EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSFHEG00000004575 (Gene tree)
Gene ID: 105920237
Gene Symbol: si:dkey-17e16.10
Alias: -
Full Name: mitochondrial ribosomal protein S12
Gene Type: protein_coding
Species: Fundulus_heteroclitus
Status: putative
Strand: Plus strand
Length: 3798 bases
Position: chrKN806042.1:72120-75917
Accession: 105920237
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSFHEP00000023517	Ribosom_S12_S23	PF00164.25	4.7e-24	1	1
ENSFHEP00000023537	Ribosom_S12_S23	PF00164.25	4.7e-24	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSFHET00000010116	-	2060	-	ENSFHEP00000023517	142 (aa)	-	UPI0006447CB0
ENSFHET00000010110	-	1908	XM_012855770	ENSFHEP00000023537	142 (aa)	XP_012711224	UPI0006447CB0

Gene Model

Click here to download ENSFHEG00000004575's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSFHEG00000004575's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSFHEG00000004575	si:dkey-17e16.10	52	40.244	ENSFHEG00000019075	rps23	57	40.244

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSFHEG00000004575	si:dkey-17e16.10	77	79.091	ENSG00000128626	MRPS12	80	79.091	Homo_sapiens
ENSFHEG00000004575	si:dkey-17e16.10	100	90.210	ENSAPOG00000005047	si:dkey-17e16.10	100	90.210	Acanthochromis_polyacanthus
ENSFHEG00000004575	si:dkey-17e16.10	80	80.531	ENSAMEG00000008722	MRPS12	81	80.531	Ailuropoda_melanoleuca
ENSFHEG00000004575	si:dkey-17e16.10	100	92.308	ENSACIG00000016095	si:dkey-17e16.10	100	92.308	Amphilophus_citrinellus
ENSFHEG00000004575	si:dkey-17e16.10	100	88.811	ENSAOCG00000018530	si:dkey-17e16.10	100	88.811	Amphiprion_ocellaris
ENSFHEG00000004575	si:dkey-17e16.10	100	88.811	ENSAPEG00000019785	si:dkey-17e16.10	100	88.811	Amphiprion_percula
ENSFHEG00000004575	si:dkey-17e16.10	100	89.510	ENSATEG00000018924	si:dkey-17e16.10	100	89.510	Anabas_testudineus
ENSFHEG00000004575	si:dkey-17e16.10	77	81.818	ENSAPLG00000011925	-	79	81.818	Anas_platyrhynchos
ENSFHEG00000004575	si:dkey-17e16.10	85	69.167	ENSAPLG00000014350	-	81	69.167	Anas_platyrhynchos
ENSFHEG00000004575	si:dkey-17e16.10	77	83.636	ENSACAG00000003829	MRPS12	76	83.636	Anolis_carolinensis
ENSFHEG00000004575	si:dkey-17e16.10	78	80.180	ENSANAG00000033654	MRPS12	80	80.180	Aotus_nancymaae
ENSFHEG00000004575	si:dkey-17e16.10	100	92.308	ENSACLG00000013979	si:dkey-17e16.10	95	92.308	Astatotilapia_calliptera
ENSFHEG00000004575	si:dkey-17e16.10	100	69.863	ENSAMXG00000025945	si:dkey-17e16.10	100	71.918	Astyanax_mexicanus
ENSFHEG00000004575	si:dkey-17e16.10	82	78.448	ENSBTAG00000001782	MRPS12	83	78.448	Bos_taurus
ENSFHEG00000004575	si:dkey-17e16.10	95	46.479	WBGene00011391	mrps-12	87	46.479	Caenorhabditis_elegans
ENSFHEG00000004575	si:dkey-17e16.10	78	80.180	ENSCJAG00000043176	MRPS12	80	80.180	Callithrix_jacchus
ENSFHEG00000004575	si:dkey-17e16.10	95	74.074	ENSCAFG00000005623	MRPS12	83	79.832	Canis_familiaris
ENSFHEG00000004575	si:dkey-17e16.10	95	74.074	ENSCAFG00020016784	MRPS12	83	79.832	Canis_lupus_dingo
ENSFHEG00000004575	si:dkey-17e16.10	82	78.448	ENSCHIG00000013852	MRPS12	83	78.448	Capra_hircus
ENSFHEG00000004575	si:dkey-17e16.10	79	81.250	ENSTSYG00000009568	MRPS12	81	81.250	Carlito_syrichta
ENSFHEG00000004575	si:dkey-17e16.10	80	80.531	ENSCAPG00000009543	MRPS12	83	80.531	Cavia_aperea
ENSFHEG00000004575	si:dkey-17e16.10	80	80.531	ENSCPOG00000035217	MRPS12	81	80.531	Cavia_porcellus
ENSFHEG00000004575	si:dkey-17e16.10	77	79.091	ENSCCAG00000035388	MRPS12	80	79.091	Cebus_capucinus
ENSFHEG00000004575	si:dkey-17e16.10	78	79.279	ENSCATG00000038438	MRPS12	80	79.279	Cercocebus_atys
ENSFHEG00000004575	si:dkey-17e16.10	79	80.357	ENSCLAG00000013286	MRPS12	81	80.357	Chinchilla_lanigera
ENSFHEG00000004575	si:dkey-17e16.10	77	80.000	ENSCSAG00000003929	MRPS12	79	80.000	Chlorocebus_sabaeus
ENSFHEG00000004575	si:dkey-17e16.10	61	83.721	ENSCHOG00000008451	MRPS12	62	83.721	Choloepus_hoffmanni
ENSFHEG00000004575	si:dkey-17e16.10	82	82.051	ENSCPBG00000018941	MRPS12	75	82.051	Chrysemys_picta_bellii
ENSFHEG00000004575	si:dkey-17e16.10	60	68.235	ENSCING00000014236	-	67	52.713	Ciona_intestinalis
ENSFHEG00000004575	si:dkey-17e16.10	70	60.606	ENSCSAVG00000008777	-	52	60.606	Ciona_savignyi
ENSFHEG00000004575	si:dkey-17e16.10	78	79.279	ENSCANG00000003652	MRPS12	80	79.279	Colobus_angolensis_palliatus
ENSFHEG00000004575	si:dkey-17e16.10	82	77.311	ENSCGRG00001018968	Mrps12	86	77.311	Cricetulus_griseus_chok1gshd
ENSFHEG00000004575	si:dkey-17e16.10	82	77.311	ENSCGRG00000007113	Mrps12	86	77.311	Cricetulus_griseus_crigri
ENSFHEG00000004575	si:dkey-17e16.10	100	87.413	ENSCSEG00000001174	si:dkey-17e16.10	100	87.413	Cynoglossus_semilaevis
ENSFHEG00000004575	si:dkey-17e16.10	100	92.308	ENSCVAG00000003253	si:dkey-17e16.10	100	92.308	Cyprinodon_variegatus
ENSFHEG00000004575	si:dkey-17e16.10	100	78.322	ENSDARG00000089836	MRPS12	100	78.322	Danio_rerio
ENSFHEG00000004575	si:dkey-17e16.10	80	82.301	ENSDNOG00000003918	MRPS12	81	82.301	Dasypus_novemcinctus
ENSFHEG00000004575	si:dkey-17e16.10	80	78.070	ENSDORG00000001544	Mrps12	82	78.070	Dipodomys_ordii
ENSFHEG00000004575	si:dkey-17e16.10	80	63.793	FBgn0003714	tko	81	63.793	Drosophila_melanogaster
ENSFHEG00000004575	si:dkey-17e16.10	80	81.416	ENSETEG00000017985	MRPS12	81	81.416	Echinops_telfairi
ENSFHEG00000004575	si:dkey-17e16.10	79	84.821	ENSEBUG00000003529	si:dkey-17e16.10	64	84.821	Eptatretus_burgeri
ENSFHEG00000004575	si:dkey-17e16.10	80	81.416	ENSEASG00005019736	MRPS12	81	81.416	Equus_asinus_asinus
ENSFHEG00000004575	si:dkey-17e16.10	80	81.416	ENSECAG00000013794	MRPS12	81	81.416	Equus_caballus
ENSFHEG00000004575	si:dkey-17e16.10	50	70.423	ENSEEUG00000013868	MRPS12	75	70.423	Erinaceus_europaeus
ENSFHEG00000004575	si:dkey-17e16.10	99	85.915	ENSELUG00000014973	si:dkey-17e16.10	99	85.915	Esox_lucius
ENSFHEG00000004575	si:dkey-17e16.10	80	78.761	ENSFCAG00000014573	MRPS12	81	78.761	Felis_catus
ENSFHEG00000004575	si:dkey-17e16.10	77	77.064	ENSFALG00000015276	MRPS12	95	77.064	Ficedula_albicollis
ENSFHEG00000004575	si:dkey-17e16.10	97	68.310	ENSFDAG00000008482	MRPS12	99	68.310	Fukomys_damarensis
ENSFHEG00000004575	si:dkey-17e16.10	78	96.396	ENSGMOG00000020611	si:dkey-17e16.10	100	96.396	Gadus_morhua
ENSFHEG00000004575	si:dkey-17e16.10	78	81.982	ENSGALG00000038667	MRPS12	82	81.982	Gallus_gallus
ENSFHEG00000004575	si:dkey-17e16.10	99	91.489	ENSGAFG00000007521	si:dkey-17e16.10	99	91.489	Gambusia_affinis
ENSFHEG00000004575	si:dkey-17e16.10	78	94.595	ENSGACG00000003011	si:dkey-17e16.10	100	94.595	Gasterosteus_aculeatus
ENSFHEG00000004575	si:dkey-17e16.10	82	83.621	ENSGAGG00000009748	MRPS12	74	83.621	Gopherus_agassizii
ENSFHEG00000004575	si:dkey-17e16.10	77	79.091	ENSGGOG00000002500	MRPS12	80	79.091	Gorilla_gorilla
ENSFHEG00000004575	si:dkey-17e16.10	100	91.549	ENSHBUG00000014480	si:dkey-17e16.10	100	91.549	Haplochromis_burtoni
ENSFHEG00000004575	si:dkey-17e16.10	80	75.439	ENSHGLG00000014942	MRPS12	81	75.439	Heterocephalus_glaber_female
ENSFHEG00000004575	si:dkey-17e16.10	80	75.439	ENSHGLG00100017710	MRPS12	81	75.439	Heterocephalus_glaber_male
ENSFHEG00000004575	si:dkey-17e16.10	100	81.250	ENSHCOG00000010444	si:dkey-17e16.10	96	81.250	Hippocampus_comes
ENSFHEG00000004575	si:dkey-17e16.10	100	84.615	ENSIPUG00000024651	MRPS12	100	84.615	Ictalurus_punctatus
ENSFHEG00000004575	si:dkey-17e16.10	80	81.416	ENSSTOG00000009006	MRPS12	81	81.416	Ictidomys_tridecemlineatus
ENSFHEG00000004575	si:dkey-17e16.10	80	77.876	ENSJJAG00000017837	Mrps12	81	77.876	Jaculus_jaculus
ENSFHEG00000004575	si:dkey-17e16.10	100	88.112	ENSKMAG00000007949	si:dkey-17e16.10	91	88.112	Kryptolebias_marmoratus
ENSFHEG00000004575	si:dkey-17e16.10	87	92.683	ENSLBEG00000001112	si:dkey-17e16.10	88	92.683	Labrus_bergylta
ENSFHEG00000004575	si:dkey-17e16.10	80	86.726	ENSLACG00000018393	MRPS12	71	86.726	Latimeria_chalumnae
ENSFHEG00000004575	si:dkey-17e16.10	100	70.748	ENSLOCG00000000535	si:dkey-17e16.10	100	70.748	Lepisosteus_oculatus
ENSFHEG00000004575	si:dkey-17e16.10	80	76.991	ENSLAFG00000022140	MRPS12	81	76.991	Loxodonta_africana
ENSFHEG00000004575	si:dkey-17e16.10	78	80.180	ENSMFAG00000044563	MRPS12	80	80.180	Macaca_fascicularis
ENSFHEG00000004575	si:dkey-17e16.10	78	79.279	ENSMNEG00000040379	MRPS12	80	79.279	Macaca_nemestrina
ENSFHEG00000004575	si:dkey-17e16.10	78	79.279	ENSMLEG00000036963	MRPS12	80	79.279	Mandrillus_leucophaeus
ENSFHEG00000004575	si:dkey-17e16.10	100	88.112	ENSMAMG00000017962	si:dkey-17e16.10	100	88.112	Mastacembelus_armatus
ENSFHEG00000004575	si:dkey-17e16.10	100	92.308	ENSMZEG00005017336	si:dkey-17e16.10	100	92.308	Maylandia_zebra
ENSFHEG00000004575	si:dkey-17e16.10	78	81.081	ENSMGAG00000005414	MRPS12	78	81.081	Meleagris_gallopavo
ENSFHEG00000004575	si:dkey-17e16.10	57	77.108	ENSMAUG00000019146	Mrps12	81	77.108	Mesocricetus_auratus
ENSFHEG00000004575	si:dkey-17e16.10	80	80.531	ENSMICG00000045111	MRPS12	81	80.531	Microcebus_murinus
ENSFHEG00000004575	si:dkey-17e16.10	82	79.661	ENSMOCG00000012666	Mrps12	88	79.661	Microtus_ochrogaster
ENSFHEG00000004575	si:dkey-17e16.10	79	93.750	ENSMMOG00000010803	si:dkey-17e16.10	77	93.750	Mola_mola
ENSFHEG00000004575	si:dkey-17e16.10	96	67.647	ENSMODG00000013431	MRPS12	92	67.647	Monodelphis_domestica
ENSFHEG00000004575	si:dkey-17e16.10	100	89.510	ENSMALG00000004190	si:dkey-17e16.10	100	89.510	Monopterus_albus
ENSFHEG00000004575	si:dkey-17e16.10	80	80.531	MGP_CAROLIEiJ_G0029457	Mrps12	85	81.132	Mus_caroli
ENSFHEG00000004575	si:dkey-17e16.10	80	80.531	ENSMUSG00000045948	Mrps12	85	81.132	Mus_musculus
ENSFHEG00000004575	si:dkey-17e16.10	96	71.324	MGP_PahariEiJ_G0012691	Mrps12	85	80.189	Mus_pahari
ENSFHEG00000004575	si:dkey-17e16.10	80	80.531	MGP_SPRETEiJ_G0030553	Mrps12	85	81.132	Mus_spretus
ENSFHEG00000004575	si:dkey-17e16.10	97	71.014	ENSMPUG00000017750	MRPS12	99	71.014	Mustela_putorius_furo
ENSFHEG00000004575	si:dkey-17e16.10	80	80.531	ENSMLUG00000006076	MRPS12	81	80.531	Myotis_lucifugus
ENSFHEG00000004575	si:dkey-17e16.10	80	81.416	ENSNGAG00000022099	Mrps12	81	81.416	Nannospalax_galili
ENSFHEG00000004575	si:dkey-17e16.10	100	92.308	ENSNBRG00000007244	si:dkey-17e16.10	100	92.308	Neolamprologus_brichardi
ENSFHEG00000004575	si:dkey-17e16.10	78	72.973	ENSMEUG00000005688	MRPS12	99	72.973	Notamacropus_eugenii
ENSFHEG00000004575	si:dkey-17e16.10	80	79.646	ENSODEG00000016161	MRPS12	86	79.646	Octodon_degus
ENSFHEG00000004575	si:dkey-17e16.10	100	92.308	ENSONIG00000002022	si:dkey-17e16.10	100	92.308	Oreochromis_niloticus
ENSFHEG00000004575	si:dkey-17e16.10	79	80.357	ENSOCUG00000000689	MRPS12	81	80.357	Oryctolagus_cuniculus
ENSFHEG00000004575	si:dkey-17e16.10	100	87.324	ENSORLG00000007040	si:dkey-17e16.10	100	87.324	Oryzias_latipes
ENSFHEG00000004575	si:dkey-17e16.10	100	87.324	ENSORLG00020011268	MRPS12	100	87.324	Oryzias_latipes_hni
ENSFHEG00000004575	si:dkey-17e16.10	100	87.324	ENSORLG00015009378	MRPS12	100	87.324	Oryzias_latipes_hsok
ENSFHEG00000004575	si:dkey-17e16.10	100	87.324	ENSOMEG00000001427	si:dkey-17e16.10	100	87.324	Oryzias_melastigma
ENSFHEG00000004575	si:dkey-17e16.10	80	81.416	ENSOGAG00000008295	-	81	81.416	Otolemur_garnettii
ENSFHEG00000004575	si:dkey-17e16.10	80	73.451	ENSOGAG00000025634	-	81	73.451	Otolemur_garnettii
ENSFHEG00000004575	si:dkey-17e16.10	82	78.448	ENSOARG00000005927	MRPS12	83	78.448	Ovis_aries
ENSFHEG00000004575	si:dkey-17e16.10	77	79.091	ENSPPAG00000041637	MRPS12	80	79.091	Pan_paniscus
ENSFHEG00000004575	si:dkey-17e16.10	80	78.761	ENSPPRG00000011742	MRPS12	81	78.761	Panthera_pardus
ENSFHEG00000004575	si:dkey-17e16.10	62	82.955	ENSPTIG00000008427	MRPS12	99	69.106	Panthera_tigris_altaica
ENSFHEG00000004575	si:dkey-17e16.10	77	79.091	ENSPTRG00000010948	MRPS12	80	79.091	Pan_troglodytes
ENSFHEG00000004575	si:dkey-17e16.10	78	79.279	ENSPANG00000021673	MRPS12	80	79.279	Papio_anubis
ENSFHEG00000004575	si:dkey-17e16.10	100	78.322	ENSPKIG00000006716	si:dkey-17e16.10	100	78.322	Paramormyrops_kingsleyae
ENSFHEG00000004575	si:dkey-17e16.10	96	74.453	ENSPSIG00000014383	MRPS12	81	74.453	Pelodiscus_sinensis
ENSFHEG00000004575	si:dkey-17e16.10	100	80.822	ENSPMGG00000009631	si:dkey-17e16.10	100	80.822	Periophthalmus_magnuspinnatus
ENSFHEG00000004575	si:dkey-17e16.10	82	78.992	ENSPEMG00000016700	Mrps12	86	78.992	Peromyscus_maniculatus_bairdii
ENSFHEG00000004575	si:dkey-17e16.10	99	63.946	ENSPMAG00000008051	si:dkey-17e16.10	94	63.946	Petromyzon_marinus
ENSFHEG00000004575	si:dkey-17e16.10	77	79.091	ENSPCIG00000010531	-	78	79.091	Phascolarctos_cinereus
ENSFHEG00000004575	si:dkey-17e16.10	100	93.706	ENSPFOG00000018863	si:dkey-17e16.10	100	93.706	Poecilia_formosa
ENSFHEG00000004575	si:dkey-17e16.10	100	93.706	ENSPLAG00000008933	si:dkey-17e16.10	100	93.706	Poecilia_latipinna
ENSFHEG00000004575	si:dkey-17e16.10	100	93.007	ENSPMEG00000005155	si:dkey-17e16.10	95	93.007	Poecilia_mexicana
ENSFHEG00000004575	si:dkey-17e16.10	99	92.199	ENSPREG00000014123	si:dkey-17e16.10	95	92.199	Poecilia_reticulata
ENSFHEG00000004575	si:dkey-17e16.10	77	79.091	ENSPPYG00000009950	MRPS12	80	79.091	Pongo_abelii
ENSFHEG00000004575	si:dkey-17e16.10	80	78.761	ENSPCAG00000010853	MRPS12	82	78.761	Procavia_capensis
ENSFHEG00000004575	si:dkey-17e16.10	80	79.646	ENSPCOG00000020370	MRPS12	81	79.646	Propithecus_coquereli
ENSFHEG00000004575	si:dkey-17e16.10	80	76.106	ENSPVAG00000011605	MRPS12	81	76.106	Pteropus_vampyrus
ENSFHEG00000004575	si:dkey-17e16.10	100	92.308	ENSPNYG00000015506	si:dkey-17e16.10	95	92.308	Pundamilia_nyererei
ENSFHEG00000004575	si:dkey-17e16.10	80	88.496	ENSPNAG00000016315	si:dkey-17e16.10	76	88.496	Pygocentrus_nattereri
ENSFHEG00000004575	si:dkey-17e16.10	80	81.416	ENSRNOG00000019949	Mrps12	81	81.416	Rattus_norvegicus
ENSFHEG00000004575	si:dkey-17e16.10	78	79.279	ENSRBIG00000029741	MRPS12	80	79.279	Rhinopithecus_bieti
ENSFHEG00000004575	si:dkey-17e16.10	78	79.279	ENSRROG00000030787	MRPS12	80	79.279	Rhinopithecus_roxellana
ENSFHEG00000004575	si:dkey-17e16.10	78	80.180	ENSSBOG00000025707	MRPS12	80	80.180	Saimiri_boliviensis_boliviensis
ENSFHEG00000004575	si:dkey-17e16.10	100	74.825	ENSSFOG00015018102	mrps12	100	74.825	Scleropages_formosus
ENSFHEG00000004575	si:dkey-17e16.10	100	90.210	ENSSMAG00000004249	si:dkey-17e16.10	100	90.210	Scophthalmus_maximus
ENSFHEG00000004575	si:dkey-17e16.10	100	90.210	ENSSDUG00000020424	si:dkey-17e16.10	99	90.210	Seriola_dumerili
ENSFHEG00000004575	si:dkey-17e16.10	100	90.210	ENSSLDG00000016320	si:dkey-17e16.10	99	90.210	Seriola_lalandi_dorsalis
ENSFHEG00000004575	si:dkey-17e16.10	82	77.586	ENSSARG00000006985	MRPS12	83	77.586	Sorex_araneus
ENSFHEG00000004575	si:dkey-17e16.10	94	72.662	ENSSPUG00000004675	MRPS12	91	72.662	Sphenodon_punctatus
ENSFHEG00000004575	si:dkey-17e16.10	100	87.413	ENSSPAG00000012951	si:dkey-17e16.10	100	87.413	Stegastes_partitus
ENSFHEG00000004575	si:dkey-17e16.10	82	79.310	ENSSSCG00000031860	MRPS12	91	79.310	Sus_scrofa
ENSFHEG00000004575	si:dkey-17e16.10	77	76.364	ENSTGUG00000016491	MRPS12	100	76.364	Taeniopygia_guttata
ENSFHEG00000004575	si:dkey-17e16.10	85	88.430	ENSTRUG00000017342	si:dkey-17e16.10	85	88.430	Takifugu_rubripes
ENSFHEG00000004575	si:dkey-17e16.10	91	82.946	ENSTNIG00000004898	si:dkey-17e16.10	94	82.946	Tetraodon_nigroviridis
ENSFHEG00000004575	si:dkey-17e16.10	80	80.531	ENSTBEG00000001288	MRPS12	81	80.531	Tupaia_belangeri
ENSFHEG00000004575	si:dkey-17e16.10	82	78.448	ENSTTRG00000011794	MRPS12	83	78.448	Tursiops_truncatus
ENSFHEG00000004575	si:dkey-17e16.10	80	77.876	ENSUAMG00000011626	MRPS12	81	77.876	Ursus_americanus
ENSFHEG00000004575	si:dkey-17e16.10	80	79.646	ENSUMAG00000019235	MRPS12	81	79.646	Ursus_maritimus
ENSFHEG00000004575	si:dkey-17e16.10	84	78.992	ENSVVUG00000006433	MRPS12	58	78.992	Vulpes_vulpes
ENSFHEG00000004575	si:dkey-17e16.10	82	81.897	ENSXETG00000005326	mrps12	78	81.897	Xenopus_tropicalis
ENSFHEG00000004575	si:dkey-17e16.10	99	92.199	ENSXCOG00000020766	si:dkey-17e16.10	95	92.199	Xiphophorus_couchianus
ENSFHEG00000004575	si:dkey-17e16.10	99	92.199	ENSXMAG00000027119	si:dkey-17e16.10	99	92.199	Xiphophorus_maculatus