ENSPREG00000012496	safb	100	85.825	Poecilia_reticulata
ENSFHEG00000004219	safb	66	40.426	ENSPPYG00000009428	SAFB	94	37.585	Pongo_abelii
ENSFHEG00000004219	safb	64	36.975	ENSPCAG00000006475	SAFB	61	58.120	Procavia_capensis
ENSFHEG00000004219	safb	94	38.308	ENSPCOG00000014090	SAFB	93	36.930	Propithecus_coquereli
ENSFHEG00000004219	safb	74	57.407	ENSPVAG00000004913	SAFB	69	57.407	Pteropus_vampyrus
ENSFHEG00000004219	safb	99	57.583	ENSPNAG00000021838	safb	66	67.140	Pygocentrus_nattereri
ENSFHEG00000004219	safb	94	40.550	ENSRBIG00000042509	SAFB	61	67.164	Rhinopithecus_bieti
ENSFHEG00000004219	safb	94	41.637	ENSRROG00000029278	SAFB	94	37.727	Rhinopithecus_roxellana
ENSFHEG00000004219	safb	94	42.212	ENSSBOG00000026291	SAFB	93	38.698	Saimiri_boliviensis_boliviensis
ENSFHEG00000004219	safb	99	57.572	ENSSFOG00015008156	safb	99	57.010	Scleropages_formosus
ENSFHEG00000004219	safb	100	68.817	ENSSMAG00000009316	safb	100	67.981	Scophthalmus_maximus
ENSFHEG00000004219	safb	100	69.395	ENSSDUG00000009652	safb	100	67.506	Seriola_dumerili
ENSFHEG00000004219	safb	100	68.554	ENSSLDG00000001670	safb	100	67.148	Seriola_lalandi_dorsalis
ENSFHEG00000004219	safb	53	40.919	ENSSPUG00000009747	-	99	37.345	Sphenodon_punctatus
ENSFHEG00000004219	safb	98	67.430	ENSSPAG00000015682	safb	99	66.582	Stegastes_partitus
ENSFHEG00000004219	safb	78	55.906	ENSSSCG00000013522	SAFB	69	57.265	Sus_scrofa
ENSFHEG00000004219	safb	100	68.826	ENSTRUG00000003567	safb	100	66.585	Takifugu_rubripes
ENSFHEG00000004219	safb	80	70.930	ENSTNIG00000015470	safb	86	70.930	Tetraodon_nigroviridis
ENSFHEG00000004219	safb	90	75.000	ENSTTRG00000013588	SAFB	62	75.000	Tursiops_truncatus
ENSFHEG00000004219	safb	58	52.448	ENSUMAG00000009734	SAFB	72	58.140	Ursus_maritimus
ENSFHEG00000004219	safb	61	50.737	ENSVPAG00000012043	SAFB	59	50.649	Vicugna_pacos
ENSFHEG00000004219	safb	65	41.047	ENSXETG00000008755	safb	87	54.167	Xenopus_tropicalis
ENSFHEG00000004219	safb	100	88.058	ENSXMAG00000003458	safb	100	88.058	Xiphophorus_maculatus