EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSFHEG00000004544 (Gene tree)
Gene ID: 105927139
Gene Symbol: si:ch1073-335m2.2
Alias: -
Full Name: msx2-interacting protein-like
Gene Type: protein_coding
Species: Fundulus_heteroclitus
Status: putative
Strand: Plus strand
Length: 22870 bases
Position: chrKN811305.1:2565950-2588819
Accession: 105927139
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSFHEP00000003659	RRM_5	PF13893.6	3e-07	1	1
ENSFHEP00000003659	RRM_1	PF00076.22	2.5e-43	1	3
ENSFHEP00000003659	RRM_1	PF00076.22	2.5e-43	2	3
ENSFHEP00000003659	RRM_1	PF00076.22	2.5e-43	3	3

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSFHET00000010175	-	12368	XM_012863764	ENSFHEP00000003659	3131 (aa)	XP_012719218	UPI000644D142

Gene Model

Click here to download ENSFHEG00000004544's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSFHEG00000004544's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSFHEG00000004544	si:ch1073-335m2.2	77	73.430	ENSG00000065526	SPEN	85	80.478	Homo_sapiens
ENSFHEG00000004544	si:ch1073-335m2.2	100	72.183	ENSAPOG00000011411	si:ch1073-335m2.2	100	72.091	Acanthochromis_polyacanthus
ENSFHEG00000004544	si:ch1073-335m2.2	68	82.456	ENSAMEG00000011817	SPEN	87	82.456	Ailuropoda_melanoleuca
ENSFHEG00000004544	si:ch1073-335m2.2	100	80.541	ENSAOCG00000014505	-	99	74.528	Amphiprion_ocellaris
ENSFHEG00000004544	si:ch1073-335m2.2	89	69.672	ENSAOCG00000008077	si:ch1073-335m2.2	99	69.672	Amphiprion_ocellaris
ENSFHEG00000004544	si:ch1073-335m2.2	100	71.789	ENSAPEG00000013515	si:ch1073-335m2.2	100	71.759	Amphiprion_percula
ENSFHEG00000004544	si:ch1073-335m2.2	100	80.541	ENSAPEG00000010288	-	99	74.528	Amphiprion_percula
ENSFHEG00000004544	si:ch1073-335m2.2	99	79.651	ENSATEG00000005627	-	52	75.238	Anabas_testudineus
ENSFHEG00000004544	si:ch1073-335m2.2	100	68.788	ENSATEG00000007674	si:ch1073-335m2.2	100	68.849	Anabas_testudineus
ENSFHEG00000004544	si:ch1073-335m2.2	51	83.626	ENSACAG00000013761	SPEN	69	83.626	Anolis_carolinensis
ENSFHEG00000004544	si:ch1073-335m2.2	85	82.317	ENSANAG00000034428	SPEN	76	82.317	Aotus_nancymaae
ENSFHEG00000004544	si:ch1073-335m2.2	99	72.947	ENSACLG00000016922	-	97	72.947	Astatotilapia_calliptera
ENSFHEG00000004544	si:ch1073-335m2.2	100	68.704	ENSACLG00000021433	si:ch1073-335m2.2	100	68.858	Astatotilapia_calliptera
ENSFHEG00000004544	si:ch1073-335m2.2	99	77.540	ENSAMXG00000012485	spen	95	77.540	Astyanax_mexicanus
ENSFHEG00000004544	si:ch1073-335m2.2	86	75.000	ENSBTAG00000018729	SPEN	66	74.510	Bos_taurus
ENSFHEG00000004544	si:ch1073-335m2.2	86	78.857	ENSCJAG00000008527	SPEN	76	78.857	Callithrix_jacchus
ENSFHEG00000004544	si:ch1073-335m2.2	81	57.185	ENSCAFG00000016132	-	75	58.481	Canis_familiaris
ENSFHEG00000004544	si:ch1073-335m2.2	86	75.000	ENSCHIG00000025070	SPEN	89	74.510	Capra_hircus
ENSFHEG00000004544	si:ch1073-335m2.2	67	74.020	ENSTSYG00000036016	SPEN	57	74.020	Carlito_syrichta
ENSFHEG00000004544	si:ch1073-335m2.2	57	72.947	ENSCAPG00000013803	SPEN	84	72.464	Cavia_aperea
ENSFHEG00000004544	si:ch1073-335m2.2	57	72.947	ENSCPOG00000014036	SPEN	84	72.464	Cavia_porcellus
ENSFHEG00000004544	si:ch1073-335m2.2	77	73.913	ENSCCAG00000020258	SPEN	77	73.430	Cebus_capucinus
ENSFHEG00000004544	si:ch1073-335m2.2	81	81.481	ENSCATG00000015079	SPEN	77	77.703	Cercocebus_atys
ENSFHEG00000004544	si:ch1073-335m2.2	92	72.464	ENSCLAG00000002018	SPEN	59	71.981	Chinchilla_lanigera
ENSFHEG00000004544	si:ch1073-335m2.2	73	81.006	ENSCPBG00000010477	SPEN	69	81.006	Chrysemys_picta_bellii
ENSFHEG00000004544	si:ch1073-335m2.2	86	73.913	ENSCANG00000034547	SPEN	77	73.430	Colobus_angolensis_palliatus
ENSFHEG00000004544	si:ch1073-335m2.2	87	74.000	ENSCGRG00001007725	Spen	88	74.000	Cricetulus_griseus_chok1gshd
ENSFHEG00000004544	si:ch1073-335m2.2	77	74.000	ENSCGRG00000010581	Spen	88	74.000	Cricetulus_griseus_crigri
ENSFHEG00000004544	si:ch1073-335m2.2	100	64.800	ENSCSEG00000003915	-	99	64.800	Cynoglossus_semilaevis
ENSFHEG00000004544	si:ch1073-335m2.2	99	84.524	ENSCVAG00000016346	-	96	84.524	Cyprinodon_variegatus
ENSFHEG00000004544	si:ch1073-335m2.2	100	79.052	ENSCVAG00000009075	si:ch1073-335m2.2	100	79.302	Cyprinodon_variegatus
ENSFHEG00000004544	si:ch1073-335m2.2	95	82.840	ENSDARG00000074245	spen	100	81.481	Danio_rerio
ENSFHEG00000004544	si:ch1073-335m2.2	100	52.382	ENSDARG00000074332	si:ch1073-335m2.2	100	52.381	Danio_rerio
ENSFHEG00000004544	si:ch1073-335m2.2	88	60.650	ENSDNOG00000041948	SPEN	76	73.430	Dasypus_novemcinctus
ENSFHEG00000004544	si:ch1073-335m2.2	86	73.206	ENSDORG00000023909	Spen	86	73.206	Dipodomys_ordii
ENSFHEG00000004544	si:ch1073-335m2.2	60	83.721	ENSEEUG00000010255	SPEN	61	83.721	Erinaceus_europaeus
ENSFHEG00000004544	si:ch1073-335m2.2	100	58.829	ENSELUG00000007726	si:ch1073-335m2.2	100	59.228	Esox_lucius
ENSFHEG00000004544	si:ch1073-335m2.2	84	82.249	ENSFDAG00000010212	SPEN	83	82.249	Fukomys_damarensis
ENSFHEG00000004544	si:ch1073-335m2.2	100	61.845	ENSGMOG00000008156	si:ch1073-335m2.2	100	61.613	Gadus_morhua
ENSFHEG00000004544	si:ch1073-335m2.2	65	72.549	ENSGMOG00000008397	-	80	78.035	Gadus_morhua
ENSFHEG00000004544	si:ch1073-335m2.2	54	74.879	ENSGALG00000036932	SPEN	57	74.879	Gallus_gallus
ENSFHEG00000004544	si:ch1073-335m2.2	100	81.784	ENSGAFG00000021570	si:ch1073-335m2.2	100	81.676	Gambusia_affinis
ENSFHEG00000004544	si:ch1073-335m2.2	71	78.610	ENSGACG00000005341	-	70	78.610	Gasterosteus_aculeatus
ENSFHEG00000004544	si:ch1073-335m2.2	100	66.348	ENSGACG00000001176	si:ch1073-335m2.2	100	66.158	Gasterosteus_aculeatus
ENSFHEG00000004544	si:ch1073-335m2.2	56	74.510	ENSGAGG00000020785	SPEN	63	74.510	Gopherus_agassizii
ENSFHEG00000004544	si:ch1073-335m2.2	86	73.430	ENSGGOG00000012041	SPEN	77	72.947	Gorilla_gorilla
ENSFHEG00000004544	si:ch1073-335m2.2	99	73.430	ENSHBUG00000020626	-	97	73.430	Haplochromis_burtoni
ENSFHEG00000004544	si:ch1073-335m2.2	100	68.640	ENSHBUG00000023253	si:ch1073-335m2.2	100	68.835	Haplochromis_burtoni
ENSFHEG00000004544	si:ch1073-335m2.2	67	71.981	ENSHGLG00000019259	SPEN	57	71.498	Heterocephalus_glaber_female
ENSFHEG00000004544	si:ch1073-335m2.2	63	71.981	ENSHGLG00100019294	SPEN	57	71.498	Heterocephalus_glaber_male
ENSFHEG00000004544	si:ch1073-335m2.2	96	63.633	ENSHCOG00000006004	si:ch1073-335m2.2	99	63.166	Hippocampus_comes
ENSFHEG00000004544	si:ch1073-335m2.2	96	52.704	ENSIPUG00000018212	si:ch1073-335m2.2	99	52.881	Ictalurus_punctatus
ENSFHEG00000004544	si:ch1073-335m2.2	96	73.711	ENSIPUG00000021668	spen	94	73.711	Ictalurus_punctatus
ENSFHEG00000004544	si:ch1073-335m2.2	82	82.456	ENSSTOG00000021428	SPEN	87	82.456	Ictidomys_tridecemlineatus
ENSFHEG00000004544	si:ch1073-335m2.2	66	73.430	ENSJJAG00000010882	Spen	62	72.947	Jaculus_jaculus
ENSFHEG00000004544	si:ch1073-335m2.2	99	79.651	ENSKMAG00000003882	-	98	73.810	Kryptolebias_marmoratus
ENSFHEG00000004544	si:ch1073-335m2.2	100	72.014	ENSKMAG00000021725	si:ch1073-335m2.2	100	71.829	Kryptolebias_marmoratus
ENSFHEG00000004544	si:ch1073-335m2.2	100	68.455	ENSLBEG00000020855	si:ch1073-335m2.2	100	68.485	Labrus_bergylta
ENSFHEG00000004544	si:ch1073-335m2.2	80	76.471	ENSLBEG00000019129	-	89	62.388	Labrus_bergylta
ENSFHEG00000004544	si:ch1073-335m2.2	94	79.444	ENSLACG00000003258	SPEN	89	79.444	Latimeria_chalumnae
ENSFHEG00000004544	si:ch1073-335m2.2	56	83.140	ENSLOCG00000007896	si:ch1073-335m2.2	96	83.140	Lepisosteus_oculatus
ENSFHEG00000004544	si:ch1073-335m2.2	60	73.913	ENSLAFG00000004524	SPEN	62	73.913	Loxodonta_africana
ENSFHEG00000004544	si:ch1073-335m2.2	87	73.913	ENSMFAG00000041974	SPEN	78	73.430	Macaca_fascicularis
ENSFHEG00000004544	si:ch1073-335m2.2	87	73.913	ENSMMUG00000008026	SPEN	78	73.430	Macaca_mulatta
ENSFHEG00000004544	si:ch1073-335m2.2	87	73.913	ENSMNEG00000042402	SPEN	78	73.430	Macaca_nemestrina
ENSFHEG00000004544	si:ch1073-335m2.2	87	73.913	ENSMLEG00000039293	SPEN	77	73.430	Mandrillus_leucophaeus
ENSFHEG00000004544	si:ch1073-335m2.2	100	69.908	ENSMAMG00000023870	si:ch1073-335m2.2	100	69.969	Mastacembelus_armatus
ENSFHEG00000004544	si:ch1073-335m2.2	100	68.683	ENSMZEG00005011762	si:ch1073-335m2.2	100	68.898	Maylandia_zebra
ENSFHEG00000004544	si:ch1073-335m2.2	89	72.947	ENSMZEG00005021491	-	97	72.947	Maylandia_zebra
ENSFHEG00000004544	si:ch1073-335m2.2	90	73.430	ENSMICG00000030994	SPEN	51	73.430	Microcebus_murinus
ENSFHEG00000004544	si:ch1073-335m2.2	54	82.456	ENSMOCG00000016083	Spen	89	82.456	Microtus_ochrogaster
ENSFHEG00000004544	si:ch1073-335m2.2	100	67.662	ENSMMOG00000021742	si:ch1073-335m2.2	100	67.655	Mola_mola
ENSFHEG00000004544	si:ch1073-335m2.2	97	78.947	ENSMODG00000003411	SPEN	88	78.947	Monodelphis_domestica
ENSFHEG00000004544	si:ch1073-335m2.2	100	80.000	ENSMALG00000008625	-	99	73.810	Monopterus_albus
ENSFHEG00000004544	si:ch1073-335m2.2	86	82.456	MGP_CAROLIEiJ_G0026745	Spen	85	82.456	Mus_caroli
ENSFHEG00000004544	si:ch1073-335m2.2	66	80.791	ENSMUSG00000040761	Spen	62	80.791	Mus_musculus
ENSFHEG00000004544	si:ch1073-335m2.2	65	82.456	MGP_PahariEiJ_G0029076	Spen	58	82.456	Mus_pahari
ENSFHEG00000004544	si:ch1073-335m2.2	86	80.791	MGP_SPRETEiJ_G0027724	Spen	85	80.791	Mus_spretus
ENSFHEG00000004544	si:ch1073-335m2.2	84	79.235	ENSMPUG00000016317	SPEN	84	73.430	Mustela_putorius_furo
ENSFHEG00000004544	si:ch1073-335m2.2	89	44.144	ENSMLUG00000010144	SPEN	99	65.549	Myotis_lucifugus
ENSFHEG00000004544	si:ch1073-335m2.2	92	72.947	ENSNGAG00000000641	Spen	94	72.947	Nannospalax_galili
ENSFHEG00000004544	si:ch1073-335m2.2	100	67.840	ENSNBRG00000005733	si:ch1073-335m2.2	100	67.963	Neolamprologus_brichardi
ENSFHEG00000004544	si:ch1073-335m2.2	72	73.913	ENSNBRG00000022090	-	93	73.913	Neolamprologus_brichardi
ENSFHEG00000004544	si:ch1073-335m2.2	77	73.430	ENSNLEG00000007652	SPEN	77	72.947	Nomascus_leucogenys
ENSFHEG00000004544	si:ch1073-335m2.2	65	80.000	ENSMEUG00000002422	SPEN	63	80.000	Notamacropus_eugenii
ENSFHEG00000004544	si:ch1073-335m2.2	61	74.510	ENSOPRG00000015800	SPEN	74	74.020	Ochotona_princeps
ENSFHEG00000004544	si:ch1073-335m2.2	64	72.464	ENSODEG00000016644	SPEN	93	71.981	Octodon_degus
ENSFHEG00000004544	si:ch1073-335m2.2	100	73.913	ENSONIG00000006573	-	99	69.439	Oreochromis_niloticus
ENSFHEG00000004544	si:ch1073-335m2.2	54	74.396	ENSOCUG00000010840	SPEN	79	73.913	Oryctolagus_cuniculus
ENSFHEG00000004544	si:ch1073-335m2.2	100	68.723	ENSORLG00000018414	si:ch1073-335m2.2	100	68.754	Oryzias_latipes
ENSFHEG00000004544	si:ch1073-335m2.2	100	68.599	ENSORLG00020009351	si:ch1073-335m2.2	100	68.630	Oryzias_latipes_hni
ENSFHEG00000004544	si:ch1073-335m2.2	100	68.506	ENSORLG00015005537	si:ch1073-335m2.2	100	68.537	Oryzias_latipes_hsok
ENSFHEG00000004544	si:ch1073-335m2.2	100	69.696	ENSOMEG00000004509	si:ch1073-335m2.2	100	69.789	Oryzias_melastigma
ENSFHEG00000004544	si:ch1073-335m2.2	85	82.456	ENSOGAG00000025110	SPEN	88	73.430	Otolemur_garnettii
ENSFHEG00000004544	si:ch1073-335m2.2	76	73.430	ENSPPAG00000035690	SPEN	77	72.947	Pan_paniscus
ENSFHEG00000004544	si:ch1073-335m2.2	77	73.430	ENSPTRG00000000210	SPEN	77	72.947	Pan_troglodytes
ENSFHEG00000004544	si:ch1073-335m2.2	87	73.913	ENSPANG00000006293	SPEN	78	73.430	Papio_anubis
ENSFHEG00000004544	si:ch1073-335m2.2	97	92.857	ENSPKIG00000010492	si:ch1073-335m2.2	98	92.857	Paramormyrops_kingsleyae
ENSFHEG00000004544	si:ch1073-335m2.2	100	78.756	ENSPKIG00000002617	SPEN	91	69.811	Paramormyrops_kingsleyae
ENSFHEG00000004544	si:ch1073-335m2.2	53	74.020	ENSPEMG00000022997	Spen	88	74.020	Peromyscus_maniculatus_bairdii
ENSFHEG00000004544	si:ch1073-335m2.2	100	81.048	ENSPFOG00000017986	si:ch1073-335m2.2	100	81.205	Poecilia_formosa
ENSFHEG00000004544	si:ch1073-335m2.2	100	81.338	ENSPLAG00000016625	si:ch1073-335m2.2	100	81.438	Poecilia_latipinna
ENSFHEG00000004544	si:ch1073-335m2.2	94	65.863	ENSPMEG00000006764	-	98	65.863	Poecilia_mexicana
ENSFHEG00000004544	si:ch1073-335m2.2	100	81.268	ENSPMEG00000002674	si:ch1073-335m2.2	100	81.425	Poecilia_mexicana
ENSFHEG00000004544	si:ch1073-335m2.2	94	73.585	ENSPREG00000010399	-	98	73.585	Poecilia_reticulata
ENSFHEG00000004544	si:ch1073-335m2.2	100	81.513	ENSPREG00000005357	si:ch1073-335m2.2	100	82.015	Poecilia_reticulata
ENSFHEG00000004544	si:ch1073-335m2.2	78	73.430	ENSPCAG00000009543	SPEN	74	73.430	Procavia_capensis
ENSFHEG00000004544	si:ch1073-335m2.2	89	71.154	ENSPCOG00000021735	SPEN	82	70.673	Propithecus_coquereli
ENSFHEG00000004544	si:ch1073-335m2.2	63	80.702	ENSPVAG00000013794	SPEN	57	80.702	Pteropus_vampyrus
ENSFHEG00000004544	si:ch1073-335m2.2	100	68.796	ENSPNYG00000009042	si:ch1073-335m2.2	100	68.951	Pundamilia_nyererei
ENSFHEG00000004544	si:ch1073-335m2.2	99	73.430	ENSPNYG00000012379	-	97	73.430	Pundamilia_nyererei
ENSFHEG00000004544	si:ch1073-335m2.2	99	77.457	ENSPNAG00000020795	spen	95	73.367	Pygocentrus_nattereri
ENSFHEG00000004544	si:ch1073-335m2.2	100	54.809	ENSPNAG00000011452	si:ch1073-335m2.2	100	54.877	Pygocentrus_nattereri
ENSFHEG00000004544	si:ch1073-335m2.2	86	73.913	ENSRBIG00000039654	SPEN	78	73.430	Rhinopithecus_bieti
ENSFHEG00000004544	si:ch1073-335m2.2	86	73.913	ENSRROG00000035686	SPEN	77	73.430	Rhinopithecus_roxellana
ENSFHEG00000004544	si:ch1073-335m2.2	86	73.913	ENSSBOG00000028770	SPEN	80	73.430	Saimiri_boliviensis_boliviensis
ENSFHEG00000004544	si:ch1073-335m2.2	53	70.388	ENSSHAG00000004960	SPEN	99	66.357	Sarcophilus_harrisii
ENSFHEG00000004544	si:ch1073-335m2.2	99	85.965	ENSSFOG00015010267	si:ch1073-335m2.2	98	85.965	Scleropages_formosus
ENSFHEG00000004544	si:ch1073-335m2.2	99	72.857	ENSSMAG00000008996	-	53	72.857	Scophthalmus_maximus
ENSFHEG00000004544	si:ch1073-335m2.2	100	69.681	ENSSMAG00000000125	si:ch1073-335m2.2	100	69.559	Scophthalmus_maximus
ENSFHEG00000004544	si:ch1073-335m2.2	100	71.699	ENSSDUG00000008416	si:ch1073-335m2.2	100	71.729	Seriola_dumerili
ENSFHEG00000004544	si:ch1073-335m2.2	100	81.622	ENSSDUG00000003476	-	99	75.472	Seriola_dumerili
ENSFHEG00000004544	si:ch1073-335m2.2	100	68.222	ENSSLDG00000023347	si:ch1073-335m2.2	100	68.314	Seriola_lalandi_dorsalis
ENSFHEG00000004544	si:ch1073-335m2.2	100	81.622	ENSSLDG00000012950	-	99	75.472	Seriola_lalandi_dorsalis
ENSFHEG00000004544	si:ch1073-335m2.2	100	72.278	ENSSPAG00000012454	si:ch1073-335m2.2	100	72.186	Stegastes_partitus
ENSFHEG00000004544	si:ch1073-335m2.2	87	41.739	ENSSSCG00000034484	SPEN	62	50.880	Sus_scrofa
ENSFHEG00000004544	si:ch1073-335m2.2	55	65.574	ENSTRUG00000024350	-	54	65.574	Takifugu_rubripes
ENSFHEG00000004544	si:ch1073-335m2.2	87	62.262	ENSTRUG00000021008	si:ch1073-335m2.2	100	62.004	Takifugu_rubripes
ENSFHEG00000004544	si:ch1073-335m2.2	100	78.191	ENSTNIG00000010907	-	99	67.213	Tetraodon_nigroviridis
ENSFHEG00000004544	si:ch1073-335m2.2	100	66.147	ENSTNIG00000014666	si:ch1073-335m2.2	100	66.147	Tetraodon_nigroviridis
ENSFHEG00000004544	si:ch1073-335m2.2	66	82.456	ENSTBEG00000003628	SPEN	59	82.456	Tupaia_belangeri
ENSFHEG00000004544	si:ch1073-335m2.2	64	83.041	ENSUAMG00000009600	SPEN	59	83.041	Ursus_americanus
ENSFHEG00000004544	si:ch1073-335m2.2	68	83.041	ENSUMAG00000021641	SPEN	58	83.041	Ursus_maritimus
ENSFHEG00000004544	si:ch1073-335m2.2	76	92.857	ENSVVUG00000028951	SPEN	57	92.857	Vulpes_vulpes
ENSFHEG00000004544	si:ch1073-335m2.2	58	51.775	ENSXETG00000023114	SPEN	64	51.622	Xenopus_tropicalis
ENSFHEG00000004544	si:ch1073-335m2.2	100	78.036	ENSXCOG00000004516	si:ch1073-335m2.2	100	77.886	Xiphophorus_couchianus
ENSFHEG00000004544	si:ch1073-335m2.2	93	78.804	ENSXMAG00000021384	-	98	65.060	Xiphophorus_maculatus
ENSFHEG00000004544	si:ch1073-335m2.2	100	81.552	ENSXMAG00000029887	si:ch1073-335m2.2	100	81.401	Xiphophorus_maculatus