EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSFHEG00000004319 (Gene tree)
Gene ID: 105932246
Gene Symbol: rab12
Alias: zgc:111945
Full Name: RAB12%2C member RAS oncogene family
Gene Type: protein_coding
Species: Fundulus_heteroclitus
Status: putative
Strand: Plus strand
Length: 16226 bases
Position: chrKN811385.1:547273-563498
Accession: 105932246
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSFHEP00000023352	MMR_HSR1	PF01926.23	5.7e-07	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSFHET00000010547	-	2941	XM_012871307	ENSFHEP00000023352	245 (aa)	XP_012726761	UPI0006448D91

Gene Model

Click here to download ENSFHEG00000004319's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSFHEG00000004319's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSFHEG00000004319	rab12	80	37.755	ENSFHEG00000000695	-	80	40.462
ENSFHEG00000004319	rab12	65	31.034	ENSFHEG00000016467	rasl10a	87	30.000
ENSFHEG00000004319	rab12	64	36.646	ENSFHEG00000002502	si:dkey-13a21.4	79	35.976
ENSFHEG00000004319	rab12	73	40.984	ENSFHEG00000011483	zgc:101559	77	40.984
ENSFHEG00000004319	rab12	83	38.967	ENSFHEG00000019668	rab11a	95	38.967
ENSFHEG00000004319	rab12	69	40.828	ENSFHEG00000010509	rab4a	79	40.828
ENSFHEG00000004319	rab12	64	39.506	ENSFHEG00000006551	rab36	59	39.264
ENSFHEG00000004319	rab12	67	35.119	ENSFHEG00000021111	rab9a	83	35.119
ENSFHEG00000004319	rab12	65	38.994	ENSFHEG00000015996	RAB41	73	39.744
ENSFHEG00000004319	rab12	64	34.161	ENSFHEG00000015993	RAB29	78	34.161
ENSFHEG00000004319	rab12	69	41.860	ENSFHEG00000013106	rab42a	78	41.860
ENSFHEG00000004319	rab12	83	38.426	ENSFHEG00000022642	rab11ba	75	43.030
ENSFHEG00000004319	rab12	70	47.674	ENSFHEG00000013918	rab30	84	47.674
ENSFHEG00000004319	rab12	77	46.561	ENSFHEG00000014414	-	83	50.296
ENSFHEG00000004319	rab12	83	39.130	ENSFHEG00000003018	rab25b	84	41.573
ENSFHEG00000004319	rab12	80	39.234	ENSFHEG00000006820	rab33ba	78	39.683
ENSFHEG00000004319	rab12	83	38.426	ENSFHEG00000018353	rab11bb	75	43.636
ENSFHEG00000004319	rab12	68	42.857	ENSFHEG00000002885	-	78	42.857
ENSFHEG00000004319	rab12	65	35.220	ENSFHEG00000012702	rab22a	81	35.220
ENSFHEG00000004319	rab12	70	37.791	ENSFHEG00000012117	rab5c	76	37.791
ENSFHEG00000004319	rab12	76	37.895	ENSFHEG00000005588	RAB7A	75	37.059
ENSFHEG00000004319	rab12	67	34.524	ENSFHEG00000009417	rab9b	76	34.524
ENSFHEG00000004319	rab12	73	37.430	ENSFHEG00000018450	RAB14	82	37.870
ENSFHEG00000004319	rab12	65	36.585	ENSFHEG00000013691	rab34a	63	36.585
ENSFHEG00000004319	rab12	70	46.512	ENSFHEG00000022176	zgc:171927	80	46.512
ENSFHEG00000004319	rab12	76	35.052	ENSFHEG00000018764	RAB9A	78	36.905
ENSFHEG00000004319	rab12	68	32.934	ENSFHEG00000003799	rheb	89	32.934
ENSFHEG00000004319	rab12	67	48.780	ENSFHEG00000020035	rab18b	79	48.780
ENSFHEG00000004319	rab12	70	51.744	ENSFHEG00000021221	rab13	93	51.744
ENSFHEG00000004319	rab12	64	36.478	ENSFHEG00000004532	rab34b	63	36.250
ENSFHEG00000004319	rab12	84	39.614	ENSFHEG00000004891	rab35b	98	45.000
ENSFHEG00000004319	rab12	69	49.704	ENSFHEG00000022985	rab1ab	83	49.704
ENSFHEG00000004319	rab12	63	36.478	ENSFHEG00000023069	rab23	74	34.444
ENSFHEG00000004319	rab12	83	38.426	ENSFHEG00000022676	-	80	43.137
ENSFHEG00000004319	rab12	83	38.835	ENSFHEG00000014186	rab25a	95	38.835
ENSFHEG00000004319	rab12	76	37.895	ENSFHEG00000007101	RAB7A	81	37.278
ENSFHEG00000004319	rab12	93	35.043	ENSFHEG00000022141	rab33a	68	41.718
ENSFHEG00000004319	rab12	63	31.210	ENSFHEG00000004875	si:ch73-116o1.2	80	31.548
ENSFHEG00000004319	rab12	67	33.129	ENSFHEG00000015015	rabl2	60	33.129
ENSFHEG00000004319	rab12	67	48.780	ENSFHEG00000019455	rab18a	79	48.780
ENSFHEG00000004319	rab12	80	40.816	ENSFHEG00000001296	rab2a	79	44.643
ENSFHEG00000004319	rab12	68	45.181	ENSFHEG00000014087	RAB15	85	42.458
ENSFHEG00000004319	rab12	67	43.030	ENSFHEG00000000832	rab11al	78	43.030
ENSFHEG00000004319	rab12	70	38.372	ENSFHEG00000015268	-	76	38.372
ENSFHEG00000004319	rab12	64	40.373	ENSFHEG00000012041	si:dkey-34d22.5	72	40.373
ENSFHEG00000004319	rab12	70	38.953	ENSFHEG00000014070	rab5aa	81	37.989
ENSFHEG00000004319	rab12	84	40.758	ENSFHEG00000009378	rab15	80	46.199
ENSFHEG00000004319	rab12	69	48.521	ENSFHEG00000014924	rab1ba	84	48.521
ENSFHEG00000004319	rab12	61	32.450	ENSFHEG00000009108	kras	85	32.716
ENSFHEG00000004319	rab12	67	41.916	ENSFHEG00000020877	RAB39B	78	41.916
ENSFHEG00000004319	rab12	64	33.333	ENSFHEG00000008212	rhebl1	85	33.333
ENSFHEG00000004319	rab12	78	38.220	ENSFHEG00000022524	rab6bb	84	38.286
ENSFHEG00000004319	rab12	64	41.667	ENSFHEG00000001477	-	69	38.857

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSFHEG00000004319	rab12	100	77.823	ENSG00000206418	RAB12	90	87.215	Homo_sapiens
ENSFHEG00000004319	rab12	89	77.169	ENSAMEG00000007452	RAB12	94	80.822	Ailuropoda_melanoleuca
ENSFHEG00000004319	rab12	100	96.735	ENSACIG00000020616	rab12	100	96.735	Amphilophus_citrinellus
ENSFHEG00000004319	rab12	100	95.510	ENSAOCG00000002130	rab12	100	95.510	Amphiprion_ocellaris
ENSFHEG00000004319	rab12	100	95.510	ENSAPEG00000013255	rab12	100	95.510	Amphiprion_percula
ENSFHEG00000004319	rab12	100	95.510	ENSATEG00000019683	rab12	100	95.510	Anabas_testudineus
ENSFHEG00000004319	rab12	89	84.475	ENSACAG00000003360	RAB12	85	88.128	Anolis_carolinensis
ENSFHEG00000004319	rab12	100	97.143	ENSACLG00000007696	rab12	100	97.143	Astatotilapia_calliptera
ENSFHEG00000004319	rab12	100	89.431	ENSAMXG00000004882	rab12	100	90.244	Astyanax_mexicanus
ENSFHEG00000004319	rab12	93	81.659	ENSBTAG00000010356	RAB12	90	87.671	Bos_taurus
ENSFHEG00000004319	rab12	93	81.659	ENSCJAG00000015468	RAB12	64	87.215	Callithrix_jacchus
ENSFHEG00000004319	rab12	93	81.223	ENSCAFG00020023721	RAB12	75	87.215	Canis_lupus_dingo
ENSFHEG00000004319	rab12	93	81.659	ENSCHIG00000016103	RAB12	90	87.671	Capra_hircus
ENSFHEG00000004319	rab12	85	86.667	ENSCPOG00000022689	RAB12	100	89.048	Cavia_porcellus
ENSFHEG00000004319	rab12	100	78.226	ENSCCAG00000022862	RAB12	89	87.215	Cebus_capucinus
ENSFHEG00000004319	rab12	90	83.482	ENSCATG00000037784	RAB12	91	87.215	Cercocebus_atys
ENSFHEG00000004319	rab12	93	82.096	ENSCSAG00000017569	RAB12	72	81.855	Chlorocebus_sabaeus
ENSFHEG00000004319	rab12	93	82.533	ENSCPBG00000028375	RAB12	89	88.128	Chrysemys_picta_bellii
ENSFHEG00000004319	rab12	89	83.562	ENSCANG00000031453	RAB12	99	87.215	Colobus_angolensis_palliatus
ENSFHEG00000004319	rab12	93	82.533	ENSCGRG00001006958	Rab12	75	87.215	Cricetulus_griseus_chok1gshd
ENSFHEG00000004319	rab12	100	95.918	ENSCSEG00000016933	rab12	100	95.918	Cynoglossus_semilaevis
ENSFHEG00000004319	rab12	100	97.967	ENSCVAG00000003539	rab12	100	97.967	Cyprinodon_variegatus
ENSFHEG00000004319	rab12	100	87.347	ENSDARG00000089428	rab12	93	94.037	Danio_rerio
ENSFHEG00000004319	rab12	83	87.805	ENSDNOG00000046064	RAB12	50	87.215	Dasypus_novemcinctus
ENSFHEG00000004319	rab12	91	82.819	ENSDORG00000008920	Rab12	96	87.671	Dipodomys_ordii
ENSFHEG00000004319	rab12	74	67.582	ENSEBUG00000006581	rab12	89	67.582	Eptatretus_burgeri
ENSFHEG00000004319	rab12	93	81.223	ENSEASG00005002926	RAB12	75	87.215	Equus_asinus_asinus
ENSFHEG00000004319	rab12	93	81.223	ENSECAG00000007384	RAB12	64	87.215	Equus_caballus
ENSFHEG00000004319	rab12	100	89.796	ENSELUG00000007123	rab12	100	87.347	Esox_lucius
ENSFHEG00000004319	rab12	93	81.223	ENSFCAG00000027710	RAB12	65	87.215	Felis_catus
ENSFHEG00000004319	rab12	86	89.573	ENSGMOG00000012335	rab12	87	87.678	Gadus_morhua
ENSFHEG00000004319	rab12	92	83.333	ENSGALG00000033608	RAB12	88	87.671	Gallus_gallus
ENSFHEG00000004319	rab12	97	84.874	ENSGACG00000016639	rab12	100	89.091	Gasterosteus_aculeatus
ENSFHEG00000004319	rab12	93	82.096	ENSGAGG00000007278	RAB12	89	88.128	Gopherus_agassizii
ENSFHEG00000004319	rab12	100	97.143	ENSHBUG00000008497	rab12	100	97.143	Haplochromis_burtoni
ENSFHEG00000004319	rab12	89	85.520	ENSHGLG00000006189	RAB12	86	88.128	Heterocephalus_glaber_female
ENSFHEG00000004319	rab12	100	90.612	ENSHCOG00000012376	rab12	100	88.980	Hippocampus_comes
ENSFHEG00000004319	rab12	91	91.964	ENSIPUG00000017401	rab12	89	93.119	Ictalurus_punctatus
ENSFHEG00000004319	rab12	93	81.304	ENSSTOG00000025122	RAB12	96	87.671	Ictidomys_tridecemlineatus
ENSFHEG00000004319	rab12	90	83.482	ENSJJAG00000019064	Rab12	96	87.215	Jaculus_jaculus
ENSFHEG00000004319	rab12	100	91.837	ENSKMAG00000020056	rab12	100	89.388	Kryptolebias_marmoratus
ENSFHEG00000004319	rab12	100	94.286	ENSLBEG00000013756	rab12	100	92.653	Labrus_bergylta
ENSFHEG00000004319	rab12	90	86.996	ENSLACG00000010461	RAB12	88	87.215	Latimeria_chalumnae
ENSFHEG00000004319	rab12	100	84.274	ENSLOCG00000002680	rab12	100	86.290	Lepisosteus_oculatus
ENSFHEG00000004319	rab12	100	77.823	ENSMFAG00000043551	RAB12	89	87.215	Macaca_fascicularis
ENSFHEG00000004319	rab12	83	87.805	ENSMNEG00000040853	RAB12	87	87.215	Macaca_nemestrina
ENSFHEG00000004319	rab12	100	96.327	ENSMAMG00000006862	rab12	100	96.327	Mastacembelus_armatus
ENSFHEG00000004319	rab12	100	97.143	ENSMZEG00005024316	rab12	100	97.143	Maylandia_zebra
ENSFHEG00000004319	rab12	82	84.314	ENSMGAG00000009197	RAB12	100	88.235	Meleagris_gallopavo
ENSFHEG00000004319	rab12	93	82.533	ENSMAUG00000008371	Rab12	74	87.215	Mesocricetus_auratus
ENSFHEG00000004319	rab12	90	83.482	ENSMICG00000030661	RAB12	92	87.215	Microcebus_murinus
ENSFHEG00000004319	rab12	89	83.562	ENSMOCG00000000452	Rab12	100	87.215	Microtus_ochrogaster
ENSFHEG00000004319	rab12	85	87.560	ENSMODG00000021452	RAB12	65	87.671	Monodelphis_domestica
ENSFHEG00000004319	rab12	100	92.653	ENSMALG00000015762	rab12	100	91.020	Monopterus_albus
ENSFHEG00000004319	rab12	93	82.969	MGP_CAROLIEiJ_G0021839	Rab12	75	88.128	Mus_caroli
ENSFHEG00000004319	rab12	93	82.969	ENSMUSG00000023460	Rab12	90	88.128	Mus_musculus
ENSFHEG00000004319	rab12	93	82.969	MGP_PahariEiJ_G0020826	Rab12	90	88.128	Mus_pahari
ENSFHEG00000004319	rab12	93	82.969	MGP_SPRETEiJ_G0022750	Rab12	75	88.128	Mus_spretus
ENSFHEG00000004319	rab12	100	77.823	ENSMLUG00000002883	RAB12	90	87.215	Myotis_lucifugus
ENSFHEG00000004319	rab12	90	76.786	ENSNGAG00000019722	-	89	76.712	Nannospalax_galili
ENSFHEG00000004319	rab12	94	80.687	ENSNGAG00000024103	-	94	86.758	Nannospalax_galili
ENSFHEG00000004319	rab12	100	97.143	ENSNBRG00000014428	rab12	100	97.143	Neolamprologus_brichardi
ENSFHEG00000004319	rab12	100	77.823	ENSNLEG00000006939	RAB12	90	87.215	Nomascus_leucogenys
ENSFHEG00000004319	rab12	100	79.032	ENSMEUG00000000493	RAB12	89	87.671	Notamacropus_eugenii
ENSFHEG00000004319	rab12	89	84.932	ENSODEG00000006414	RAB12	100	88.584	Octodon_degus
ENSFHEG00000004319	rab12	100	96.735	ENSONIG00000018469	rab12	100	96.735	Oreochromis_niloticus
ENSFHEG00000004319	rab12	100	96.327	ENSORLG00000003902	rab12	100	96.327	Oryzias_latipes
ENSFHEG00000004319	rab12	100	94.694	ENSORLG00020005131	rab12	100	93.061	Oryzias_latipes_hni
ENSFHEG00000004319	rab12	100	95.918	ENSORLG00015007869	rab12	100	95.918	Oryzias_latipes_hsok
ENSFHEG00000004319	rab12	100	97.143	ENSOMEG00000008191	rab12	100	97.143	Oryzias_melastigma
ENSFHEG00000004319	rab12	85	84.286	ENSOGAG00000028002	RAB12	99	88.095	Otolemur_garnettii
ENSFHEG00000004319	rab12	78	88.482	ENSOARG00000000728	RAB12	88	86.512	Ovis_aries
ENSFHEG00000004319	rab12	84	83.575	ENSPPAG00000009152	RAB12	97	87.864	Pan_paniscus
ENSFHEG00000004319	rab12	100	77.823	ENSPPRG00000024521	RAB12	90	87.215	Panthera_pardus
ENSFHEG00000004319	rab12	100	77.823	ENSPTRG00000009853	RAB12	90	87.215	Pan_troglodytes
ENSFHEG00000004319	rab12	100	78.543	ENSPANG00000009320	RAB12	100	81.781	Papio_anubis
ENSFHEG00000004319	rab12	100	86.992	ENSPKIG00000008579	rab12	100	85.714	Paramormyrops_kingsleyae
ENSFHEG00000004319	rab12	100	89.796	ENSPMGG00000001890	rab12	100	89.388	Periophthalmus_magnuspinnatus
ENSFHEG00000004319	rab12	93	82.969	ENSPEMG00000021032	Rab12	75	87.671	Peromyscus_maniculatus_bairdii
ENSFHEG00000004319	rab12	93	82.533	ENSPCIG00000010453	RAB12	55	87.671	Phascolarctos_cinereus
ENSFHEG00000004319	rab12	100	95.918	ENSPFOG00000001579	rab12	100	95.918	Poecilia_formosa
ENSFHEG00000004319	rab12	100	95.918	ENSPLAG00000013594	rab12	100	95.918	Poecilia_latipinna
ENSFHEG00000004319	rab12	100	95.918	ENSPMEG00000010417	rab12	100	95.918	Poecilia_mexicana
ENSFHEG00000004319	rab12	100	96.327	ENSPREG00000017487	rab12	100	96.327	Poecilia_reticulata
ENSFHEG00000004319	rab12	93	81.223	ENSPPYG00000009015	-	64	87.215	Pongo_abelii
ENSFHEG00000004319	rab12	100	78.226	ENSPCAG00000015007	RAB12	90	87.215	Procavia_capensis
ENSFHEG00000004319	rab12	100	77.823	ENSPCOG00000019816	RAB12	90	87.215	Propithecus_coquereli
ENSFHEG00000004319	rab12	100	77.419	ENSPVAG00000002757	RAB12	90	86.758	Pteropus_vampyrus
ENSFHEG00000004319	rab12	100	97.143	ENSPNYG00000005654	rab12	100	97.143	Pundamilia_nyererei
ENSFHEG00000004319	rab12	100	97.143	ENSPNYG00000023905	rab12	100	97.143	Pundamilia_nyererei
ENSFHEG00000004319	rab12	100	88.211	ENSPNAG00000015031	rab12	100	89.024	Pygocentrus_nattereri
ENSFHEG00000004319	rab12	93	80.870	ENSRNOG00000019295	Rab12	82	86.070	Rattus_norvegicus
ENSFHEG00000004319	rab12	90	83.482	ENSRBIG00000028760	RAB12	94	87.215	Rhinopithecus_bieti
ENSFHEG00000004319	rab12	90	83.482	ENSRROG00000019249	RAB12	92	87.215	Rhinopithecus_roxellana
ENSFHEG00000004319	rab12	93	78.788	ENSSBOG00000021125	RAB12	80	87.560	Saimiri_boliviensis_boliviensis
ENSFHEG00000004319	rab12	93	82.018	ENSSHAG00000001489	RAB12	88	87.940	Sarcophilus_harrisii
ENSFHEG00000004319	rab12	100	94.286	ENSSMAG00000012678	rab12	100	93.469	Scophthalmus_maximus
ENSFHEG00000004319	rab12	100	96.327	ENSSDUG00000008505	rab12	100	96.327	Seriola_dumerili
ENSFHEG00000004319	rab12	100	96.327	ENSSLDG00000022239	rab12	100	96.327	Seriola_lalandi_dorsalis
ENSFHEG00000004319	rab12	83	89.216	ENSSPUG00000003222	RAB12	89	88.584	Sphenodon_punctatus
ENSFHEG00000004319	rab12	100	95.918	ENSSPAG00000010822	rab12	100	95.918	Stegastes_partitus
ENSFHEG00000004319	rab12	100	79.839	ENSSSCG00000038026	RAB12	90	88.128	Sus_scrofa
ENSFHEG00000004319	rab12	93	81.385	ENSTGUG00000009889	RAB12	88	88.128	Taeniopygia_guttata
ENSFHEG00000004319	rab12	100	92.245	ENSTRUG00000024455	rab12	100	89.796	Takifugu_rubripes
ENSFHEG00000004319	rab12	100	92.653	ENSTNIG00000014859	rab12	100	91.020	Tetraodon_nigroviridis
ENSFHEG00000004319	rab12	89	83.562	ENSTTRG00000008711	RAB12	99	87.215	Tursiops_truncatus
ENSFHEG00000004319	rab12	100	77.823	ENSUAMG00000018092	RAB12	90	87.215	Ursus_americanus
ENSFHEG00000004319	rab12	89	83.105	ENSVVUG00000011748	RAB12	99	86.758	Vulpes_vulpes
ENSFHEG00000004319	rab12	96	82.128	ENSXETG00000004289	rab12	71	88.636	Xenopus_tropicalis
ENSFHEG00000004319	rab12	100	93.878	ENSXCOG00000019310	rab12	100	92.653	Xiphophorus_couchianus
ENSFHEG00000004319	rab12	100	94.286	ENSXMAG00000023617	rab12	100	93.061	Xiphophorus_maculatus