EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSFHEG00000004338 (Gene tree)
Gene ID: 105931760
Gene Symbol: larp4aa
Alias: larp4a|si:ch211-156j22.2
Full Name: la-related protein 4
Gene Type: protein_coding
Species: Fundulus_heteroclitus
Status: putative
Strand: Plus strand
Length: 23309 bases
Position: chrKN811376.1:1639754-1663062
Accession: 105931760
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSFHEP00000023381	La	PF05383.17	9.5e-18	1	1
ENSFHEP00000023375	La	PF05383.17	9.6e-18	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSFHET00000010500	-	5497	XM_012870593	ENSFHEP00000023375	810 (aa)	XP_012726047	UPI000645147D
ENSFHET00000010508	-	5455	XM_012870594	ENSFHEP00000023381	796 (aa)	XP_012726048	UPI000644F616

Gene Model

Click here to download ENSFHEG00000004338's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSFHEG00000004338's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSFHEG00000004338	larp4aa	95	44.569	ENSFHEG00000013854	larp4ab	99	45.186
ENSFHEG00000004338	larp4aa	88	33.471	ENSFHEG00000013037	LARP4B	65	67.227

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSFHEG00000004338	larp4aa	87	59.480	ENSG00000161813	LARP4	99	59.480	Homo_sapiens
ENSFHEG00000004338	larp4aa	100	84.700	ENSAPOG00000007142	larp4aa	100	84.578	Acanthochromis_polyacanthus
ENSFHEG00000004338	larp4aa	95	51.658	ENSAPOG00000021331	larp4ab	100	51.018	Acanthochromis_polyacanthus
ENSFHEG00000004338	larp4aa	100	77.640	ENSACIG00000001198	larp4aa	100	79.130	Amphilophus_citrinellus
ENSFHEG00000004338	larp4aa	95	50.759	ENSAOCG00000006387	larp4ab	100	50.190	Amphiprion_ocellaris
ENSFHEG00000004338	larp4aa	100	85.697	ENSAOCG00000002408	larp4aa	100	85.575	Amphiprion_ocellaris
ENSFHEG00000004338	larp4aa	100	85.435	ENSAPEG00000019058	larp4aa	100	85.312	Amphiprion_percula
ENSFHEG00000004338	larp4aa	100	83.706	ENSATEG00000020715	larp4aa	100	83.333	Anabas_testudineus
ENSFHEG00000004338	larp4aa	95	49.427	ENSATEG00000001018	larp4ab	100	49.299	Anabas_testudineus
ENSFHEG00000004338	larp4aa	95	48.285	ENSACAG00000017133	LARP4	96	48.158	Anolis_carolinensis
ENSFHEG00000004338	larp4aa	83	62.803	ENSANAG00000029342	LARP4	99	59.925	Aotus_nancymaae
ENSFHEG00000004338	larp4aa	100	80.877	ENSACLG00000002575	larp4aa	100	81.242	Astatotilapia_calliptera
ENSFHEG00000004338	larp4aa	100	62.871	ENSAMXG00000036493	larp4aa	100	63.046	Astyanax_mexicanus
ENSFHEG00000004338	larp4aa	100	50.903	ENSAMXG00000001515	larp4ab	100	52.174	Astyanax_mexicanus
ENSFHEG00000004338	larp4aa	84	60.769	ENSBTAG00000017164	LARP4	99	47.243	Bos_taurus
ENSFHEG00000004338	larp4aa	83	62.534	ENSCJAG00000021131	LARP4	99	59.551	Callithrix_jacchus
ENSFHEG00000004338	larp4aa	80	62.500	ENSCAFG00020014554	LARP4	99	58.246	Canis_lupus_dingo
ENSFHEG00000004338	larp4aa	95	50.000	ENSTSYG00000004342	LARP4	96	63.298	Carlito_syrichta
ENSFHEG00000004338	larp4aa	94	36.604	ENSCAPG00000012942	LARP4	91	46.866	Cavia_aperea
ENSFHEG00000004338	larp4aa	95	44.788	ENSCPOG00000020519	LARP4	99	45.174	Cavia_porcellus
ENSFHEG00000004338	larp4aa	84	62.264	ENSCCAG00000024439	LARP4	99	59.176	Cebus_capucinus
ENSFHEG00000004338	larp4aa	95	45.780	ENSCATG00000044528	LARP4	99	45.977	Cercocebus_atys
ENSFHEG00000004338	larp4aa	95	47.321	ENSCLAG00000001829	LARP4	99	47.704	Chinchilla_lanigera
ENSFHEG00000004338	larp4aa	95	50.127	ENSCPBG00000019407	LARP4	90	50.254	Chrysemys_picta_bellii
ENSFHEG00000004338	larp4aa	83	55.844	ENSCANG00000033097	-	89	59.816	Colobus_angolensis_palliatus
ENSFHEG00000004338	larp4aa	87	59.925	ENSCANG00000029159	-	99	59.925	Colobus_angolensis_palliatus
ENSFHEG00000004338	larp4aa	95	48.412	ENSCGRG00001010818	Larp4	99	48.420	Cricetulus_griseus_chok1gshd
ENSFHEG00000004338	larp4aa	95	48.412	ENSCGRG00000009382	Larp4	100	48.420	Cricetulus_griseus_crigri
ENSFHEG00000004338	larp4aa	100	80.292	ENSCSEG00000001963	larp4aa	100	80.170	Cynoglossus_semilaevis
ENSFHEG00000004338	larp4aa	89	46.883	ENSCSEG00000003240	larp4ab	95	47.188	Cynoglossus_semilaevis
ENSFHEG00000004338	larp4aa	100	88.725	ENSCVAG00000005488	larp4aa	100	88.603	Cyprinodon_variegatus
ENSFHEG00000004338	larp4aa	95	51.160	ENSDARG00000074979	larp4ab	85	80.667	Danio_rerio
ENSFHEG00000004338	larp4aa	100	61.722	ENSDARG00000078401	larp4aa	100	61.967	Danio_rerio
ENSFHEG00000004338	larp4aa	95	46.768	ENSDNOG00000038525	LARP4	99	47.112	Dasypus_novemcinctus
ENSFHEG00000004338	larp4aa	55	85.185	ENSETEG00000011683	LARP4	54	85.185	Echinops_telfairi
ENSFHEG00000004338	larp4aa	53	56.589	ENSEBUG00000010394	LARP4	85	38.045	Eptatretus_burgeri
ENSFHEG00000004338	larp4aa	54	44.685	ENSEBUG00000004426	LARP4	76	43.202	Eptatretus_burgeri
ENSFHEG00000004338	larp4aa	66	56.780	ENSEASG00005004356	LARP4	100	56.780	Equus_asinus_asinus
ENSFHEG00000004338	larp4aa	70	83.761	ENSEEUG00000000316	LARP4	69	83.761	Erinaceus_europaeus
ENSFHEG00000004338	larp4aa	95	50.834	ENSELUG00000018650	larp4ab	84	78.947	Esox_lucius
ENSFHEG00000004338	larp4aa	100	61.985	ENSELUG00000000395	larp4aa	100	61.205	Esox_lucius
ENSFHEG00000004338	larp4aa	83	62.834	ENSFCAG00000031897	LARP4	96	62.933	Felis_catus
ENSFHEG00000004338	larp4aa	80	50.753	ENSFALG00000002114	LARP4	95	50.751	Ficedula_albicollis
ENSFHEG00000004338	larp4aa	95	48.977	ENSFDAG00000006406	-	99	48.787	Fukomys_damarensis
ENSFHEG00000004338	larp4aa	100	71.606	ENSGMOG00000008246	larp4aa	100	71.446	Gadus_morhua
ENSFHEG00000004338	larp4aa	91	46.065	ENSGALG00000042122	LARP4	92	49.208	Gallus_gallus
ENSFHEG00000004338	larp4aa	95	46.883	ENSGAFG00000021777	larp4ab	99	46.835	Gambusia_affinis
ENSFHEG00000004338	larp4aa	100	77.640	ENSGACG00000008381	larp4aa	98	88.643	Gasterosteus_aculeatus
ENSFHEG00000004338	larp4aa	95	48.982	ENSGACG00000000680	larp4ab	88	63.271	Gasterosteus_aculeatus
ENSFHEG00000004338	larp4aa	95	49.296	ENSGAGG00000006969	LARP4	99	49.424	Gopherus_agassizii
ENSFHEG00000004338	larp4aa	87	59.108	ENSGGOG00000015230	LARP4	94	59.108	Gorilla_gorilla
ENSFHEG00000004338	larp4aa	100	80.633	ENSHBUG00000023074	larp4aa	100	80.999	Haplochromis_burtoni
ENSFHEG00000004338	larp4aa	82	47.964	ENSHGLG00000013875	-	97	47.793	Heterocephalus_glaber_female
ENSFHEG00000004338	larp4aa	95	45.340	ENSHGLG00100011678	-	99	45.501	Heterocephalus_glaber_male
ENSFHEG00000004338	larp4aa	95	47.134	ENSHGLG00100016984	-	99	47.637	Heterocephalus_glaber_male
ENSFHEG00000004338	larp4aa	95	46.803	ENSHCOG00000020857	larp4ab	100	46.369	Hippocampus_comes
ENSFHEG00000004338	larp4aa	100	73.227	ENSHCOG00000015951	larp4aa	100	73.626	Hippocampus_comes
ENSFHEG00000004338	larp4aa	100	60.479	ENSIPUG00000007514	larp4aa	100	60.693	Ictalurus_punctatus
ENSFHEG00000004338	larp4aa	95	48.062	ENSIPUG00000021659	larp4ab	99	48.187	Ictalurus_punctatus
ENSFHEG00000004338	larp4aa	100	83.784	ENSKMAG00000006800	larp4aa	100	83.170	Kryptolebias_marmoratus
ENSFHEG00000004338	larp4aa	95	48.659	ENSKMAG00000018556	larp4ab	100	47.601	Kryptolebias_marmoratus
ENSFHEG00000004338	larp4aa	95	48.520	ENSLBEG00000019306	larp4ab	100	49.166	Labrus_bergylta
ENSFHEG00000004338	larp4aa	97	82.506	ENSLBEG00000014537	larp4aa	100	81.473	Labrus_bergylta
ENSFHEG00000004338	larp4aa	99	48.681	ENSLACG00000019090	LARP4	99	48.881	Latimeria_chalumnae
ENSFHEG00000004338	larp4aa	100	58.182	ENSLOCG00000007113	larp4ab	100	57.990	Lepisosteus_oculatus
ENSFHEG00000004338	larp4aa	82	46.508	ENSLAFG00000005160	LARP4	100	46.445	Loxodonta_africana
ENSFHEG00000004338	larp4aa	83	62.803	ENSMFAG00000043681	LARP4	99	59.925	Macaca_fascicularis
ENSFHEG00000004338	larp4aa	83	62.803	ENSMMUG00000008172	LARP4	99	59.925	Macaca_mulatta
ENSFHEG00000004338	larp4aa	83	46.445	ENSMNEG00000037799	-	83	84.000	Macaca_nemestrina
ENSFHEG00000004338	larp4aa	74	70.000	ENSMNEG00000034602	LARP4	98	47.961	Macaca_nemestrina
ENSFHEG00000004338	larp4aa	87	59.925	ENSMLEG00000039661	LARP4	99	59.925	Mandrillus_leucophaeus
ENSFHEG00000004338	larp4aa	100	84.390	ENSMAMG00000011206	larp4aa	100	83.780	Mastacembelus_armatus
ENSFHEG00000004338	larp4aa	95	50.255	ENSMAMG00000002616	larp4ab	100	50.377	Mastacembelus_armatus
ENSFHEG00000004338	larp4aa	100	81.121	ENSMZEG00005001813	larp4aa	100	81.364	Maylandia_zebra
ENSFHEG00000004338	larp4aa	81	64.387	ENSMICG00000030156	-	89	61.616	Microcebus_murinus
ENSFHEG00000004338	larp4aa	70	77.308	ENSMICG00000012388	-	97	83.333	Microcebus_murinus
ENSFHEG00000004338	larp4aa	95	45.254	ENSMMOG00000021861	larp4ab	92	58.739	Mola_mola
ENSFHEG00000004338	larp4aa	100	77.301	ENSMMOG00000004785	larp4aa	100	76.810	Mola_mola
ENSFHEG00000004338	larp4aa	71	63.522	MGP_CAROLIEiJ_G0020281	Larp4	82	63.407	Mus_caroli
ENSFHEG00000004338	larp4aa	100	80.268	ENSNBRG00000011292	larp4aa	100	80.999	Neolamprologus_brichardi
ENSFHEG00000004338	larp4aa	87	60.674	ENSNLEG00000017798	LARP4	99	60.674	Nomascus_leucogenys
ENSFHEG00000004338	larp4aa	95	47.201	ENSODEG00000009770	LARP4	100	47.583	Octodon_degus
ENSFHEG00000004338	larp4aa	100	80.793	ENSONIG00000011895	larp4aa	100	81.165	Oreochromis_niloticus
ENSFHEG00000004338	larp4aa	95	46.667	ENSONIG00000019124	larp4ab	99	46.415	Oreochromis_niloticus
ENSFHEG00000004338	larp4aa	66	53.584	ENSOANG00000004373	LARP4	97	53.584	Ornithorhynchus_anatinus
ENSFHEG00000004338	larp4aa	95	47.607	ENSOCUG00000021417	-	99	46.809	Oryctolagus_cuniculus
ENSFHEG00000004338	larp4aa	95	48.050	ENSOCUG00000026872	-	99	48.055	Oryctolagus_cuniculus
ENSFHEG00000004338	larp4aa	100	76.989	ENSORLG00000006758	larp4aa	100	76.622	Oryzias_latipes
ENSFHEG00000004338	larp4aa	100	76.622	ENSORLG00020010258	larp4aa	100	76.622	Oryzias_latipes_hni
ENSFHEG00000004338	larp4aa	100	76.132	ENSORLG00015002292	larp4aa	100	76.132	Oryzias_latipes_hsok
ENSFHEG00000004338	larp4aa	100	74.384	ENSOMEG00000019749	larp4aa	96	86.932	Oryzias_melastigma
ENSFHEG00000004338	larp4aa	70	62.500	ENSPPAG00000035100	LARP4	86	62.567	Pan_paniscus
ENSFHEG00000004338	larp4aa	83	62.834	ENSPPRG00000004522	LARP4	96	62.933	Panthera_pardus
ENSFHEG00000004338	larp4aa	83	62.834	ENSPTIG00000015617	LARP4	96	62.933	Panthera_tigris_altaica
ENSFHEG00000004338	larp4aa	83	62.198	ENSPTRG00000004935	LARP4	99	59.480	Pan_troglodytes
ENSFHEG00000004338	larp4aa	87	60.674	ENSPANG00000022964	LARP4	99	60.674	Papio_anubis
ENSFHEG00000004338	larp4aa	100	58.145	ENSPKIG00000005950	larp4ab	100	57.976	Paramormyrops_kingsleyae
ENSFHEG00000004338	larp4aa	52	59.274	ENSPMAG00000002788	LARP4	97	41.741	Petromyzon_marinus
ENSFHEG00000004338	larp4aa	96	48.995	ENSPCIG00000000384	LARP4	100	48.246	Phascolarctos_cinereus
ENSFHEG00000004338	larp4aa	100	88.533	ENSPFOG00000013148	larp4aa	100	88.779	Poecilia_formosa
ENSFHEG00000004338	larp4aa	95	46.776	ENSPFOG00000009764	larp4ab	99	45.823	Poecilia_formosa
ENSFHEG00000004338	larp4aa	100	88.582	ENSPLAG00000013626	larp4aa	100	88.833	Poecilia_latipinna
ENSFHEG00000004338	larp4aa	95	46.918	ENSPLAG00000008502	larp4ab	99	46.203	Poecilia_latipinna
ENSFHEG00000004338	larp4aa	100	88.779	ENSPMEG00000014271	larp4aa	100	88.533	Poecilia_mexicana
ENSFHEG00000004338	larp4aa	95	46.633	ENSPMEG00000002720	larp4ab	99	46.008	Poecilia_mexicana
ENSFHEG00000004338	larp4aa	100	88.582	ENSPREG00000022597	larp4aa	100	88.833	Poecilia_reticulata
ENSFHEG00000004338	larp4aa	63	55.067	ENSPPYG00000004512	-	98	54.981	Pongo_abelii
ENSFHEG00000004338	larp4aa	77	66.551	ENSPCAG00000003671	LARP4	79	66.551	Procavia_capensis
ENSFHEG00000004338	larp4aa	83	62.466	ENSPCOG00000026291	LARP4	96	62.567	Propithecus_coquereli
ENSFHEG00000004338	larp4aa	100	80.877	ENSPNYG00000022265	larp4aa	100	81.242	Pundamilia_nyererei
ENSFHEG00000004338	larp4aa	97	61.928	ENSPNAG00000024770	larp4aa	99	61.946	Pygocentrus_nattereri
ENSFHEG00000004338	larp4aa	96	52.718	ENSPNAG00000014478	larp4ab	99	53.934	Pygocentrus_nattereri
ENSFHEG00000004338	larp4aa	80	54.580	ENSRBIG00000038857	-	89	65.217	Rhinopithecus_bieti
ENSFHEG00000004338	larp4aa	69	55.242	ENSRBIG00000036890	-	99	55.242	Rhinopithecus_bieti
ENSFHEG00000004338	larp4aa	87	59.925	ENSRROG00000042764	-	99	59.925	Rhinopithecus_roxellana
ENSFHEG00000004338	larp4aa	69	55.242	ENSRROG00000025487	-	99	55.242	Rhinopithecus_roxellana
ENSFHEG00000004338	larp4aa	83	61.725	ENSSBOG00000026650	LARP4	96	61.828	Saimiri_boliviensis_boliviensis
ENSFHEG00000004338	larp4aa	100	58.675	ENSSFOG00015014096	larp4ab	100	59.036	Scleropages_formosus
ENSFHEG00000004338	larp4aa	99	59.324	ENSSFOG00015003868	larp4aa	99	60.202	Scleropages_formosus
ENSFHEG00000004338	larp4aa	100	82.540	ENSSMAG00000019473	larp4aa	100	83.028	Scophthalmus_maximus
ENSFHEG00000004338	larp4aa	95	49.071	ENSSMAG00000002838	larp4ab	100	50.000	Scophthalmus_maximus
ENSFHEG00000004338	larp4aa	95	51.198	ENSSDUG00000006655	larp4ab	100	51.389	Seriola_dumerili
ENSFHEG00000004338	larp4aa	100	83.922	ENSSDUG00000010621	larp4aa	100	84.166	Seriola_dumerili
ENSFHEG00000004338	larp4aa	100	83.557	ENSSLDG00000004942	larp4aa	100	83.678	Seriola_lalandi_dorsalis
ENSFHEG00000004338	larp4aa	95	50.822	ENSSLDG00000001791	larp4ab	100	51.013	Seriola_lalandi_dorsalis
ENSFHEG00000004338	larp4aa	81	54.444	ENSSARG00000012469	LARP4	90	52.491	Sorex_araneus
ENSFHEG00000004338	larp4aa	90	47.613	ENSSPUG00000016552	LARP4	92	48.133	Sphenodon_punctatus
ENSFHEG00000004338	larp4aa	95	51.646	ENSSPAG00000002172	larp4ab	100	50.697	Stegastes_partitus
ENSFHEG00000004338	larp4aa	85	90.370	ENSSPAG00000007222	larp4aa	93	89.946	Stegastes_partitus
ENSFHEG00000004338	larp4aa	57	66.154	ENSSSCG00000028516	LARP4	87	54.762	Sus_scrofa
ENSFHEG00000004338	larp4aa	95	47.375	ENSTGUG00000003479	LARP4	52	64.921	Taeniopygia_guttata
ENSFHEG00000004338	larp4aa	95	46.348	ENSTRUG00000007206	larp4ab	100	45.214	Takifugu_rubripes
ENSFHEG00000004338	larp4aa	95	74.219	ENSTNIG00000015109	larp4aa	99	73.127	Tetraodon_nigroviridis
ENSFHEG00000004338	larp4aa	95	46.617	ENSTNIG00000014571	larp4ab	100	46.135	Tetraodon_nigroviridis
ENSFHEG00000004338	larp4aa	80	52.450	ENSTBEG00000005167	LARP4	82	52.450	Tupaia_belangeri
ENSFHEG00000004338	larp4aa	95	46.379	ENSTTRG00000003764	LARP4	99	46.709	Tursiops_truncatus
ENSFHEG00000004338	larp4aa	95	46.310	ENSVVUG00000024717	LARP4	99	58.246	Vulpes_vulpes
ENSFHEG00000004338	larp4aa	87	50.348	ENSXETG00000007283	larp4	95	49.167	Xenopus_tropicalis
ENSFHEG00000004338	larp4aa	100	82.861	ENSXCOG00000006387	larp4aa	100	83.107	Xiphophorus_couchianus
ENSFHEG00000004338	larp4aa	95	47.302	ENSXMAG00000002156	larp4ab	99	47.577	Xiphophorus_maculatus
ENSFHEG00000004338	larp4aa	100	88.286	ENSXMAG00000010519	larp4aa	100	88.533	Xiphophorus_maculatus