EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSFHEG00000004627 (Gene tree)
Gene ID: 105938091
Gene Symbol: dkc1
Alias: fc87a02|fi24a05|fv62a07|wu:fa28f10|wu:fc87a02|wu:fi24a05|wu:fv62a07|zgc:110395
Full Name: dyskerin pseudouridine synthase 1
Gene Type: protein_coding
Species: Fundulus_heteroclitus
Status: putative
Strand: Plus strand
Length: 7375 bases
Position: chrKN811533.1:704119-711493
Accession: 105938091
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSFHEP00000003722	TruB_N	PF01509.18	2.9e-21	1	1
ENSFHEP00000023528	TruB_N	PF01509.18	1.2e-19	1	1
ENSFHEP00000023528	PUA	PF01472.20	1.4e-16	1	1
ENSFHEP00000003722	PUA	PF01472.20	1.5e-16	1	1
ENSFHEP00000023528	DKCLD	PF08068.12	3.1e-31	1	1
ENSFHEP00000003722	DKCLD	PF08068.12	4e-31	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSFHET00000010087	-	1602	-	ENSFHEP00000003722	533 (aa)	-	-
ENSFHET00000010070	-	3034	XM_012879711	ENSFHEP00000023528	501 (aa)	XP_012735165	A0A146V763

Gene Model

Click here to download ENSFHEG00000004627's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSFHEG00000004627's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSFHEG00000004627	dkc1	89	78.233	ENSG00000130826	DKC1	99	87.379	Homo_sapiens
ENSFHEG00000004627	dkc1	97	86.531	ENSAPOG00000007799	dkc1	88	88.419	Acanthochromis_polyacanthus
ENSFHEG00000004627	dkc1	89	78.652	ENSAMEG00000002776	DKC1	85	81.106	Ailuropoda_melanoleuca
ENSFHEG00000004627	dkc1	86	88.605	ENSACIG00000022614	dkc1	86	89.202	Amphilophus_citrinellus
ENSFHEG00000004627	dkc1	97	86.558	ENSAOCG00000013159	dkc1	86	89.835	Amphiprion_ocellaris
ENSFHEG00000004627	dkc1	97	86.558	ENSAPEG00000002284	dkc1	87	89.671	Amphiprion_percula
ENSFHEG00000004627	dkc1	87	86.682	ENSATEG00000013682	dkc1	86	86.957	Anabas_testudineus
ENSFHEG00000004627	dkc1	93	77.302	ENSACAG00000015600	DKC1	69	87.154	Anolis_carolinensis
ENSFHEG00000004627	dkc1	89	78.233	ENSANAG00000022732	DKC1	86	80.272	Aotus_nancymaae
ENSFHEG00000004627	dkc1	94	85.501	ENSACLG00000015605	dkc1	81	93.182	Astatotilapia_calliptera
ENSFHEG00000004627	dkc1	90	85.275	ENSAMXG00000017108	dkc1	84	88.863	Astyanax_mexicanus
ENSFHEG00000004627	dkc1	89	78.448	ENSBTAG00000013045	DKC1	87	80.499	Bos_taurus
ENSFHEG00000004627	dkc1	81	64.865	WBGene00010478	K01G5.5	96	61.502	Caenorhabditis_elegans
ENSFHEG00000004627	dkc1	85	80.455	ENSCJAG00000004210	DKC1	85	80.455	Callithrix_jacchus
ENSFHEG00000004627	dkc1	88	79.007	ENSCAFG00000019620	-	86	78.125	Canis_familiaris
ENSFHEG00000004627	dkc1	88	71.267	ENSCAFG00000009311	-	83	73.759	Canis_familiaris
ENSFHEG00000004627	dkc1	88	79.007	ENSCAFG00020008918	-	86	78.125	Canis_lupus_dingo
ENSFHEG00000004627	dkc1	83	73.317	ENSCAFG00020009379	-	79	73.317	Canis_lupus_dingo
ENSFHEG00000004627	dkc1	89	78.664	ENSCHIG00000017392	DKC1	87	80.726	Capra_hircus
ENSFHEG00000004627	dkc1	85	78.271	ENSTSYG00000007681	DKC1	88	77.106	Carlito_syrichta
ENSFHEG00000004627	dkc1	80	81.327	ENSCAPG00000003342	DKC1	92	81.436	Cavia_aperea
ENSFHEG00000004627	dkc1	89	78.233	ENSCPOG00000008825	DKC1	86	80.045	Cavia_porcellus
ENSFHEG00000004627	dkc1	89	68.966	ENSCCAG00000027418	DKC1	84	70.522	Cebus_capucinus
ENSFHEG00000004627	dkc1	89	77.802	ENSCATG00000033602	DKC1	86	79.819	Cercocebus_atys
ENSFHEG00000004627	dkc1	85	79.592	ENSCLAG00000000720	DKC1	87	79.954	Chinchilla_lanigera
ENSFHEG00000004627	dkc1	89	78.017	ENSCSAG00000006706	DKC1	86	80.045	Chlorocebus_sabaeus
ENSFHEG00000004627	dkc1	91	77.516	ENSCPBG00000005858	DKC1	87	84.352	Chrysemys_picta_bellii
ENSFHEG00000004627	dkc1	79	79.699	ENSCING00000004599	-	82	75.632	Ciona_intestinalis
ENSFHEG00000004627	dkc1	78	80.256	ENSCSAVG00000010047	-	94	75.837	Ciona_savignyi
ENSFHEG00000004627	dkc1	89	78.017	ENSCANG00000027987	DKC1	86	80.045	Colobus_angolensis_palliatus
ENSFHEG00000004627	dkc1	91	57.930	ENSCGRG00001016789	-	88	57.500	Cricetulus_griseus_chok1gshd
ENSFHEG00000004627	dkc1	86	80.135	ENSCGRG00001014574	-	86	80.499	Cricetulus_griseus_chok1gshd
ENSFHEG00000004627	dkc1	99	55.466	ENSCGRG00000014809	-	87	60.287	Cricetulus_griseus_crigri
ENSFHEG00000004627	dkc1	86	80.135	ENSCGRG00000016075	-	86	80.499	Cricetulus_griseus_crigri
ENSFHEG00000004627	dkc1	94	85.115	ENSCSEG00000012633	dkc1	89	87.559	Cynoglossus_semilaevis
ENSFHEG00000004627	dkc1	87	93.793	ENSCVAG00000010155	dkc1	84	95.082	Cyprinodon_variegatus
ENSFHEG00000004627	dkc1	86	88.889	ENSDARG00000016484	dkc1	87	87.982	Danio_rerio
ENSFHEG00000004627	dkc1	89	78.233	ENSDNOG00000004218	DKC1	86	80.272	Dasypus_novemcinctus
ENSFHEG00000004627	dkc1	59	68.333	ENSDORG00000013566	-	90	71.168	Dipodomys_ordii
ENSFHEG00000004627	dkc1	91	65.284	FBgn0259937	Nop60B	87	67.172	Drosophila_melanogaster
ENSFHEG00000004627	dkc1	79	83.838	ENSETEG00000016095	DKC1	80	83.838	Echinops_telfairi
ENSFHEG00000004627	dkc1	66	75.988	ENSEBUG00000015962	dkc1	98	80.756	Eptatretus_burgeri
ENSFHEG00000004627	dkc1	89	76.160	ENSEASG00005007484	DKC1	86	78.049	Equus_asinus_asinus
ENSFHEG00000004627	dkc1	89	76.160	ENSECAG00000023524	DKC1	86	78.049	Equus_caballus
ENSFHEG00000004627	dkc1	78	86.889	ENSEEUG00000003323	DKC1	98	82.692	Erinaceus_europaeus
ENSFHEG00000004627	dkc1	90	85.746	ENSELUG00000014538	dkc1	90	86.123	Esox_lucius
ENSFHEG00000004627	dkc1	88	78.166	ENSFCAG00000006577	DKC1	90	78.525	Felis_catus
ENSFHEG00000004627	dkc1	85	82.045	ENSFALG00000011496	DKC1	85	82.022	Ficedula_albicollis
ENSFHEG00000004627	dkc1	91	77.293	ENSFDAG00000002516	DKC1	86	80.886	Fukomys_damarensis
ENSFHEG00000004627	dkc1	78	88.747	ENSGMOG00000017277	dkc1	100	88.747	Gadus_morhua
ENSFHEG00000004627	dkc1	88	80.266	ENSGALG00000005054	DKC1	84	82.258	Gallus_gallus
ENSFHEG00000004627	dkc1	90	94.000	ENSGAFG00000011486	dkc1	77	94.183	Gambusia_affinis
ENSFHEG00000004627	dkc1	79	91.709	ENSGACG00000004373	dkc1	96	93.617	Gasterosteus_aculeatus
ENSFHEG00000004627	dkc1	91	78.158	ENSGAGG00000011330	DKC1	84	82.151	Gopherus_agassizii
ENSFHEG00000004627	dkc1	89	78.233	ENSGGOG00000001045	DKC1	86	80.272	Gorilla_gorilla
ENSFHEG00000004627	dkc1	97	88.501	ENSHBUG00000012436	dkc1	90	89.310	Haplochromis_burtoni
ENSFHEG00000004627	dkc1	88	77.223	ENSHGLG00000000649	DKC1	85	79.592	Heterocephalus_glaber_female
ENSFHEG00000004627	dkc1	83	80.374	ENSHGLG00100001153	DKC1	86	79.592	Heterocephalus_glaber_male
ENSFHEG00000004627	dkc1	96	85.062	ENSHCOG00000021099	dkc1	85	89.277	Hippocampus_comes
ENSFHEG00000004627	dkc1	89	85.120	ENSIPUG00000010309	dkc1	88	84.902	Ictalurus_punctatus
ENSFHEG00000004627	dkc1	89	71.744	ENSSTOG00000020149	-	84	74.178	Ictidomys_tridecemlineatus
ENSFHEG00000004627	dkc1	86	79.054	ENSSTOG00000001074	-	91	79.412	Ictidomys_tridecemlineatus
ENSFHEG00000004627	dkc1	89	67.167	ENSSTOG00000011904	-	82	68.623	Ictidomys_tridecemlineatus
ENSFHEG00000004627	dkc1	55	70.758	ENSJJAG00000010086	-	92	70.758	Jaculus_jaculus
ENSFHEG00000004627	dkc1	89	88.839	ENSKMAG00000008010	dkc1	90	88.814	Kryptolebias_marmoratus
ENSFHEG00000004627	dkc1	85	90.164	ENSLBEG00000019122	dkc1	92	89.310	Labrus_bergylta
ENSFHEG00000004627	dkc1	99	76.331	ENSLACG00000014025	DKC1	90	86.616	Latimeria_chalumnae
ENSFHEG00000004627	dkc1	91	85.652	ENSLOCG00000013713	dkc1	88	88.626	Lepisosteus_oculatus
ENSFHEG00000004627	dkc1	96	74.395	ENSLAFG00000000221	DKC1	93	75.208	Loxodonta_africana
ENSFHEG00000004627	dkc1	89	77.802	ENSMFAG00000032398	DKC1	74	79.819	Macaca_fascicularis
ENSFHEG00000004627	dkc1	89	78.017	ENSMMUG00000005768	DKC1	86	80.045	Macaca_mulatta
ENSFHEG00000004627	dkc1	89	78.017	ENSMNEG00000034503	DKC1	86	80.045	Macaca_nemestrina
ENSFHEG00000004627	dkc1	89	78.017	ENSMLEG00000034422	DKC1	86	80.045	Mandrillus_leucophaeus
ENSFHEG00000004627	dkc1	80	93.300	ENSMAMG00000005427	dkc1	89	93.939	Mastacembelus_armatus
ENSFHEG00000004627	dkc1	97	88.706	ENSMZEG00005014503	dkc1	90	89.532	Maylandia_zebra
ENSFHEG00000004627	dkc1	77	84.383	ENSMGAG00000009238	DKC1	87	84.250	Meleagris_gallopavo
ENSFHEG00000004627	dkc1	55	71.168	ENSMAUG00000016454	-	90	71.168	Mesocricetus_auratus
ENSFHEG00000004627	dkc1	79	73.105	ENSMICG00000002818	-	99	75.890	Microcebus_murinus
ENSFHEG00000004627	dkc1	83	81.905	ENSMICG00000038751	-	79	84.383	Microcebus_murinus
ENSFHEG00000004627	dkc1	55	68.978	ENSMOCG00000001169	-	90	68.978	Microtus_ochrogaster
ENSFHEG00000004627	dkc1	82	91.932	ENSMMOG00000020348	dkc1	86	92.172	Mola_mola
ENSFHEG00000004627	dkc1	83	81.647	ENSMODG00000009243	DKC1	74	82.033	Monodelphis_domestica
ENSFHEG00000004627	dkc1	96	86.071	ENSMALG00000009454	dkc1	84	89.070	Monopterus_albus
ENSFHEG00000004627	dkc1	85	69.196	MGP_CAROLIEiJ_G0033191	Dkc1	85	80.800	Mus_caroli
ENSFHEG00000004627	dkc1	85	80.137	ENSMUSG00000031403	Dkc1	86	80.137	Mus_musculus
ENSFHEG00000004627	dkc1	84	80.275	MGP_PahariEiJ_G0031735	Dkc1	85	80.275	Mus_pahari
ENSFHEG00000004627	dkc1	85	80.137	MGP_SPRETEiJ_G0034351	Dkc1	85	80.137	Mus_spretus
ENSFHEG00000004627	dkc1	85	78.571	ENSMPUG00000016136	DKC1	90	73.293	Mustela_putorius_furo
ENSFHEG00000004627	dkc1	89	74.518	ENSMLUG00000011918	DKC1	85	75.901	Myotis_lucifugus
ENSFHEG00000004627	dkc1	59	68.562	ENSNGAG00000015724	-	92	70.758	Nannospalax_galili
ENSFHEG00000004627	dkc1	79	93.703	ENSNBRG00000005638	dkc1	80	94.162	Neolamprologus_brichardi
ENSFHEG00000004627	dkc1	89	78.017	ENSNLEG00000014323	DKC1	86	80.045	Nomascus_leucogenys
ENSFHEG00000004627	dkc1	84	77.594	ENSMEUG00000001066	DKC1	92	78.520	Notamacropus_eugenii
ENSFHEG00000004627	dkc1	69	79.420	ENSOPRG00000005248	DKC1	69	79.420	Ochotona_princeps
ENSFHEG00000004627	dkc1	56	69.892	ENSODEG00000000549	-	91	70.397	Octodon_degus
ENSFHEG00000004627	dkc1	79	86.650	ENSODEG00000011816	-	85	82.028	Octodon_degus
ENSFHEG00000004627	dkc1	97	89.117	ENSONIG00000013889	dkc1	97	84.891	Oreochromis_niloticus
ENSFHEG00000004627	dkc1	83	82.243	ENSOANG00000008713	-	88	82.243	Ornithorhynchus_anatinus
ENSFHEG00000004627	dkc1	56	63.907	ENSOANG00000022295	-	84	64.570	Ornithorhynchus_anatinus
ENSFHEG00000004627	dkc1	85	79.909	ENSOCUG00000012646	DKC1	85	80.046	Oryctolagus_cuniculus
ENSFHEG00000004627	dkc1	90	85.651	ENSORLG00000018748	dkc1	84	86.977	Oryzias_latipes
ENSFHEG00000004627	dkc1	89	87.416	ENSOMEG00000005786	dkc1	82	89.540	Oryzias_melastigma
ENSFHEG00000004627	dkc1	85	77.827	ENSOGAG00000003399	DKC1	86	77.827	Otolemur_garnettii
ENSFHEG00000004627	dkc1	86	80.587	ENSOARG00000003047	DKC1	87	80.952	Ovis_aries
ENSFHEG00000004627	dkc1	89	77.802	ENSPPAG00000023820	DKC1	86	80.499	Pan_paniscus
ENSFHEG00000004627	dkc1	88	78.384	ENSPPRG00000009104	DKC1	90	78.525	Panthera_pardus
ENSFHEG00000004627	dkc1	85	82.009	ENSPTIG00000017469	DKC1	85	82.394	Panthera_tigris_altaica
ENSFHEG00000004627	dkc1	89	78.233	ENSPTRG00000022449	DKC1	86	80.272	Pan_troglodytes
ENSFHEG00000004627	dkc1	89	78.233	ENSPTRG00000043416	-	74	80.272	Pan_troglodytes
ENSFHEG00000004627	dkc1	89	78.017	ENSPANG00000011978	DKC1	86	80.045	Papio_anubis
ENSFHEG00000004627	dkc1	85	86.279	ENSPKIG00000008443	dkc1	91	85.450	Paramormyrops_kingsleyae
ENSFHEG00000004627	dkc1	71	88.547	ENSPSIG00000013765	DKC1	86	88.827	Pelodiscus_sinensis
ENSFHEG00000004627	dkc1	78	87.532	ENSPMGG00000004097	dkc1	72	87.532	Periophthalmus_magnuspinnatus
ENSFHEG00000004627	dkc1	69	82.873	ENSPEMG00000013348	Dkc1	82	85.057	Peromyscus_maniculatus_bairdii
ENSFHEG00000004627	dkc1	79	86.041	ENSPCIG00000016706	DKC1	72	81.967	Phascolarctos_cinereus
ENSFHEG00000004627	dkc1	90	94.667	ENSPFOG00000018653	dkc1	89	94.855	Poecilia_formosa
ENSFHEG00000004627	dkc1	90	94.667	ENSPLAG00000003272	dkc1	81	94.855	Poecilia_latipinna
ENSFHEG00000004627	dkc1	90	94.444	ENSPMEG00000010413	dkc1	89	94.631	Poecilia_mexicana
ENSFHEG00000004627	dkc1	90	94.222	ENSPREG00000004100	dkc1	85	92.130	Poecilia_reticulata
ENSFHEG00000004627	dkc1	85	80.272	ENSPPYG00000020892	DKC1	86	80.272	Pongo_abelii
ENSFHEG00000004627	dkc1	72	87.328	ENSPCAG00000015034	DKC1	72	86.376	Procavia_capensis
ENSFHEG00000004627	dkc1	85	80.137	ENSPCOG00000026874	DKC1	85	80.137	Propithecus_coquereli
ENSFHEG00000004627	dkc1	85	81.250	ENSPVAG00000009222	DKC1	86	80.886	Pteropus_vampyrus
ENSFHEG00000004627	dkc1	93	86.250	ENSPNYG00000020063	dkc1	88	87.783	Pundamilia_nyererei
ENSFHEG00000004627	dkc1	90	83.878	ENSPNAG00000005780	dkc1	84	87.059	Pygocentrus_nattereri
ENSFHEG00000004627	dkc1	89	75.269	ENSRNOG00000055562	Dkc1	86	77.626	Rattus_norvegicus
ENSFHEG00000004627	dkc1	89	78.017	ENSRBIG00000028457	DKC1	74	80.045	Rhinopithecus_bieti
ENSFHEG00000004627	dkc1	89	78.017	ENSRROG00000044780	DKC1	86	80.045	Rhinopithecus_roxellana
ENSFHEG00000004627	dkc1	76	70.496	YLR175W	-	93	63.556	Saccharomyces_cerevisiae
ENSFHEG00000004627	dkc1	85	80.272	ENSSBOG00000033746	DKC1	85	80.272	Saimiri_boliviensis_boliviensis
ENSFHEG00000004627	dkc1	91	77.462	ENSSHAG00000002463	DKC1	92	80.690	Sarcophilus_harrisii
ENSFHEG00000004627	dkc1	90	84.565	ENSSFOG00015009585	dkc1	89	85.088	Scleropages_formosus
ENSFHEG00000004627	dkc1	89	87.500	ENSSMAG00000002552	dkc1	88	87.500	Scophthalmus_maximus
ENSFHEG00000004627	dkc1	85	90.654	ENSSDUG00000009963	dkc1	89	89.087	Seriola_dumerili
ENSFHEG00000004627	dkc1	93	85.345	ENSSLDG00000019342	dkc1	92	86.404	Seriola_lalandi_dorsalis
ENSFHEG00000004627	dkc1	85	74.943	ENSSARG00000001822	DKC1	87	75.515	Sorex_araneus
ENSFHEG00000004627	dkc1	86	79.075	ENSSPUG00000018907	DKC1	86	79.601	Sphenodon_punctatus
ENSFHEG00000004627	dkc1	93	87.420	ENSSPAG00000002585	dkc1	81	89.953	Stegastes_partitus
ENSFHEG00000004627	dkc1	80	84.962	ENSSSCG00000012823	DKC1	85	83.902	Sus_scrofa
ENSFHEG00000004627	dkc1	78	86.181	ENSTGUG00000006781	DKC1	90	84.938	Taeniopygia_guttata
ENSFHEG00000004627	dkc1	92	83.051	ENSTRUG00000004413	dkc1	86	88.732	Takifugu_rubripes
ENSFHEG00000004627	dkc1	90	68.467	ENSTNIG00000002582	dkc1	86	69.683	Tetraodon_nigroviridis
ENSFHEG00000004627	dkc1	57	80.936	ENSTBEG00000011262	DKC1	85	79.935	Tupaia_belangeri
ENSFHEG00000004627	dkc1	55	85.560	ENSTTRG00000008089	DKC1	55	85.560	Tursiops_truncatus
ENSFHEG00000004627	dkc1	88	79.318	ENSUAMG00000022721	DKC1	87	82.850	Ursus_americanus
ENSFHEG00000004627	dkc1	94	75.053	ENSUMAG00000016899	DKC1	96	84.264	Ursus_maritimus
ENSFHEG00000004627	dkc1	79	71.033	ENSVVUG00000021671	-	73	71.033	Vulpes_vulpes
ENSFHEG00000004627	dkc1	89	77.212	ENSVVUG00000020734	-	70	83.663	Vulpes_vulpes
ENSFHEG00000004627	dkc1	94	79.579	ENSXETG00000032517	DKC1	85	85.012	Xenopus_tropicalis
ENSFHEG00000004627	dkc1	87	92.202	ENSXCOG00000005498	dkc1	92	92.558	Xiphophorus_couchianus
ENSFHEG00000004627	dkc1	90	94.000	ENSXMAG00000004919	dkc1	90	94.183	Xiphophorus_maculatus