EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSFHEG00000004532 (Gene tree)
Gene ID: 105917879
Gene Symbol: rab34b
Alias: si:dkey-220h13.7
Full Name: ras-related protein Rab-34-like
Gene Type: protein_coding
Species: Fundulus_heteroclitus
Status: putative
Strand: Minus strand
Length: 8514 bases
Position: chrKN805802.1:274100-282613
Accession: 105917879
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSFHEP00000003649	MMR_HSR1	PF01926.23	5.6e-06	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSFHET00000010185	-	1851	XM_012852816	ENSFHEP00000003649	254 (aa)	XP_012708270	UPI000644998D

Gene Model

Click here to download ENSFHEG00000004532's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSFHEG00000004532's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSFHEG00000004532	rab34b	53	30.216	ENSFHEG00000013017	-	70	30.216
ENSFHEG00000004532	rab34b	80	33.005	ENSFHEG00000014070	rab5aa	89	33.005
ENSFHEG00000004532	rab34b	64	38.272	ENSFHEG00000014087	RAB15	78	37.126
ENSFHEG00000004532	rab34b	64	37.349	ENSFHEG00000022141	rab33a	69	37.349
ENSFHEG00000004532	rab34b	80	35.122	ENSFHEG00000004891	rab35b	96	35.122
ENSFHEG00000004532	rab34b	66	37.126	ENSFHEG00000000695	-	76	37.126
ENSFHEG00000004532	rab34b	80	30.583	ENSFHEG00000010509	rab4a	95	30.583
ENSFHEG00000004532	rab34b	63	36.025	ENSFHEG00000014924	rab1ba	79	36.025
ENSFHEG00000004532	rab34b	52	39.098	ENSFHEG00000014186	rab25a	59	40.000
ENSFHEG00000004532	rab34b	80	33.019	ENSFHEG00000012041	si:dkey-34d22.5	95	33.019
ENSFHEG00000004532	rab34b	65	38.182	ENSFHEG00000002885	-	77	38.182
ENSFHEG00000004532	rab34b	64	38.857	ENSFHEG00000006820	rab33ba	72	38.857
ENSFHEG00000004532	rab34b	71	35.326	ENSFHEG00000002502	si:dkey-13a21.4	86	34.637
ENSFHEG00000004532	rab34b	63	36.646	ENSFHEG00000022985	rab1ab	78	36.646
ENSFHEG00000004532	rab34b	80	30.049	ENSFHEG00000015268	-	88	30.049
ENSFHEG00000004532	rab34b	71	32.065	ENSFHEG00000005588	RAB7A	77	32.065
ENSFHEG00000004532	rab34b	80	31.401	ENSFHEG00000003018	rab25b	93	31.401
ENSFHEG00000004532	rab34b	63	31.250	ENSFHEG00000012702	rab22a	81	31.250
ENSFHEG00000004532	rab34b	60	35.065	ENSFHEG00000019455	rab18a	75	35.032
ENSFHEG00000004532	rab34b	73	37.634	ENSFHEG00000015996	RAB41	84	37.634
ENSFHEG00000004532	rab34b	52	35.766	ENSFHEG00000015993	RAB29	66	35.766
ENSFHEG00000004532	rab34b	65	35.152	ENSFHEG00000001296	rab2a	76	35.152
ENSFHEG00000004532	rab34b	70	32.022	ENSFHEG00000020035	rab18b	85	32.022
ENSFHEG00000004532	rab34b	65	37.952	ENSFHEG00000020877	RAB39B	77	37.952
ENSFHEG00000004532	rab34b	59	38.255	ENSFHEG00000023069	rab23	66	40.000
ENSFHEG00000004532	rab34b	66	36.527	ENSFHEG00000009378	rab15	77	36.527
ENSFHEG00000004532	rab34b	63	40.373	ENSFHEG00000001477	-	62	40.373
ENSFHEG00000004532	rab34b	68	34.682	ENSFHEG00000013106	rab42a	78	34.682
ENSFHEG00000004532	rab34b	100	64.453	ENSFHEG00000013691	rab34a	99	64.453
ENSFHEG00000004532	rab34b	78	35.859	ENSFHEG00000021221	rab13	94	35.859
ENSFHEG00000004532	rab34b	61	32.704	ENSFHEG00000018764	RAB9A	73	32.704
ENSFHEG00000004532	rab34b	68	32.000	ENSFHEG00000007101	RAB7A	84	32.000
ENSFHEG00000004532	rab34b	88	54.867	ENSFHEG00000006551	rab36	84	54.867
ENSFHEG00000004532	rab34b	63	33.750	ENSFHEG00000012117	rab5c	71	33.750
ENSFHEG00000004532	rab34b	63	37.267	ENSFHEG00000014414	-	78	37.267
ENSFHEG00000004532	rab34b	63	40.491	ENSFHEG00000022524	rab6bb	76	40.491
ENSFHEG00000004532	rab34b	63	39.506	ENSFHEG00000022176	zgc:171927	74	39.506
ENSFHEG00000004532	rab34b	63	40.625	ENSFHEG00000013918	rab30	77	40.625
ENSFHEG00000004532	rab34b	63	36.250	ENSFHEG00000004319	rab12	64	36.478

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSFHEG00000004532	rab34b	85	88.372	ENSAPOG00000019147	rab34b	95	77.500	Acanthochromis_polyacanthus
ENSFHEG00000004532	rab34b	100	74.803	ENSACIG00000004859	rab34b	99	74.803	Amphilophus_citrinellus
ENSFHEG00000004532	rab34b	100	82.812	ENSAOCG00000007106	rab34b	93	82.812	Amphiprion_ocellaris
ENSFHEG00000004532	rab34b	88	87.500	ENSAPEG00000018607	rab34b	86	83.402	Amphiprion_percula
ENSFHEG00000004532	rab34b	94	81.667	ENSATEG00000006851	rab34b	94	81.667	Anabas_testudineus
ENSFHEG00000004532	rab34b	100	86.220	ENSACLG00000005733	rab34b	96	86.220	Astatotilapia_calliptera
ENSFHEG00000004532	rab34b	99	71.542	ENSAMXG00000006018	rab34b	98	71.542	Astyanax_mexicanus
ENSFHEG00000004532	rab34b	93	80.932	ENSCSEG00000018133	rab34b	94	80.932	Cynoglossus_semilaevis
ENSFHEG00000004532	rab34b	99	72.727	ENSDARG00000010977	rab34b	98	72.727	Danio_rerio
ENSFHEG00000004532	rab34b	100	81.569	ENSELUG00000005597	rab34b	99	81.569	Esox_lucius
ENSFHEG00000004532	rab34b	81	79.327	ENSGMOG00000007140	rab34b	100	79.327	Gadus_morhua
ENSFHEG00000004532	rab34b	100	84.706	ENSGACG00000020514	rab34b	99	84.706	Gasterosteus_aculeatus
ENSFHEG00000004532	rab34b	99	69.565	ENSIPUG00000024531	rab34	98	69.565	Ictalurus_punctatus
ENSFHEG00000004532	rab34b	100	88.189	ENSKMAG00000019341	rab34b	100	88.189	Kryptolebias_marmoratus
ENSFHEG00000004532	rab34b	100	83.858	ENSLBEG00000027819	rab34b	94	90.426	Labrus_bergylta
ENSFHEG00000004532	rab34b	100	84.706	ENSMAMG00000020214	rab34b	100	84.706	Mastacembelus_armatus
ENSFHEG00000004532	rab34b	100	80.315	ENSMMOG00000010936	rab34b	86	80.315	Mola_mola
ENSFHEG00000004532	rab34b	93	84.746	ENSMALG00000018499	rab34b	88	84.746	Monopterus_albus
ENSFHEG00000004532	rab34b	100	86.220	ENSONIG00000005519	rab34b	100	86.220	Oreochromis_niloticus
ENSFHEG00000004532	rab34b	100	83.858	ENSORLG00000003119	rab34b	92	83.858	Oryzias_latipes
ENSFHEG00000004532	rab34b	100	84.646	ENSORLG00020016139	rab34b	92	84.646	Oryzias_latipes_hni
ENSFHEG00000004532	rab34b	100	83.858	ENSORLG00015000584	rab34b	92	83.858	Oryzias_latipes_hsok
ENSFHEG00000004532	rab34b	100	85.433	ENSOMEG00000010334	rab34b	98	84.362	Oryzias_melastigma
ENSFHEG00000004532	rab34b	99	71.260	ENSPKIG00000013326	rab34b	98	71.260	Paramormyrops_kingsleyae
ENSFHEG00000004532	rab34b	100	81.890	ENSPMGG00000021697	rab34b	99	81.890	Periophthalmus_magnuspinnatus
ENSFHEG00000004532	rab34b	100	92.520	ENSPFOG00000011444	rab34b	99	92.520	Poecilia_formosa
ENSFHEG00000004532	rab34b	100	92.520	ENSPLAG00000005074	rab34b	100	92.520	Poecilia_latipinna
ENSFHEG00000004532	rab34b	100	92.520	ENSPMEG00000013297	rab34b	100	92.520	Poecilia_mexicana
ENSFHEG00000004532	rab34b	100	92.520	ENSPREG00000009813	rab34b	100	92.520	Poecilia_reticulata
ENSFHEG00000004532	rab34b	100	74.803	ENSPNYG00000017153	rab34b	99	89.831	Pundamilia_nyererei
ENSFHEG00000004532	rab34b	93	73.418	ENSPNAG00000015040	rab34b	99	73.418	Pygocentrus_nattereri
ENSFHEG00000004532	rab34b	100	71.484	ENSSFOG00015005188	rab34	99	71.484	Scleropages_formosus
ENSFHEG00000004532	rab34b	93	84.255	ENSSMAG00000019926	rab34b	100	81.013	Scophthalmus_maximus
ENSFHEG00000004532	rab34b	100	88.627	ENSSDUG00000016760	rab34b	80	88.627	Seriola_dumerili
ENSFHEG00000004532	rab34b	72	92.391	ENSSLDG00000014812	rab34b	90	92.391	Seriola_lalandi_dorsalis
ENSFHEG00000004532	rab34b	100	84.646	ENSSPAG00000002801	rab34b	100	84.646	Stegastes_partitus
ENSFHEG00000004532	rab34b	94	82.500	ENSTRUG00000014481	rab34b	97	82.500	Takifugu_rubripes
ENSFHEG00000004532	rab34b	100	80.000	ENSTNIG00000016158	rab34b	99	80.000	Tetraodon_nigroviridis