EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSFHEG00000004709 (Gene tree)
Gene ID: 105924093
Gene Symbol: slirp
Alias: sb:cb657|si:ch73-276n11.1
Full Name: SRA stem-loop interacting RNA binding protein
Gene Type: protein_coding
Species: Fundulus_heteroclitus
Status: putative
Strand: Plus strand
Length: 808 bases
Position: chrKN808324.1:1098-1905
Accession: 105924093
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSFHEP00000003813	RRM_1	PF00076.22	1.5e-10	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSFHET00000009911	-	279	XM_012859986	ENSFHEP00000003813	92 (aa)	XP_012715440	-

Gene Model

Click here to download ENSFHEG00000004709's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSFHEG00000004709's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSFHEG00000004709	slirp	83	57.895	ENSG00000119705	SLIRP	80	62.295	Homo_sapiens
ENSFHEG00000004709	slirp	85	78.205	ENSAPOG00000001298	slirp	78	78.205	Acanthochromis_polyacanthus
ENSFHEG00000004709	slirp	66	52.459	ENSAMEG00000003975	SLIRP	67	52.459	Ailuropoda_melanoleuca
ENSFHEG00000004709	slirp	87	76.250	ENSACIG00000023083	slirp	79	76.250	Amphilophus_citrinellus
ENSFHEG00000004709	slirp	85	78.205	ENSAOCG00000006342	slirp	79	78.205	Amphiprion_ocellaris
ENSFHEG00000004709	slirp	85	78.205	ENSAPEG00000015917	slirp	79	78.205	Amphiprion_percula
ENSFHEG00000004709	slirp	84	77.922	ENSAPEG00000015719	-	79	77.922	Amphiprion_percula
ENSFHEG00000004709	slirp	80	75.676	ENSATEG00000013525	slirp	74	75.676	Anabas_testudineus
ENSFHEG00000004709	slirp	83	63.158	ENSAMXG00000018693	slirp	76	63.158	Astyanax_mexicanus
ENSFHEG00000004709	slirp	71	60.000	ENSCJAG00000016946	SLIRP	62	58.621	Callithrix_jacchus
ENSFHEG00000004709	slirp	86	50.617	ENSCAFG00020015876	-	73	50.617	Canis_lupus_dingo
ENSFHEG00000004709	slirp	71	55.385	ENSCCAG00000030130	SLIRP	60	55.385	Cebus_capucinus
ENSFHEG00000004709	slirp	73	59.701	ENSCATG00000036327	SLIRP	62	62.069	Cercocebus_atys
ENSFHEG00000004709	slirp	71	60.000	ENSCSAG00000011736	SLIRP	60	60.000	Chlorocebus_sabaeus
ENSFHEG00000004709	slirp	66	60.656	ENSCPBG00000026327	SLIRP	62	60.656	Chrysemys_picta_bellii
ENSFHEG00000004709	slirp	68	60.938	ENSCANG00000032892	SLIRP	56	65.455	Colobus_angolensis_palliatus
ENSFHEG00000004709	slirp	86	48.148	ENSCGRG00001024068	Slirp	73	48.148	Cricetulus_griseus_chok1gshd
ENSFHEG00000004709	slirp	86	48.148	ENSCGRG00000017440	Slirp	73	48.148	Cricetulus_griseus_crigri
ENSFHEG00000004709	slirp	78	54.795	ENSCSEG00000015766	slirp	74	54.795	Cynoglossus_semilaevis
ENSFHEG00000004709	slirp	64	84.746	ENSCVAG00000012504	slirp	58	84.746	Cyprinodon_variegatus
ENSFHEG00000004709	slirp	82	77.333	ENSDARG00000097753	slirp	73	77.333	Danio_rerio
ENSFHEG00000004709	slirp	83	46.753	ENSDNOG00000007721	SLIRP	70	46.753	Dasypus_novemcinctus
ENSFHEG00000004709	slirp	83	47.436	ENSDORG00000012379	Slirp	70	47.436	Dipodomys_ordii
ENSFHEG00000004709	slirp	68	57.143	ENSETEG00000010345	SLIRP	58	57.143	Echinops_telfairi
ENSFHEG00000004709	slirp	71	56.923	ENSEASG00005020193	SLIRP	59	56.923	Equus_asinus_asinus
ENSFHEG00000004709	slirp	79	56.757	ENSEEUG00000007257	SLIRP	73	56.757	Erinaceus_europaeus
ENSFHEG00000004709	slirp	80	79.730	ENSELUG00000016800	slirp	73	79.730	Esox_lucius
ENSFHEG00000004709	slirp	63	55.172	ENSFCAG00000036326	SLIRP	59	55.172	Felis_catus
ENSFHEG00000004709	slirp	65	58.333	ENSFALG00000012583	SLIRP	68	52.778	Ficedula_albicollis
ENSFHEG00000004709	slirp	79	53.333	ENSFDAG00000008347	SLIRP	66	53.333	Fukomys_damarensis
ENSFHEG00000004709	slirp	84	71.429	ENSGMOG00000016948	slirp	74	71.429	Gadus_morhua
ENSFHEG00000004709	slirp	76	58.571	ENSGALG00000031238	SLIRP	67	58.571	Gallus_gallus
ENSFHEG00000004709	slirp	85	85.897	ENSGAFG00000010998	slirp	78	85.897	Gambusia_affinis
ENSFHEG00000004709	slirp	65	76.667	ENSGACG00000020137	slirp	70	76.667	Gasterosteus_aculeatus
ENSFHEG00000004709	slirp	82	61.842	ENSGAGG00000009953	SLIRP	52	61.842	Gopherus_agassizii
ENSFHEG00000004709	slirp	83	57.895	ENSGGOG00000011059	-	69	57.895	Gorilla_gorilla
ENSFHEG00000004709	slirp	64	54.237	ENSHGLG00000018491	SLIRP	53	54.237	Heterocephalus_glaber_female
ENSFHEG00000004709	slirp	64	54.237	ENSHGLG00100014153	SLIRP	53	54.237	Heterocephalus_glaber_male
ENSFHEG00000004709	slirp	80	82.432	ENSHCOG00000006795	slirp	75	82.432	Hippocampus_comes
ENSFHEG00000004709	slirp	84	75.325	ENSIPUG00000010214	SLIRP	77	75.325	Ictalurus_punctatus
ENSFHEG00000004709	slirp	72	51.515	ENSSTOG00000034316	SLIRP	59	51.515	Ictidomys_tridecemlineatus
ENSFHEG00000004709	slirp	87	68.750	ENSKMAG00000002038	slirp	77	68.750	Kryptolebias_marmoratus
ENSFHEG00000004709	slirp	85	76.923	ENSLBEG00000007564	slirp	78	76.923	Labrus_bergylta
ENSFHEG00000004709	slirp	85	66.667	ENSLACG00000013434	SLIRP	75	66.667	Latimeria_chalumnae
ENSFHEG00000004709	slirp	71	60.000	ENSMFAG00000042960	SLIRP	62	62.069	Macaca_fascicularis
ENSFHEG00000004709	slirp	80	56.757	ENSMMUG00000029256	SLIRP	62	62.069	Macaca_mulatta
ENSFHEG00000004709	slirp	71	60.000	ENSMNEG00000028921	SLIRP	62	62.069	Macaca_nemestrina
ENSFHEG00000004709	slirp	63	62.069	ENSMLEG00000043644	SLIRP	59	62.069	Mandrillus_leucophaeus
ENSFHEG00000004709	slirp	87	83.750	ENSMZEG00005004617	slirp	81	83.750	Maylandia_zebra
ENSFHEG00000004709	slirp	83	52.564	ENSMAUG00000003857	Slirp	70	52.564	Mesocricetus_auratus
ENSFHEG00000004709	slirp	73	56.716	ENSMICG00000012080	SLIRP	64	54.237	Microcebus_murinus
ENSFHEG00000004709	slirp	67	54.839	ENSMOCG00000016019	Slirp	60	52.459	Microtus_ochrogaster
ENSFHEG00000004709	slirp	87	75.000	ENSMMOG00000018268	slirp	80	75.000	Mola_mola
ENSFHEG00000004709	slirp	62	57.895	ENSMODG00000005207	-	80	57.895	Monodelphis_domestica
ENSFHEG00000004709	slirp	80	72.973	ENSMALG00000012581	slirp	76	72.973	Monopterus_albus
ENSFHEG00000004709	slirp	71	56.923	MGP_CAROLIEiJ_G0017995	Slirp	60	56.923	Mus_caroli
ENSFHEG00000004709	slirp	86	48.750	ENSMUSG00000021040	Slirp	71	48.750	Mus_musculus
ENSFHEG00000004709	slirp	86	48.750	MGP_SPRETEiJ_G0018840	Slirp	71	48.750	Mus_spretus
ENSFHEG00000004709	slirp	67	59.677	ENSMLUG00000029544	-	55	59.677	Myotis_lucifugus
ENSFHEG00000004709	slirp	67	61.290	ENSMLUG00000024998	-	56	61.290	Myotis_lucifugus
ENSFHEG00000004709	slirp	83	45.455	ENSNGAG00000016363	Slirp	74	45.455	Nannospalax_galili
ENSFHEG00000004709	slirp	83	51.316	ENSNLEG00000032459	-	69	51.316	Nomascus_leucogenys
ENSFHEG00000004709	slirp	79	53.425	ENSNLEG00000027238	-	66	59.649	Nomascus_leucogenys
ENSFHEG00000004709	slirp	86	49.383	ENSODEG00000012580	SLIRP	66	55.738	Octodon_degus
ENSFHEG00000004709	slirp	87	82.500	ENSONIG00000011692	slirp	81	82.500	Oreochromis_niloticus
ENSFHEG00000004709	slirp	67	69.355	ENSOANG00000022366	SLIRP	56	69.355	Ornithorhynchus_anatinus
ENSFHEG00000004709	slirp	87	77.500	ENSORLG00000010761	slirp	62	77.500	Oryzias_latipes
ENSFHEG00000004709	slirp	87	76.250	ENSORLG00020022188	slirp	80	76.250	Oryzias_latipes_hni
ENSFHEG00000004709	slirp	87	78.750	ENSORLG00015020171	slirp	79	78.750	Oryzias_latipes_hsok
ENSFHEG00000004709	slirp	87	80.000	ENSOMEG00000019321	slirp	80	80.000	Oryzias_melastigma
ENSFHEG00000004709	slirp	83	59.211	ENSPPAG00000040710	-	69	59.211	Pan_paniscus
ENSFHEG00000004709	slirp	63	55.172	ENSPPRG00000014350	SLIRP	59	55.172	Panthera_pardus
ENSFHEG00000004709	slirp	63	55.172	ENSPTIG00000014196	SLIRP	59	55.172	Panthera_tigris_altaica
ENSFHEG00000004709	slirp	83	57.895	ENSPTRG00000030691	SLIRP	71	57.895	Pan_troglodytes
ENSFHEG00000004709	slirp	71	61.538	ENSPANG00000026323	SLIRP	62	63.793	Papio_anubis
ENSFHEG00000004709	slirp	76	67.532	ENSPKIG00000008831	slirp	76	67.532	Paramormyrops_kingsleyae
ENSFHEG00000004709	slirp	65	81.667	ENSPMGG00000010541	slirp	69	81.667	Periophthalmus_magnuspinnatus
ENSFHEG00000004709	slirp	79	51.316	ENSPEMG00000013234	Slirp	67	51.316	Peromyscus_maniculatus_bairdii
ENSFHEG00000004709	slirp	67	58.065	ENSPMAG00000009355	slirp	69	58.065	Petromyzon_marinus
ENSFHEG00000004709	slirp	62	63.158	ENSPCIG00000026842	-	61	63.158	Phascolarctos_cinereus
ENSFHEG00000004709	slirp	84	84.416	ENSPFOG00000006758	slirp	77	84.416	Poecilia_formosa
ENSFHEG00000004709	slirp	84	85.714	ENSPLAG00000011140	slirp	77	85.714	Poecilia_latipinna
ENSFHEG00000004709	slirp	84	84.416	ENSPMEG00000019535	slirp	77	84.416	Poecilia_mexicana
ENSFHEG00000004709	slirp	84	84.416	ENSPREG00000011673	slirp	77	84.416	Poecilia_reticulata
ENSFHEG00000004709	slirp	63	65.517	ENSPPYG00000006030	SLIRP	56	62.295	Pongo_abelii
ENSFHEG00000004709	slirp	85	48.718	ENSPCOG00000015159	SLIRP	64	51.724	Propithecus_coquereli
ENSFHEG00000004709	slirp	83	76.316	ENSPNAG00000008633	slirp	77	76.316	Pygocentrus_nattereri
ENSFHEG00000004709	slirp	86	56.962	ENSRBIG00000032222	-	72	56.962	Rhinopithecus_bieti
ENSFHEG00000004709	slirp	61	66.071	ENSRBIG00000031396	-	56	66.071	Rhinopithecus_bieti
ENSFHEG00000004709	slirp	83	51.316	ENSRBIG00000035817	-	69	51.316	Rhinopithecus_bieti
ENSFHEG00000004709	slirp	60	65.455	ENSRBIG00000032998	-	50	65.455	Rhinopithecus_bieti
ENSFHEG00000004709	slirp	61	64.286	ENSRROG00000035604	-	56	64.286	Rhinopithecus_roxellana
ENSFHEG00000004709	slirp	86	56.962	ENSRROG00000036656	-	72	56.962	Rhinopithecus_roxellana
ENSFHEG00000004709	slirp	67	64.516	ENSRROG00000041312	-	61	64.516	Rhinopithecus_roxellana
ENSFHEG00000004709	slirp	63	63.793	ENSRROG00000017133	-	60	63.793	Rhinopithecus_roxellana
ENSFHEG00000004709	slirp	63	60.345	ENSSBOG00000020014	SLIRP	62	60.345	Saimiri_boliviensis_boliviensis
ENSFHEG00000004709	slirp	73	67.164	ENSSFOG00015011165	slirp	68	67.164	Scleropages_formosus
ENSFHEG00000004709	slirp	87	48.780	ENSSMAG00000012930	slirp	80	48.780	Scophthalmus_maximus
ENSFHEG00000004709	slirp	85	79.487	ENSSDUG00000021883	slirp	51	79.487	Seriola_dumerili
ENSFHEG00000004709	slirp	85	79.487	ENSSLDG00000023136	slirp	71	79.487	Seriola_lalandi_dorsalis
ENSFHEG00000004709	slirp	64	71.186	ENSSPUG00000009346	SLIRP	60	71.186	Sphenodon_punctatus
ENSFHEG00000004709	slirp	85	65.385	ENSSPAG00000013477	slirp	78	65.385	Stegastes_partitus
ENSFHEG00000004709	slirp	83	48.052	ENSSSCG00000028167	SLIRP	69	48.052	Sus_scrofa
ENSFHEG00000004709	slirp	65	58.333	ENSTGUG00000012337	SLIRP	70	50.000	Taeniopygia_guttata
ENSFHEG00000004709	slirp	70	76.562	ENSTRUG00000020127	slirp	63	76.562	Takifugu_rubripes
ENSFHEG00000004709	slirp	86	50.000	ENSUAMG00000022445	SLIRP	73	50.000	Ursus_americanus
ENSFHEG00000004709	slirp	73	53.731	ENSUMAG00000007166	SLIRP	59	53.731	Ursus_maritimus
ENSFHEG00000004709	slirp	79	54.054	ENSVPAG00000001781	SLIRP	69	54.054	Vicugna_pacos
ENSFHEG00000004709	slirp	73	56.716	ENSVVUG00000004436	SLIRP	59	56.716	Vulpes_vulpes
ENSFHEG00000004709	slirp	66	68.852	ENSXETG00000030343	SLIRP	69	68.852	Xenopus_tropicalis
ENSFHEG00000004709	slirp	85	83.333	ENSXCOG00000009422	slirp	78	83.333	Xiphophorus_couchianus
ENSFHEG00000004709	slirp	85	85.897	ENSXMAG00000015655	slirp	78	85.897	Xiphophorus_maculatus